RNA–Protein interactions for RNA: ENST00000622645.4

TP53-227, Transcript of tumor protein p53, humanhuman

TSL 1 (best) BASIC

Gene TP53, Length 2,653 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TP53-227ENST00000622645 PLEKHA8P1O95397 391 aa13.77□□□□□ -0.21
TP53-227ENST00000622645 PTPREP23469 700 aa13.77□□□□□ -0.21
TP53-227ENST00000622645 PRDX5P30044 214 aa13.77□□□□□ -0.21
TP53-227ENST00000622645 RCAN1P53805 252 aa13.77□□□□□ -0.21
TP53-227ENST00000622645 TXNRD3Q86VQ6 643 aa13.77□□□□□ -0.21
TP53-227ENST00000622645 ZNF710Q8N1W2 664 aa13.77□□□□□ -0.21
TP53-227ENST00000622645 ARID3AQ99856 593 aa13.77□□□□□ -0.21
TP53-227ENST00000622645 SMTNL1A8MU46 457 aa13.76□□□□□ -0.21
TP53-227ENST00000622645 HIBADHP31937 336 aaKnown RBP13.76□□□□□ -0.21
TP53-227ENST00000622645 AKAP17AQ02040 695 aaKnown RBP13.76□□□□□ -0.21
TP53-227ENST00000622645 PKN1Q16512 942 aa13.76□□□□□ -0.21
TP53-227ENST00000622645 TMC6Q7Z403 805 aa13.76□□□□□ -0.21
TP53-227ENST00000622645 RNF26Q9BY78 433 aaPredicted RBP13.76□□□□□ -0.21
TP53-227ENST00000622645 V9GY48 417 aaPredicted RBP13.76□□□□□ -0.21
TP53-227ENST00000622645 NMT2O60551 498 aa13.76□□□□□ -0.21
TP53-227ENST00000622645 ZPR1O75312 459 aa13.76□□□□□ -0.21
TP53-227ENST00000622645 TPM4P67936 248 aa13.76□□□□□ -0.21
TP53-227ENST00000622645 FUT2Q10981 343 aa13.76□□□□□ -0.21
TP53-227ENST00000622645 EARS2Q5JPH6 523 aaKnown RBP13.76□□□□□ -0.21
TP53-227ENST00000622645 SLC51AQ86UW1 340 aa13.76□□□□□ -0.21
TP53-227ENST00000622645 IQCA1Q86XH1 822 aa13.76□□□□□ -0.21
TP53-227ENST00000622645 OSBPL5Q9H0X9 879 aaPredicted RBP13.76□□□□□ -0.21
TP53-227ENST00000622645 TRMT1Q9NXH9 659 aaKnown RBP13.76□□□□□ -0.21
TP53-227ENST00000622645 LTBP4Q8N2S1 1624 aa13.75□□□□□ -0.21
TP53-227ENST00000622645 IKBKBO14920 756 aa13.75□□□□□ -0.21
TP53-227ENST00000622645 POLR2DO15514 142 aaKnown RBP13.75□□□□□ -0.21
TP53-227ENST00000622645 RPS6KA4O75676 772 aa13.75□□□□□ -0.21
TP53-227ENST00000622645 BMP6P22004 513 aa13.75□□□□□ -0.21
TP53-227ENST00000622645 TROAPQ12815 778 aa13.75□□□□□ -0.21
TP53-227ENST00000622645 USP49Q70CQ1 688 aa13.75□□□□□ -0.21
TP53-227ENST00000622645 CATIPQ7Z7H3 387 aa13.75□□□□□ -0.21
TP53-227ENST00000622645 PDILTQ8N807 584 aa13.75□□□□□ -0.21
TP53-227ENST00000622645 NYXQ9GZU5 481 aa13.75□□□□□ -0.21
TP53-227ENST00000622645 FANCCQ00597 558 aa13.75□□□□□ -0.21
TP53-227ENST00000622645 MDM2Q00987 491 aaPredicted RBP13.75□□□□□ -0.21
TP53-227ENST00000622645 SLC4A8Q2Y0W8 1093 aa13.75□□□□□ -0.21
TP53-227ENST00000622645 FAM47AQ5JRC9 791 aa13.75□□□□□ -0.21
TP53-227ENST00000622645 DCP1AQ9NPI6 582 aaPredicted RBP13.75□□□□□ -0.21
TP53-227ENST00000622645 BAZ2AQ9UIF9 1905 aaKnown RBP13.75□□□□□ -0.21
TP53-227ENST00000622645 FGRP09769 529 aa13.74□□□□□ -0.21
TP53-227ENST00000622645 CYP2D6P10635 497 aa13.74□□□□□ -0.21
TP53-227ENST00000622645 GSDMDP57764 484 aa13.74□□□□□ -0.21
TP53-227ENST00000622645 ARMCX5Q6P1M9 558 aa13.74□□□□□ -0.21
TP53-227ENST00000622645 TPTE2Q6XPS3 522 aa13.74□□□□□ -0.21
TP53-227ENST00000622645 ZNF592Q92610 1267 aa13.74□□□□□ -0.21
TP53-227ENST00000622645 MAP7D2Q96T17 732 aa13.74□□□□□ -0.21
TP53-227ENST00000622645 IMPACTQ9P2X3 320 aa13.74□□□□□ -0.21
TP53-227ENST00000622645 SEMA3EO15041 775 aa13.74□□□□□ -0.21
TP53-227ENST00000622645 MYL5Q02045 173 aa13.74□□□□□ -0.21
TP53-227ENST00000622645 PDE4BQ07343 736 aa13.74□□□□□ -0.21
TP53-227ENST00000622645 PPP2R5BQ15173 497 aa13.74□□□□□ -0.21
TP53-227ENST00000622645 GRAMD1CQ8IYS0 662 aa13.74□□□□□ -0.21
TP53-227ENST00000622645 DPF2Q92785 391 aa13.74□□□□□ -0.21
TP53-227ENST00000622645 SERTAD1Q9UHV2 236 aa13.74□□□□□ -0.21
TP53-227ENST00000622645 MYH2Q9UKX2 1941 aa13.74□□□□□ -0.21
TP53-227ENST00000622645 PRR29P0C7W0 189 aa13.73□□□□□ -0.21
TP53-227ENST00000622645 TM4SF1P30408 202 aa13.73□□□□□ -0.21
TP53-227ENST00000622645 VPS72Q15906 364 aa13.73□□□□□ -0.21
TP53-227ENST00000622645 ARHGEF1Q92888 912 aaKnown RBP13.73□□□□□ -0.21
TP53-227ENST00000622645 CSRNP2Q9H175 543 aa13.73□□□□□ -0.21
TP53-227ENST00000622645 FANCLQ9NW38 375 aa13.73□□□□□ -0.21
TP53-227ENST00000622645 CCNL1Q9UK58 526 aaPredicted RBP13.73□□□□□ -0.21
TP53-227ENST00000622645 SRPRBQ9Y5M8 271 aaKnown RBP13.73□□□□□ -0.21
TP53-227ENST00000622645 DUOX1Q9NRD9 1551 aa13.73□□□□□ -0.21
TP53-227ENST00000622645 NPHP1O15259 732 aa13.73□□□□□ -0.21
TP53-227ENST00000622645 PRPF3O43395 683 aaKnown RBP13.73□□□□□ -0.21
TP53-227ENST00000622645 XBP1P17861 261 aa13.73□□□□□ -0.21
TP53-227ENST00000622645 POSTNQ15063 836 aa13.73□□□□□ -0.21
TP53-227ENST00000622645 PTPN21Q16825 1174 aa13.73□□□□□ -0.21
TP53-227ENST00000622645 HSP90AA4PQ58FG1 418 aa13.73□□□□□ -0.21
TP53-227ENST00000622645 NOM1Q5C9Z4 860 aaKnown RBP13.73□□□□□ -0.21
TP53-227ENST00000622645 RC3H1Q5TC82 1133 aaKnown RBP13.73□□□□□ -0.21
TP53-227ENST00000622645 OLFM4Q6UX06 510 aa13.73□□□□□ -0.21
TP53-227ENST00000622645 PHF20Q9BVI0 1012 aa13.73□□□□□ -0.21
TP53-227ENST00000622645 ANKRD2Q9GZV1 360 aa13.73□□□□□ -0.21
TP53-227ENST00000622645 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.73□□□□□ -0.21
TP53-227ENST00000622645 WNT7AO00755 349 aa13.72□□□□□ -0.21
TP53-227ENST00000622645 SERPINC1P01008 464 aa13.72□□□□□ -0.21
TP53-227ENST00000622645 UBASH3AP57075 661 aa13.72□□□□□ -0.21
TP53-227ENST00000622645 CEP135Q66GS9 1140 aa13.72□□□□□ -0.21
TP53-227ENST00000622645 CCAR2Q8N163 923 aaKnown RBP13.72□□□□□ -0.21
TP53-227ENST00000622645 CRNKL1Q9BZJ0 848 aaKnown RBP13.72□□□□□ -0.21
TP53-227ENST00000622645 RTCBQ9Y3I0 505 aaKnown RBP13.72□□□□□ -0.21
TP53-227ENST00000622645 A0A1B0GUL6 1792 aa13.72□□□□□ -0.21
TP53-227ENST00000622645 TOM1O60784 492 aa13.72□□□□□ -0.21
TP53-227ENST00000622645 KRT2P35908 639 aa13.72□□□□□ -0.21
TP53-227ENST00000622645 ZNF827Q17R98 1081 aa13.72□□□□□ -0.21
TP53-227ENST00000622645 MAN1B1Q9UKM7 699 aa13.72□□□□□ -0.21
TP53-227ENST00000622645 CEP131Q9UPN4 1083 aa13.72□□□□□ -0.21
TP53-227ENST00000622645 TRIM75PA6NK02 468 aa13.71□□□□□ -0.21
TP53-227ENST00000622645 PCP11498 1178 aaKnown RBP13.71□□□□□ -0.21
TP53-227ENST00000622645 SFPQP23246 707 aaKnown RBP eCLIP13.71□□□□□ -0.21
TP53-227ENST00000622645 PTPN14Q15678 1187 aa13.71□□□□□ -0.21
TP53-227ENST00000622645 NYAP1Q6ZVC0 841 aa13.71□□□□□ -0.21
TP53-227ENST00000622645 TMTC3Q6ZXV5 915 aa13.71□□□□□ -0.21
TP53-227ENST00000622645 SRBD1Q8N5C6 995 aaKnown RBP13.71□□□□□ -0.21
TP53-227ENST00000622645 ZNF579Q8NAF0 562 aaKnown RBP13.71□□□□□ -0.21
TP53-227ENST00000622645 RBM28Q9NW13 759 aaKnown RBP13.71□□□□□ -0.21
TP53-227ENST00000622645 SCN7AQ01118 1682 aa13.71□□□□□ -0.21
TP53-227ENST00000622645 RGL2O15211 777 aa13.71□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms