RNA–Protein interactions for RNA: ENST00000624403.1

ATRX-216, Transcript of ATRX, chromatin remodeler, humanhuman

TSL 3

Gene ATRX, Length 583 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRX-216ENST00000624403 TMEM67Q5HYA8 995 aa12.13□□□□□ -0.47
ATRX-216ENST00000624403 CERS3Q8IU89 383 aa12.13□□□□□ -0.47
ATRX-216ENST00000624403 SMARCC2Q8TAQ2 1214 aa12.13□□□□□ -0.47
ATRX-216ENST00000624403 RNF166Q96A37 237 aaPredicted RBP12.13□□□□□ -0.47
ATRX-216ENST00000624403 LY9Q9HBG7 655 aa12.13□□□□□ -0.47
ATRX-216ENST00000624403 SENP2Q9HC62 589 aa12.13□□□□□ -0.47
ATRX-216ENST00000624403 NCOA5Q9HCD5 579 aaKnown RBP12.13□□□□□ -0.47
ATRX-216ENST00000624403 KCNQ5Q9NR82 932 aa12.13□□□□□ -0.47
ATRX-216ENST00000624403 MKRN1Q9UHC7 482 aaKnown RBP12.13□□□□□ -0.47
ATRX-216ENST00000624403 HPS5Q9UPZ3 1129 aa12.13□□□□□ -0.47
ATRX-216ENST00000624403 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.13□□□□□ -0.47
ATRX-216ENST00000624403 DAGLAQ9Y4D2 1042 aa12.13□□□□□ -0.47
ATRX-216ENST00000624403 KIF13BQ9NQT8 1826 aa12.13□□□□□ -0.47
ATRX-216ENST00000624403 CHD4Q14839 1912 aa12.13□□□□□ -0.47
ATRX-216ENST00000624403 IFIT3O14879 490 aaKnown RBP12.12□□□□□ -0.47
ATRX-216ENST00000624403 FGRP09769 529 aa12.12□□□□□ -0.47
ATRX-216ENST00000624403 ZSCAN22P10073 491 aaPredicted RBP12.12□□□□□ -0.47
ATRX-216ENST00000624403 PCP11498 1178 aaKnown RBP12.12□□□□□ -0.47
ATRX-216ENST00000624403 RHBDL3P58872 404 aa12.12□□□□□ -0.47
ATRX-216ENST00000624403 TGFB2P61812 414 aa12.12□□□□□ -0.47
ATRX-216ENST00000624403 FKBP1AP62942 108 aaKnown RBP12.12□□□□□ -0.47
ATRX-216ENST00000624403 ADGRD1Q6QNK2 874 aa12.12□□□□□ -0.47
ATRX-216ENST00000624403 RAB11FIP4Q86YS3 637 aa12.12□□□□□ -0.47
ATRX-216ENST00000624403 TEX11Q8IYF3 940 aa12.12□□□□□ -0.47
ATRX-216ENST00000624403 RTKN2Q8IZC4 609 aa12.12□□□□□ -0.47
ATRX-216ENST00000624403 NSUN7Q8NE18 718 aaKnown RBP12.12□□□□□ -0.47
ATRX-216ENST00000624403 TGFBRAP1Q8WUH2 860 aa12.12□□□□□ -0.47
ATRX-216ENST00000624403 ESR2Q92731 530 aa12.12□□□□□ -0.47
ATRX-216ENST00000624403 CHMP4CQ96CF2 233 aa12.12□□□□□ -0.47
ATRX-216ENST00000624403 MCM9Q9NXL9 1143 aa12.12□□□□□ -0.47
ATRX-216ENST00000624403 TTF2Q9UNY4 1162 aaKnown RBP12.12□□□□□ -0.47
ATRX-216ENST00000624403 MTMR6Q9Y217 621 aa12.12□□□□□ -0.47
ATRX-216ENST00000624403 PTPDC1A2A3K4 754 aa12.11□□□□□ -0.47
ATRX-216ENST00000624403 PPIP5K2O43314 1243 aa12.11□□□□□ -0.47
ATRX-216ENST00000624403 ORC4O43929 436 aa12.11□□□□□ -0.47
ATRX-216ENST00000624403 PRDM1O75626 825 aa12.11□□□□□ -0.47
ATRX-216ENST00000624403 SLC3A2P08195 630 aaKnown RBP12.11□□□□□ -0.47
ATRX-216ENST00000624403 LIFRP42702 1097 aa12.11□□□□□ -0.47
ATRX-216ENST00000624403 DACT2Q5SW24 774 aa12.11□□□□□ -0.47
ATRX-216ENST00000624403 C12orf60Q5U649 245 aa12.11□□□□□ -0.47
ATRX-216ENST00000624403 STRIP1Q5VSL9 837 aa12.11□□□□□ -0.47
ATRX-216ENST00000624403 LARP1BQ659C4 914 aaKnown RBP12.11□□□□□ -0.47
ATRX-216ENST00000624403 NFXL1Q6ZNB6 911 aa12.11□□□□□ -0.47
ATRX-216ENST00000624403 SGMS1Q86VZ5 419 aa12.11□□□□□ -0.47
ATRX-216ENST00000624403 MAPKAPK5Q8IW41 473 aa12.11□□□□□ -0.47
ATRX-216ENST00000624403 DDX11Q96FC9 970 aa12.11□□□□□ -0.47
ATRX-216ENST00000624403 CHAMP1Q96JM3 812 aa12.11□□□□□ -0.47
ATRX-216ENST00000624403 PSMD1Q99460 953 aa12.11□□□□□ -0.47
ATRX-216ENST00000624403 ZKSCAN3Q9BRR0 538 aa12.11□□□□□ -0.47
ATRX-216ENST00000624403 MTA3Q9BTC8 594 aa12.11□□□□□ -0.47
ATRX-216ENST00000624403 SAP30BPQ9UHR5 308 aaKnown RBP12.11□□□□□ -0.47
ATRX-216ENST00000624403 MYH2Q9UKX2 1941 aa12.11□□□□□ -0.47
ATRX-216ENST00000624403 BAZ2AQ9UIF9 1905 aaKnown RBP12.1□□□□□ -0.47
ATRX-216ENST00000624403 VPS37CA5D8V6 355 aaPredicted RBP12.1□□□□□ -0.47
ATRX-216ENST00000624403 USP17L3A6NCW0 530 aa12.1□□□□□ -0.47
ATRX-216ENST00000624403 USP17L4A6NCW7 530 aa12.1□□□□□ -0.47
ATRX-216ENST00000624403 F13A1P00488 732 aa12.1□□□□□ -0.47
ATRX-216ENST00000624403 PDCP20941 246 aa12.1□□□□□ -0.47
ATRX-216ENST00000624403 PTGER2P43116 358 aa12.1□□□□□ -0.47
ATRX-216ENST00000624403 SCNN1DP51172 638 aa12.1□□□□□ -0.47
ATRX-216ENST00000624403 WTAPQ15007 396 aa12.1□□□□□ -0.47
ATRX-216ENST00000624403 SART3Q15020 963 aaKnown RBP12.1□□□□□ -0.47
ATRX-216ENST00000624403 SLC4A8Q2Y0W8 1093 aa12.1□□□□□ -0.47
ATRX-216ENST00000624403 MCTP1Q6DN14 999 aa12.1□□□□□ -0.47
ATRX-216ENST00000624403 APOA5Q6Q788 366 aa12.1□□□□□ -0.47
ATRX-216ENST00000624403 USP17L1Q7RTZ2 530 aa12.1□□□□□ -0.47
ATRX-216ENST00000624403 PIM2Q9P1W9 311 aa12.1□□□□□ -0.47
ATRX-216ENST00000624403 LAMB1P07942 1786 aa12.1□□□□□ -0.47
ATRX-216ENST00000624403 ROBO3Q96MS0 1386 aa12.09□□□□□ -0.47
ATRX-216ENST00000624403 ERICH2A1L162 156 aa12.09□□□□□ -0.47
ATRX-216ENST00000624403 CCDC69A6NI79 296 aa12.09□□□□□ -0.47
ATRX-216ENST00000624403 YDJCA8MPS7 323 aa12.09□□□□□ -0.47
ATRX-216ENST00000624403 GOLGA6L22H0YM25 854 aa12.09□□□□□ -0.47
ATRX-216ENST00000624403 ZBTB43O43298 467 aa12.09□□□□□ -0.47
ATRX-216ENST00000624403 DHX16O60231 1041 aaKnown RBP12.09□□□□□ -0.47
ATRX-216ENST00000624403 RANBP6O60518 1105 aaKnown RBP12.09□□□□□ -0.47
ATRX-216ENST00000624403 PDIA4P13667 645 aaKnown RBP12.09□□□□□ -0.47
ATRX-216ENST00000624403 PTMSP20962 102 aa12.09□□□□□ -0.47
ATRX-216ENST00000624403 CRKP46108 304 aa12.09□□□□□ -0.47
ATRX-216ENST00000624403 HMGN5P82970 282 aaKnown RBP12.09□□□□□ -0.47
ATRX-216ENST00000624403 SEC23AQ15436 765 aa12.09□□□□□ -0.47
ATRX-216ENST00000624403 HHIPL2Q6UWX4 724 aa12.09□□□□□ -0.47
ATRX-216ENST00000624403 FAM184AQ8NB25 1140 aa12.09□□□□□ -0.47
ATRX-216ENST00000624403 TEKT1Q969V4 418 aa12.09□□□□□ -0.47
ATRX-216ENST00000624403 UBAC1Q9BSL1 405 aa12.09□□□□□ -0.47
ATRX-216ENST00000624403 SLC12A7Q9Y666 1083 aa12.09□□□□□ -0.47
ATRX-216ENST00000624403 TNKSO95271 1327 aa12.09□□□□□ -0.47
ATRX-216ENST00000624403 FLT1P17948 1338 aa12.09□□□□□ -0.47
ATRX-216ENST00000624403 GOLGA8AA7E2F4 631 aa12.08□□□□□ -0.48
ATRX-216ENST00000624403 TRAK2O60296 914 aa12.08□□□□□ -0.48
ATRX-216ENST00000624403 POLR3DP05423 398 aaPredicted RBP12.08□□□□□ -0.48
ATRX-216ENST00000624403 RXRAP19793 462 aa12.08□□□□□ -0.48
ATRX-216ENST00000624403 METAP2P50579 478 aaKnown RBP eCLIP12.08□□□□□ -0.48
ATRX-216ENST00000624403 PDE4BQ07343 736 aa12.08□□□□□ -0.48
ATRX-216ENST00000624403 DALRD3Q5D0E6 543 aaKnown RBP12.08□□□□□ -0.48
ATRX-216ENST00000624403 SOGA3Q5TF21 947 aa12.08□□□□□ -0.48
ATRX-216ENST00000624403 CDC37L1Q7L3B6 337 aa12.08□□□□□ -0.48
ATRX-216ENST00000624403 MICU3Q86XE3 530 aa12.08□□□□□ -0.48
ATRX-216ENST00000624403 KIAA0825Q8IV33 1275 aa12.08□□□□□ -0.48
ATRX-216ENST00000624403 AMOTL1Q8IY63 956 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms