RNA–Protein interactions for RNA: ENST00000622817.4

CBWD3-219, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,877 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-219ENST00000622817 NFXL1Q6ZNB6 911 aa8.21□□□□□ -1.1
CBWD3-219ENST00000622817 TTC6Q86TZ1 520 aa8.21□□□□□ -1.1
CBWD3-219ENST00000622817 IQCA1Q86XH1 822 aa8.21□□□□□ -1.1
CBWD3-219ENST00000622817 OGFOD1Q8N543 542 aa8.21□□□□□ -1.1
CBWD3-219ENST00000622817 NKX2-3Q8TAU0 364 aa8.21□□□□□ -1.1
CBWD3-219ENST00000622817 GMLQ99445 158 aa8.21□□□□□ -1.1
CBWD3-219ENST00000622817 LY9Q9HBG7 655 aa8.21□□□□□ -1.1
CBWD3-219ENST00000622817 BRPF3Q9ULD4 1205 aa8.21□□□□□ -1.1
CBWD3-219ENST00000622817 LAMB1P07942 1786 aa8.21□□□□□ -1.1
CBWD3-219ENST00000622817 ZNF646O15015 1829 aaPredicted RBP8.2□□□□□ -1.1
CBWD3-219ENST00000622817 COL4A5P29400 1685 aa8.2□□□□□ -1.1
CBWD3-219ENST00000622817 NAV1Q8NEY1 1877 aa8.2□□□□□ -1.1
CBWD3-219ENST00000622817 CCDC69A6NI79 296 aa8.2□□□□□ -1.1
CBWD3-219ENST00000622817 SMIM22K7EJ46 135 aa8.2□□□□□ -1.1
CBWD3-219ENST00000622817 PRDM1O75626 825 aa8.2□□□□□ -1.1
CBWD3-219ENST00000622817 PDCP20941 246 aa8.2□□□□□ -1.1
CBWD3-219ENST00000622817 GJB2P29033 226 aa8.2□□□□□ -1.1
CBWD3-219ENST00000622817 MMP14P50281 582 aa8.2□□□□□ -1.1
CBWD3-219ENST00000622817 CXCL9Q07325 125 aa8.2□□□□□ -1.1
CBWD3-219ENST00000622817 SCRN1Q12765 414 aa8.2□□□□□ -1.1
CBWD3-219ENST00000622817 CFAP100Q494V2 611 aa8.2□□□□□ -1.1
CBWD3-219ENST00000622817 CCDC178Q5BJE1 867 aa8.2□□□□□ -1.1
CBWD3-219ENST00000622817 CIAPIN1Q6FI81 312 aa8.2□□□□□ -1.1
CBWD3-219ENST00000622817 SYNE3Q6ZMZ3 975 aa8.2□□□□□ -1.1
CBWD3-219ENST00000622817 HS6ST3Q8IZP7 471 aa8.2□□□□□ -1.1
CBWD3-219ENST00000622817 ZSCAN10Q96SZ4 725 aaPredicted RBP8.2□□□□□ -1.1
CBWD3-219ENST00000622817 FHDC1Q9C0D6 1143 aaPredicted RBP8.2□□□□□ -1.1
CBWD3-219ENST00000622817 MKNK2Q9HBH9 465 aa8.2□□□□□ -1.1
CBWD3-219ENST00000622817 ARFGEF1Q9Y6D6 1849 aa8.19□□□□□ -1.1
CBWD3-219ENST00000622817 PLCD1P51178 756 aa8.19□□□□□ -1.1
CBWD3-219ENST00000622817 RCAN1P53805 252 aa8.19□□□□□ -1.1
CBWD3-219ENST00000622817 CCT2P78371 535 aaKnown RBP8.19□□□□□ -1.1
CBWD3-219ENST00000622817 HMGN5P82970 282 aaKnown RBP8.19□□□□□ -1.1
CBWD3-219ENST00000622817 PICALMQ13492 652 aa8.19□□□□□ -1.1
CBWD3-219ENST00000622817 APOA5Q6Q788 366 aa8.19□□□□□ -1.1
CBWD3-219ENST00000622817 C16orf86Q6ZW13 317 aa8.19□□□□□ -1.1
CBWD3-219ENST00000622817 TNPO1Q92973 898 aaKnown RBP8.19□□□□□ -1.1
CBWD3-219ENST00000622817 DYNLL2Q96FJ2 89 aa8.19□□□□□ -1.1
CBWD3-219ENST00000622817 IDI2Q9BXS1 227 aa8.19□□□□□ -1.1
CBWD3-219ENST00000622817 OSBPL5Q9H0X9 879 aaPredicted RBP8.19□□□□□ -1.1
CBWD3-219ENST00000622817 DDX4Q9NQI0 724 aaKnown RBP8.19□□□□□ -1.1
CBWD3-219ENST00000622817 HPS5Q9UPZ3 1129 aa8.19□□□□□ -1.1
CBWD3-219ENST00000622817 KIF3AQ9Y496 699 aa8.19□□□□□ -1.1
CBWD3-219ENST00000622817 SLC12A7Q9Y666 1083 aa8.19□□□□□ -1.1
CBWD3-219ENST00000622817 CDK5RAP2Q96SN8 1893 aa8.19□□□□□ -1.1
CBWD3-219ENST00000622817 WDR33Q9C0J8 1336 aaKnown RBP8.19□□□□□ -1.1
CBWD3-219ENST00000622817 TSPY2A6NKD2 308 aa8.19□□□□□ -1.1
CBWD3-219ENST00000622817 CPLX1O14810 134 aa8.19□□□□□ -1.1
CBWD3-219ENST00000622817 ZBTB43O43298 467 aa8.19□□□□□ -1.1
CBWD3-219ENST00000622817 BRD1O95696 1058 aa8.19□□□□□ -1.1
CBWD3-219ENST00000622817 HLA-DOAP06340 250 aa8.19□□□□□ -1.1
CBWD3-219ENST00000622817 RPS12P25398 132 aaKnown RBP8.19□□□□□ -1.1
CBWD3-219ENST00000622817 CDK8P49336 464 aa8.19□□□□□ -1.1
CBWD3-219ENST00000622817 EIF6P56537 245 aaKnown RBP8.19□□□□□ -1.1
CBWD3-219ENST00000622817 RASSF7Q02833 373 aa8.19□□□□□ -1.1
CBWD3-219ENST00000622817 DLGAP5Q15398 846 aa8.19□□□□□ -1.1
CBWD3-219ENST00000622817 SEC23AQ15436 765 aa8.19□□□□□ -1.1
CBWD3-219ENST00000622817 NFKBIBQ15653 356 aa8.19□□□□□ -1.1
CBWD3-219ENST00000622817 SLC4A8Q2Y0W8 1093 aa8.19□□□□□ -1.1
CBWD3-219ENST00000622817 LCE2DQ5TA82 110 aaPredicted RBP8.19□□□□□ -1.1
CBWD3-219ENST00000622817 ZNF444Q8N0Y2 327 aaPredicted RBP8.19□□□□□ -1.1
CBWD3-219ENST00000622817 SMARCC2Q8TAQ2 1214 aa8.19□□□□□ -1.1
CBWD3-219ENST00000622817 GBP4Q96PP9 640 aa8.19□□□□□ -1.1
CBWD3-219ENST00000622817 ZKSCAN3Q9BRR0 538 aa8.19□□□□□ -1.1
CBWD3-219ENST00000622817 DHX36Q9H2U1 1008 aaKnown RBP8.19□□□□□ -1.1
CBWD3-219ENST00000622817 TNKSO95271 1327 aa8.19□□□□□ -1.1
CBWD3-219ENST00000622817 FOCADQ5VW36 1801 aa8.19□□□□□ -1.1
CBWD3-219ENST00000622817 DDX60LQ5H9U9 1706 aaKnown RBP8.18□□□□□ -1.1
CBWD3-219ENST00000622817 STX6O43752 255 aa8.18□□□□□ -1.1
CBWD3-219ENST00000622817 CDKL5O76039 1030 aa8.18□□□□□ -1.1
CBWD3-219ENST00000622817 TSPY3P0CV98 308 aa8.18□□□□□ -1.1
CBWD3-219ENST00000622817 TSPY8P0CW00 308 aa8.18□□□□□ -1.1
CBWD3-219ENST00000622817 SYT1P21579 422 aa8.18□□□□□ -1.1
CBWD3-219ENST00000622817 METAP2P50579 478 aaKnown RBP eCLIP8.18□□□□□ -1.1
CBWD3-219ENST00000622817 TFAP4Q01664 338 aa8.18□□□□□ -1.1
CBWD3-219ENST00000622817 PKP1Q13835 747 aa8.18□□□□□ -1.1
CBWD3-219ENST00000622817 FAM47AQ5JRC9 791 aa8.18□□□□□ -1.1
CBWD3-219ENST00000622817 IFIT1BQ5T764 474 aaKnown RBP8.18□□□□□ -1.1
CBWD3-219ENST00000622817 LARP1BQ659C4 914 aaKnown RBP8.18□□□□□ -1.1
CBWD3-219ENST00000622817 CPLX2Q6PUV4 134 aaKnown RBP8.18□□□□□ -1.1
CBWD3-219ENST00000622817 CLEC17AQ6ZS10 378 aa8.18□□□□□ -1.1
CBWD3-219ENST00000622817 ARHGAP27Q6ZUM4 889 aa8.18□□□□□ -1.1
CBWD3-219ENST00000622817 ENAHQ8N8S7 591 aaPredicted RBP8.18□□□□□ -1.1
CBWD3-219ENST00000622817 MTMR14Q8NCE2 650 aa8.18□□□□□ -1.1
CBWD3-219ENST00000622817 NSUN7Q8NE18 718 aaKnown RBP8.18□□□□□ -1.1
CBWD3-219ENST00000622817 PRMT6Q96LA8 375 aaPredicted RBP8.18□□□□□ -1.1
CBWD3-219ENST00000622817 SENP2Q9HC62 589 aa8.18□□□□□ -1.1
CBWD3-219ENST00000622817 NCOA5Q9HCD5 579 aaKnown RBP8.18□□□□□ -1.1
CBWD3-219ENST00000622817 TCP11L1Q9NUJ3 509 aa8.18□□□□□ -1.1
CBWD3-219ENST00000622817 TMOD2Q9NZR1 351 aa8.18□□□□□ -1.1
CBWD3-219ENST00000622817 SWAP70Q9UH65 585 aa8.18□□□□□ -1.1
CBWD3-219ENST00000622817 ZDHHC9Q9Y397 364 aa8.18□□□□□ -1.1
CBWD3-219ENST00000622817 PCDHAC2Q9Y5I4 1007 aa8.18□□□□□ -1.1
CBWD3-219ENST00000622817 MYH1P12882 1939 aa8.18□□□□□ -1.1
CBWD3-219ENST00000622817 ADAMTSL1Q8N6G6 1762 aa8.18□□□□□ -1.1
CBWD3-219ENST00000622817 CCDC196A0A1B0GTZ2 297 aa8.17□□□□□ -1.1
CBWD3-219ENST00000622817 PTPDC1A2A3K4 754 aa8.17□□□□□ -1.1
CBWD3-219ENST00000622817 GOLGA8AA7E2F4 631 aa8.17□□□□□ -1.1
CBWD3-219ENST00000622817 FZD9O00144 591 aa8.17□□□□□ -1.1
CBWD3-219ENST00000622817 JAK2O60674 1132 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms