RNA–Protein interactions for RNA: ENST00000622702.1

PDLIM2-221, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5 BASIC

Gene PDLIM2, Length 1,490 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-221ENST00000622702 DYNLL2Q96FJ2 89 aa23.52■■□□□ 1.36
PDLIM2-221ENST00000622702 WRNIP1Q96S55 665 aa23.52■■□□□ 1.36
PDLIM2-221ENST00000622702 C22orf23Q9BZE7 217 aa23.52■■□□□ 1.36
PDLIM2-221ENST00000622702 RNF41Q9H4P4 317 aaPredicted RBP23.52■■□□□ 1.36
PDLIM2-221ENST00000622702 SWAP70Q9UH65 585 aa23.52■■□□□ 1.36
PDLIM2-221ENST00000622702 TAF6LQ9Y6J9 622 aa23.52■■□□□ 1.36
PDLIM2-221ENST00000622702 ANAPC15P60006 121 aa23.51■■□□□ 1.35
PDLIM2-221ENST00000622702 MAP3K9P80192 1104 aa23.51■■□□□ 1.35
PDLIM2-221ENST00000622702 NOGQ13253 232 aa23.51■■□□□ 1.35
PDLIM2-221ENST00000622702 PPP1R3FQ6ZSY5 799 aaPredicted RBP23.51■■□□□ 1.35
PDLIM2-221ENST00000622702 CRACR2BQ8N4Y2 399 aaPredicted RBP23.51■■□□□ 1.35
PDLIM2-221ENST00000622702 DNAJC18Q9H819 358 aa23.51■■□□□ 1.35
PDLIM2-221ENST00000622702 DDX52Q9Y2R4 599 aaKnown RBP eCLIP23.51■■□□□ 1.35
PDLIM2-221ENST00000622702 MAP2K2P36507 400 aa23.5■■□□□ 1.35
PDLIM2-221ENST00000622702 RBM25P49756 843 aaKnown RBP23.5■■□□□ 1.35
PDLIM2-221ENST00000622702 PDE4BQ07343 736 aa23.5■■□□□ 1.35
PDLIM2-221ENST00000622702 IL17RAQ96F46 866 aa23.5■■□□□ 1.35
PDLIM2-221ENST00000622702 ZNF287Q9HBT7 754 aa23.5■■□□□ 1.35
PDLIM2-221ENST00000622702 SNX14Q9Y5W7 946 aa23.5■■□□□ 1.35
PDLIM2-221ENST00000622702 TACC3Q9Y6A5 838 aa23.5■■□□□ 1.35
PDLIM2-221ENST00000622702 ORC4O43929 436 aa23.49■■□□□ 1.35
PDLIM2-221ENST00000622702 SLURP2P0DP57 97 aa23.49■■□□□ 1.35
PDLIM2-221ENST00000622702 CDK8P49336 464 aa23.49■■□□□ 1.35
PDLIM2-221ENST00000622702 KRT32Q14532 448 aa23.49■■□□□ 1.35
PDLIM2-221ENST00000622702 MFSD6Q6ZSS7 791 aa23.49■■□□□ 1.35
PDLIM2-221ENST00000622702 ZIC5Q96T25 663 aa23.49■■□□□ 1.35
PDLIM2-221ENST00000622702 CSADQ9Y600 493 aa23.49■■□□□ 1.35
PDLIM2-221ENST00000622702 THSD7BQ9C0I4 1608 aa23.49■■□□□ 1.35
PDLIM2-221ENST00000622702 E7EWF7 191 aa23.49■■□□□ 1.35
PDLIM2-221ENST00000622702 NT5C2P49902 561 aa23.49■■□□□ 1.35
PDLIM2-221ENST00000622702 VGLL4Q14135 290 aa23.49■■□□□ 1.35
PDLIM2-221ENST00000622702 STOX1Q6ZVD7 989 aa23.49■■□□□ 1.35
PDLIM2-221ENST00000622702 SLC44A5Q8NCS7 719 aa23.49■■□□□ 1.35
PDLIM2-221ENST00000622702 ZKSCAN4Q969J2 545 aaPredicted RBP23.49■■□□□ 1.35
PDLIM2-221ENST00000622702 TBC1D32Q96NH3 1257 aa23.49■■□□□ 1.35
PDLIM2-221ENST00000622702 TRIM34Q9BYJ4 488 aa23.49■■□□□ 1.35
PDLIM2-221ENST00000622702 ELP3Q9H9T3 547 aa23.49■■□□□ 1.35
PDLIM2-221ENST00000622702 SHMT1P34896 483 aa23.48■■□□□ 1.35
PDLIM2-221ENST00000622702 MKRN3Q13064 507 aaKnown RBP23.48■■□□□ 1.35
PDLIM2-221ENST00000622702 TATDN1Q6P1N9 297 aa23.48■■□□□ 1.35
PDLIM2-221ENST00000622702 STK11IPQ8N1F8 1099 aa23.48■■□□□ 1.35
PDLIM2-221ENST00000622702 CNNM2Q9H8M5 875 aa23.48■■□□□ 1.35
PDLIM2-221ENST00000622702 XPO5Q9HAV4 1204 aaKnown RBP eCLIP23.48■■□□□ 1.35
PDLIM2-221ENST00000622702 ZNF112Q9UJU3 913 aa23.48■■□□□ 1.35
PDLIM2-221ENST00000622702 FAM196BA6NMK8 535 aa23.47■■□□□ 1.35
PDLIM2-221ENST00000622702 INPP5BP32019 993 aa23.47■■□□□ 1.35
PDLIM2-221ENST00000622702 KIF23Q02241 960 aaPredicted RBP23.47■■□□□ 1.35
PDLIM2-221ENST00000622702 MKNK2Q9HBH9 465 aa23.47■■□□□ 1.35
PDLIM2-221ENST00000622702 INCENPQ9NQS7 918 aa23.47■■□□□ 1.35
PDLIM2-221ENST00000622702 NEDD4P46934 1319 aa23.46■■□□□ 1.35
PDLIM2-221ENST00000622702 SPRYD7Q5W111 196 aa23.46■■□□□ 1.35
PDLIM2-221ENST00000622702 WNK4Q96J92 1243 aa23.46■■□□□ 1.35
PDLIM2-221ENST00000622702 KRT23Q9C075 422 aa23.46■■□□□ 1.35
PDLIM2-221ENST00000622702 PHF20L1A8MW92 1017 aa23.45■■□□□ 1.34
PDLIM2-221ENST00000622702 PRDM1O75626 825 aa23.45■■□□□ 1.34
PDLIM2-221ENST00000622702 RASA1P20936 1047 aa23.45■■□□□ 1.34
PDLIM2-221ENST00000622702 TRDNQ13061 729 aa23.45■■□□□ 1.34
PDLIM2-221ENST00000622702 NCOA7Q8NI08 942 aa23.45■■□□□ 1.34
PDLIM2-221ENST00000622702 SNCAIPQ9Y6H5 919 aa23.45■■□□□ 1.34
PDLIM2-221ENST00000622702 MAP2K1Q02750 393 aaPredicted RBP23.44■■□□□ 1.34
PDLIM2-221ENST00000622702 ADCK5Q3MIX3 580 aa23.44■■□□□ 1.34
PDLIM2-221ENST00000622702 OPTNQ96CV9 577 aa23.44■■□□□ 1.34
PDLIM2-221ENST00000622702 CCDC17Q96LX7 622 aa23.44■■□□□ 1.34
PDLIM2-221ENST00000622702 TM6SF1Q9BZW5 370 aa23.44■■□□□ 1.34
PDLIM2-221ENST00000622702 RALYLQ86SE5 291 aaKnown RBP23.43■■□□□ 1.34
PDLIM2-221ENST00000622702 ZNF444Q8N0Y2 327 aaPredicted RBP23.43■■□□□ 1.34
PDLIM2-221ENST00000622702 CNKSR2Q8WXI2 1034 aa23.43■■□□□ 1.34
PDLIM2-221ENST00000622702 ESR2Q92731 530 aa23.43■■□□□ 1.34
PDLIM2-221ENST00000622702 NEK1Q96PY6 1258 aa23.43■■□□□ 1.34
PDLIM2-221ENST00000622702 TOMM22Q9NS69 142 aa23.43■■□□□ 1.34
PDLIM2-221ENST00000622702 B4E1Z4 1266 aa23.43■■□□□ 1.34
PDLIM2-221ENST00000622702 ZBTB48P10074 688 aaPredicted RBP23.43■■□□□ 1.34
PDLIM2-221ENST00000622702 PSMA5P28066 241 aa23.43■■□□□ 1.34
PDLIM2-221ENST00000622702 GJA5P36382 358 aa23.43■■□□□ 1.34
PDLIM2-221ENST00000622702 CERKLQ49MI3 558 aaPredicted RBP23.43■■□□□ 1.34
PDLIM2-221ENST00000622702 RRP12Q5JTH9 1297 aaKnown RBP23.43■■□□□ 1.34
PDLIM2-221ENST00000622702 MYH8P13535 1937 aa23.42■■□□□ 1.34
PDLIM2-221ENST00000622702 RANBP6O60518 1105 aaKnown RBP23.42■■□□□ 1.34
PDLIM2-221ENST00000622702 HMGB1P09429 215 aaKnown RBP23.42■■□□□ 1.34
PDLIM2-221ENST00000622702 RRP1BQ14684 758 aaKnown RBP23.42■■□□□ 1.34
PDLIM2-221ENST00000622702 ERO1BQ86YB8 467 aa23.42■■□□□ 1.34
PDLIM2-221ENST00000622702 MB21D2Q8IYB1 491 aaPredicted RBP23.42■■□□□ 1.34
PDLIM2-221ENST00000622702 OTUD5Q96G74 571 aa23.42■■□□□ 1.34
PDLIM2-221ENST00000622702 JAKMIP1Q96N16 626 aaKnown RBP23.42■■□□□ 1.34
PDLIM2-221ENST00000622702 KIF2CQ99661 725 aa23.42■■□□□ 1.34
PDLIM2-221ENST00000622702 WBP1LQ9NX94 342 aa23.42■■□□□ 1.34
PDLIM2-221ENST00000622702 SPDYE5A6NIY4 337 aa23.41■■□□□ 1.34
PDLIM2-221ENST00000622702 KDM4AO75164 1064 aa23.41■■□□□ 1.34
PDLIM2-221ENST00000622702 HSPA1AP0DMV8 641 aaKnown RBP23.41■■□□□ 1.34
PDLIM2-221ENST00000622702 HSPA1BP0DMV9 641 aaKnown RBP23.41■■□□□ 1.34
PDLIM2-221ENST00000622702 NOL9Q5SY16 702 aaKnown RBP23.41■■□□□ 1.34
PDLIM2-221ENST00000622702 NKX2-3Q8TAU0 364 aa23.41■■□□□ 1.34
PDLIM2-221ENST00000622702 PLIN4Q96Q06 1357 aa23.41■■□□□ 1.34
PDLIM2-221ENST00000622702 CTNND1O60716 968 aaKnown RBP23.4■■□□□ 1.34
PDLIM2-221ENST00000622702 CAP2P40123 477 aa23.4■■□□□ 1.34
PDLIM2-221ENST00000622702 REM2Q8IYK8 340 aaPredicted RBP23.4■■□□□ 1.34
PDLIM2-221ENST00000622702 SCYL3Q8IZE3 742 aa23.4■■□□□ 1.34
PDLIM2-221ENST00000622702 ZSWIM6Q9HCJ5 1215 aa23.4■■□□□ 1.34
PDLIM2-221ENST00000622702 ZSWIM5Q9P217 1185 aa23.4■■□□□ 1.34
PDLIM2-221ENST00000622702 TSPY2A6NKD2 308 aa23.39■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms