RNA–Protein interactions for RNA: ENST00000624668.3

ATRX-217, Transcript of ATRX, chromatin remodeler, humanhuman

TSL 5

Gene ATRX, Length 583 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRX-217ENST00000624668 CRACR2BQ8N4Y2 399 aaPredicted RBP18.94■□□□□ 0.62
ATRX-217ENST00000624668 RIOK1Q9BRS2 568 aaKnown RBP18.94■□□□□ 0.62
ATRX-217ENST00000624668 DOCK3Q8IZD9 2030 aa18.94■□□□□ 0.62
ATRX-217ENST00000624668 DDX60LQ5H9U9 1706 aaKnown RBP18.94■□□□□ 0.62
ATRX-217ENST00000624668 APBB1O00213 710 aa18.93■□□□□ 0.62
ATRX-217ENST00000624668 INHAP05111 366 aa18.93■□□□□ 0.62
ATRX-217ENST00000624668 MYH1P12882 1939 aa18.93■□□□□ 0.62
ATRX-217ENST00000624668 HLA-DOAP06340 250 aa18.92■□□□□ 0.62
ATRX-217ENST00000624668 GCLCP48506 637 aaPredicted RBP18.92■□□□□ 0.62
ATRX-217ENST00000624668 UBXN2AP68543 259 aa18.92■□□□□ 0.62
ATRX-217ENST00000624668 EVX2Q03828 476 aa18.92■□□□□ 0.62
ATRX-217ENST00000624668 MAP3K12Q12852 859 aa18.92■□□□□ 0.62
ATRX-217ENST00000624668 HABP4Q5JVS0 413 aaKnown RBP18.92■□□□□ 0.62
ATRX-217ENST00000624668 POTEEQ6S8J3 1075 aa18.92■□□□□ 0.62
ATRX-217ENST00000624668 RPAP2Q8IXW5 612 aaPredicted RBP18.92■□□□□ 0.62
ATRX-217ENST00000624668 PXYLP1Q8TE99 480 aa18.92■□□□□ 0.62
ATRX-217ENST00000624668 U2AF1L4Q8WU68 220 aaKnown RBP18.92■□□□□ 0.62
ATRX-217ENST00000624668 TRIM34Q9BYJ4 488 aa18.92■□□□□ 0.62
ATRX-217ENST00000624668 TXNRD2Q9NNW7 524 aa18.92■□□□□ 0.62
ATRX-217ENST00000624668 GH2P01242 217 aa18.91■□□□□ 0.62
ATRX-217ENST00000624668 HOXA7P31268 230 aaPredicted RBP18.91■□□□□ 0.62
ATRX-217ENST00000624668 USP5P45974 858 aa18.91■□□□□ 0.62
ATRX-217ENST00000624668 PABPC4Q13310 644 aaKnown RBP eCLIP18.91■□□□□ 0.62
ATRX-217ENST00000624668 HSP90AB4PQ58FF6 505 aa18.91■□□□□ 0.62
ATRX-217ENST00000624668 TATDN1Q6P1N9 297 aa18.91■□□□□ 0.62
ATRX-217ENST00000624668 PIAS4Q8N2W9 510 aaPredicted RBP18.91■□□□□ 0.62
ATRX-217ENST00000624668 COA7Q96BR5 231 aa18.91■□□□□ 0.62
ATRX-217ENST00000624668 GCC1Q96CN9 775 aa18.91■□□□□ 0.62
ATRX-217ENST00000624668 EDC3Q96F86 508 aaKnown RBP18.91■□□□□ 0.62
ATRX-217ENST00000624668 P2RX7Q99572 595 aaKnown RBP18.91■□□□□ 0.62
ATRX-217ENST00000624668 MORF4L1Q9UBU8 362 aa18.91■□□□□ 0.62
ATRX-217ENST00000624668 GJD2Q9UKL4 321 aa18.91■□□□□ 0.62
ATRX-217ENST00000624668 DDX19BQ9UMR2 479 aa18.91■□□□□ 0.62
ATRX-217ENST00000624668 PLXNB2O15031 1838 aa18.9■□□□□ 0.62
ATRX-217ENST00000624668 USP17L10C9JJH3 530 aa18.9■□□□□ 0.62
ATRX-217ENST00000624668 H0YGN5 161 aa18.9■□□□□ 0.62
ATRX-217ENST00000624668 MS4A1P11836 297 aa18.9■□□□□ 0.62
ATRX-217ENST00000624668 PDE6AP16499 860 aa18.9■□□□□ 0.62
ATRX-217ENST00000624668 C20orf194Q5TEA3 1177 aa18.9■□□□□ 0.62
ATRX-217ENST00000624668 NKX2-3Q8TAU0 364 aa18.9■□□□□ 0.62
ATRX-217ENST00000624668 KIF1BPQ96EK5 621 aa18.9■□□□□ 0.62
ATRX-217ENST00000624668 EHD4Q9H223 541 aa18.9■□□□□ 0.62
ATRX-217ENST00000624668 EMILIN3Q9NT22 766 aa18.9■□□□□ 0.62
ATRX-217ENST00000624668 GINM1Q9NU53 330 aa18.9■□□□□ 0.62
ATRX-217ENST00000624668 TAOK2Q9UL54 1235 aa18.9■□□□□ 0.62
ATRX-217ENST00000624668 C19orf81C9J6K1 198 aa18.89■□□□□ 0.61
ATRX-217ENST00000624668 PLCD1P51178 756 aa18.89■□□□□ 0.61
ATRX-217ENST00000624668 HERVK_113P62684 666 aa18.89■□□□□ 0.61
ATRX-217ENST00000624668 IRX3P78415 501 aaPredicted RBP18.89■□□□□ 0.61
ATRX-217ENST00000624668 CERS3Q8IU89 383 aa18.89■□□□□ 0.61
ATRX-217ENST00000624668 CLASRPQ8N2M8 674 aaKnown RBP18.89■□□□□ 0.61
ATRX-217ENST00000624668 TMOD4Q9NZQ9 345 aa18.89■□□□□ 0.61
ATRX-217ENST00000624668 SERPINB13Q9UIV8 391 aa18.89■□□□□ 0.61
ATRX-217ENST00000624668 RCAN3Q9UKA8 241 aa18.89■□□□□ 0.61
ATRX-217ENST00000624668 TCRBV5S4A2TA0A5A2 114 aa18.88■□□□□ 0.61
ATRX-217ENST00000624668 GOLIM4O00461 696 aa18.88■□□□□ 0.61
ATRX-217ENST00000624668 SGPL1O95470 568 aa18.88■□□□□ 0.61
ATRX-217ENST00000624668 TRIM32Q13049 653 aa18.88■□□□□ 0.61
ATRX-217ENST00000624668 SLFNL1Q499Z3 407 aa18.88■□□□□ 0.61
ATRX-217ENST00000624668 SLC9C2Q5TAH2 1124 aa18.88■□□□□ 0.61
ATRX-217ENST00000624668 TMED8Q6PL24 325 aaPredicted RBP18.88■□□□□ 0.61
ATRX-217ENST00000624668 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.88■□□□□ 0.61
ATRX-217ENST00000624668 DNAJC2Q99543 621 aaKnown RBP18.88■□□□□ 0.61
ATRX-217ENST00000624668 BCL11AQ9H165 835 aa18.88■□□□□ 0.61
ATRX-217ENST00000624668 PAK6Q9NQU5 681 aaPredicted RBP18.88■□□□□ 0.61
ATRX-217ENST00000624668 RBPJLQ9UBG7 517 aa18.88■□□□□ 0.61
ATRX-217ENST00000624668 COLQQ9Y215 455 aaPredicted RBP18.88■□□□□ 0.61
ATRX-217ENST00000624668 ZNF532Q9HCE3 1301 aa18.88■□□□□ 0.61
ATRX-217ENST00000624668 SZT2Q5T011 3432 aa18.88■□□□□ 0.61
ATRX-217ENST00000624668 MAGEB6P1A0A0J9YX57 407 aa18.87■□□□□ 0.61
ATRX-217ENST00000624668 SHMT1P34896 483 aa18.87■□□□□ 0.61
ATRX-217ENST00000624668 TTF1Q15361 905 aaPredicted RBP18.87■□□□□ 0.61
ATRX-217ENST00000624668 NAV1Q8NEY1 1877 aa18.87■□□□□ 0.61
ATRX-217ENST00000624668 DEFB118Q96PH6 123 aa18.87■□□□□ 0.61
ATRX-217ENST00000624668 HMMRO75330 724 aa18.86■□□□□ 0.61
ATRX-217ENST00000624668 IFIT2P09913 472 aaKnown RBP18.86■□□□□ 0.61
ATRX-217ENST00000624668 GUCY1A2P33402 732 aa18.86■□□□□ 0.61
ATRX-217ENST00000624668 GABPAQ06546 454 aa18.86■□□□□ 0.61
ATRX-217ENST00000624668 ZYXQ15942 572 aaKnown RBP18.86■□□□□ 0.61
ATRX-217ENST00000624668 Q3C1V9 767 aa18.86■□□□□ 0.61
ATRX-217ENST00000624668 TTC6Q86TZ1 520 aa18.86■□□□□ 0.61
ATRX-217ENST00000624668 LCORLQ8N3X6 602 aa18.86■□□□□ 0.61
ATRX-217ENST00000624668 ACER1Q8TDN7 264 aa18.86■□□□□ 0.61
ATRX-217ENST00000624668 RAB11FIP3O75154 756 aa18.85■□□□□ 0.61
ATRX-217ENST00000624668 FARP2O94887 1054 aaPredicted RBP18.85■□□□□ 0.61
ATRX-217ENST00000624668 CHGBP05060 677 aa18.85■□□□□ 0.61
ATRX-217ENST00000624668 USP17L2Q6R6M4 530 aa18.85■□□□□ 0.61
ATRX-217ENST00000624668 C12orf42Q96LP6 360 aa18.85■□□□□ 0.61
ATRX-217ENST00000624668 CRISPLD2Q9H0B8 497 aa18.85■□□□□ 0.61
ATRX-217ENST00000624668 PORCNQ9H237 461 aa18.85■□□□□ 0.61
ATRX-217ENST00000624668 HMGCRP04035 888 aa18.84■□□□□ 0.61
ATRX-217ENST00000624668 CYP2D6P10635 497 aa18.84■□□□□ 0.61
ATRX-217ENST00000624668 RAB3GAP1Q15042 981 aa18.84■□□□□ 0.61
ATRX-217ENST00000624668 ABCB5Q2M3G0 1257 aa18.84■□□□□ 0.61
ATRX-217ENST00000624668 CERKLQ49MI3 558 aaPredicted RBP18.84■□□□□ 0.61
ATRX-217ENST00000624668 GPRC5AQ8NFJ5 357 aa18.84■□□□□ 0.61
ATRX-217ENST00000624668 SDR42E1Q8WUS8 393 aa18.84■□□□□ 0.61
ATRX-217ENST00000624668 TRIB2Q92519 343 aa18.84■□□□□ 0.61
ATRX-217ENST00000624668 CRNKL1Q9BZJ0 848 aaKnown RBP18.84■□□□□ 0.61
ATRX-217ENST00000624668 TRIOBPQ9H2D6 2365 aa18.83■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms