RNA–Protein interactions for RNA: ENST00000622209.4

PMPCA-212, Transcript of peptidase, mitochondrial processing alpha subunit, humanhuman

TSL 1 (best)

Gene PMPCA, Length 1,013 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMPCA-212ENST00000622209 FLT1P17948 1338 aa25.5■■□□□ 1.67
PMPCA-212ENST00000622209 UBXN2AP68543 259 aa25.5■■□□□ 1.67
PMPCA-212ENST00000622209 MAST2Q6P0Q8 1798 aa25.5■■□□□ 1.67
PMPCA-212ENST00000622209 TRIM34Q9BYJ4 488 aa25.5■■□□□ 1.67
PMPCA-212ENST00000622209 RNF208Q9H0X6 261 aa25.5■■□□□ 1.67
PMPCA-212ENST00000622209 PNMA3Q9UL41 463 aa25.5■■□□□ 1.67
PMPCA-212ENST00000622209 RBBP6Q7Z6E9 1792 aaKnown RBP25.49■■□□□ 1.67
PMPCA-212ENST00000622209 ERC2O15083 957 aa25.49■■□□□ 1.67
PMPCA-212ENST00000622209 ADCY3O60266 1144 aa25.49■■□□□ 1.67
PMPCA-212ENST00000622209 JAG1P78504 1218 aa25.49■■□□□ 1.67
PMPCA-212ENST00000622209 CRACR2BQ8N4Y2 399 aaPredicted RBP25.49■■□□□ 1.67
PMPCA-212ENST00000622209 SLAIN1Q8ND83 568 aa25.49■■□□□ 1.67
PMPCA-212ENST00000622209 SHISA4Q96DD7 197 aa25.49■■□□□ 1.67
PMPCA-212ENST00000622209 TBC1D2Q9BYX2 928 aa25.49■■□□□ 1.67
PMPCA-212ENST00000622209 AS3MTQ9HBK9 375 aa25.49■■□□□ 1.67
PMPCA-212ENST00000622209 CENPBP07199 599 aaPredicted RBP25.48■■□□□ 1.67
PMPCA-212ENST00000622209 ELNP15502 786 aa25.48■■□□□ 1.67
PMPCA-212ENST00000622209 MX1P20591 662 aa25.48■■□□□ 1.67
PMPCA-212ENST00000622209 HABP4Q5JVS0 413 aaKnown RBP25.48■■□□□ 1.67
PMPCA-212ENST00000622209 FOXP4Q8IVH2 680 aaPredicted RBP25.48■■□□□ 1.67
PMPCA-212ENST00000622209 MAGEB6Q8N7X4 407 aa25.48■■□□□ 1.67
PMPCA-212ENST00000622209 DNAJC18Q9H819 358 aa25.48■■□□□ 1.67
PMPCA-212ENST00000622209 TAOK2Q9UL54 1235 aa25.48■■□□□ 1.67
PMPCA-212ENST00000622209 SALL3Q9BXA9 1300 aa25.47■■□□□ 1.67
PMPCA-212ENST00000622209 GJB1P08034 283 aa25.47■■□□□ 1.67
PMPCA-212ENST00000622209 NUCB1Q02818 461 aa25.47■■□□□ 1.67
PMPCA-212ENST00000622209 SHROOM1Q2M3G4 852 aaPredicted RBP25.47■■□□□ 1.67
PMPCA-212ENST00000622209 B4GALNT3Q6L9W6 998 aa25.47■■□□□ 1.67
PMPCA-212ENST00000622209 CERS3Q8IU89 383 aa25.47■■□□□ 1.67
PMPCA-212ENST00000622209 MIGA1Q8NAN2 632 aa25.47■■□□□ 1.67
PMPCA-212ENST00000622209 NKX2-3Q8TAU0 364 aa25.47■■□□□ 1.67
PMPCA-212ENST00000622209 OTUD7AQ8TE49 926 aaPredicted RBP25.47■■□□□ 1.67
PMPCA-212ENST00000622209 EDC3Q96F86 508 aaKnown RBP25.47■■□□□ 1.67
PMPCA-212ENST00000622209 UNC93B1Q9H1C4 597 aa25.47■■□□□ 1.67
PMPCA-212ENST00000622209 DOCK1Q14185 1865 aa25.47■■□□□ 1.67
PMPCA-212ENST00000622209 MYO5AQ9Y4I1 1855 aaKnown RBP25.47■■□□□ 1.67
PMPCA-212ENST00000622209 GLRX3O76003 335 aaKnown RBP25.46■■□□□ 1.67
PMPCA-212ENST00000622209 GDF11O95390 407 aa25.46■■□□□ 1.67
PMPCA-212ENST00000622209 GJA8P48165 433 aa25.46■■□□□ 1.67
PMPCA-212ENST00000622209 PABPC4Q13310 644 aaKnown RBP eCLIP25.46■■□□□ 1.67
PMPCA-212ENST00000622209 MTMR2Q13614 643 aa25.46■■□□□ 1.67
PMPCA-212ENST00000622209 SH3D19Q5HYK7 790 aa25.46■■□□□ 1.67
PMPCA-212ENST00000622209 SLC9C2Q5TAH2 1124 aa25.46■■□□□ 1.67
PMPCA-212ENST00000622209 CHD1LQ86WJ1 897 aa25.46■■□□□ 1.67
PMPCA-212ENST00000622209 COA7Q96BR5 231 aa25.46■■□□□ 1.67
PMPCA-212ENST00000622209 WDR18Q9BV38 432 aa25.46■■□□□ 1.67
PMPCA-212ENST00000622209 DDX24Q9GZR7 859 aaKnown RBP eCLIP25.46■■□□□ 1.671e-6■■■□□ 17.9
PMPCA-212ENST00000622209 ASCC2Q9H1I8 757 aaPredicted RBP25.46■■□□□ 1.67
PMPCA-212ENST00000622209 ASNSP08243 561 aa25.45■■□□□ 1.66
PMPCA-212ENST00000622209 PDE6AP16499 860 aa25.45■■□□□ 1.66
PMPCA-212ENST00000622209 FAM110CQ1W6H9 321 aa25.45■■□□□ 1.66
PMPCA-212ENST00000622209 TSHZ3Q63HK5 1081 aa25.45■■□□□ 1.66
PMPCA-212ENST00000622209 METTL16Q86W50 562 aaKnown RBP25.45■■□□□ 1.66
PMPCA-212ENST00000622209 LNPKQ9C0E8 428 aa25.45■■□□□ 1.66
PMPCA-212ENST00000622209 STAP2Q9UGK3 403 aa25.45■■□□□ 1.66
PMPCA-212ENST00000622209 HLA-DOAP06340 250 aa25.44■■□□□ 1.66
PMPCA-212ENST00000622209 GCLCP48506 637 aaPredicted RBP25.44■■□□□ 1.66
PMPCA-212ENST00000622209 PI4K2BQ8TCG2 481 aa25.44■■□□□ 1.66
PMPCA-212ENST00000622209 TMOD4Q9NZQ9 345 aa25.44■■□□□ 1.66
PMPCA-212ENST00000622209 H0YGN5 161 aa25.43■■□□□ 1.66
PMPCA-212ENST00000622209 INHAP05111 366 aa25.43■■□□□ 1.66
PMPCA-212ENST00000622209 USP5P45974 858 aa25.43■■□□□ 1.66
PMPCA-212ENST00000622209 BACE1P56817 501 aa25.43■■□□□ 1.66
PMPCA-212ENST00000622209 IRF5Q13568 498 aa25.43■■□□□ 1.66
PMPCA-212ENST00000622209 DPF3Q92784 378 aa25.43■■□□□ 1.66
PMPCA-212ENST00000622209 PHIPQ8WWQ0 1821 aa25.42■■□□□ 1.66
PMPCA-212ENST00000622209 PDE1AP54750 535 aa25.42■■□□□ 1.66
PMPCA-212ENST00000622209 ZSCAN25Q6NSZ9 544 aa25.42■■□□□ 1.66
PMPCA-212ENST00000622209 PXYLP1Q8TE99 480 aa25.42■■□□□ 1.66
PMPCA-212ENST00000622209 U2AF1L4Q8WU68 220 aaKnown RBP25.42■■□□□ 1.66
PMPCA-212ENST00000622209 ZNF532Q9HCE3 1301 aa25.41■■□□□ 1.66
PMPCA-212ENST00000622209 TCRBV5S4A2TA0A5A2 114 aa25.41■■□□□ 1.66
PMPCA-212ENST00000622209 IRX3P78415 501 aaPredicted RBP25.41■■□□□ 1.66
PMPCA-212ENST00000622209 KBTBD3Q8NAB2 608 aa25.41■■□□□ 1.66
PMPCA-212ENST00000622209 P2RX7Q99572 595 aaKnown RBP25.41■■□□□ 1.66
PMPCA-212ENST00000622209 ZBTB21Q9ULJ3 1066 aa25.41■■□□□ 1.66
PMPCA-212ENST00000622209 ADD2P35612 726 aa25.4■■□□□ 1.66
PMPCA-212ENST00000622209 COLQQ9Y215 455 aaPredicted RBP25.4■■□□□ 1.66
PMPCA-212ENST00000622209 C19orf81C9J6K1 198 aa25.39■■□□□ 1.66
PMPCA-212ENST00000622209 USP17L10C9JJH3 530 aa25.39■■□□□ 1.66
PMPCA-212ENST00000622209 PEX10O60683 326 aa25.39■■□□□ 1.66
PMPCA-212ENST00000622209 SGPL1O95470 568 aa25.39■■□□□ 1.66
PMPCA-212ENST00000622209 UBE3CQ15386 1083 aa25.39■■□□□ 1.66
PMPCA-212ENST00000622209 GINM1Q9NU53 330 aa25.39■■□□□ 1.66
PMPCA-212ENST00000622209 PCDH10Q9P2E7 1040 aa25.39■■□□□ 1.66
PMPCA-212ENST00000622209 MAGEB6P1A0A0J9YX57 407 aa25.38■■□□□ 1.65
PMPCA-212ENST00000622209 GH2P01242 217 aa25.38■■□□□ 1.65
PMPCA-212ENST00000622209 TFRCP02786 760 aaKnown RBP25.38■■□□□ 1.65
PMPCA-212ENST00000622209 LRRFIP1Q32MZ4 808 aaKnown RBP25.38■■□□□ 1.65
PMPCA-212ENST00000622209 UBE2Q1Q7Z7E8 422 aa25.38■■□□□ 1.65
PMPCA-212ENST00000622209 DEFB118Q96PH6 123 aa25.38■■□□□ 1.65
PMPCA-212ENST00000622209 RIOK1Q9BRS2 568 aaKnown RBP25.38■■□□□ 1.65
PMPCA-212ENST00000622209 PTPRFP10586 1907 aa25.37■■□□□ 1.65
PMPCA-212ENST00000622209 HOXA7P31268 230 aaPredicted RBP25.37■■□□□ 1.65
PMPCA-212ENST00000622209 MORF4L1Q9UBU8 362 aa25.37■■□□□ 1.65
PMPCA-212ENST00000622209 GJD2Q9UKL4 321 aa25.37■■□□□ 1.65
PMPCA-212ENST00000622209 FARP2O94887 1054 aaPredicted RBP25.36■■□□□ 1.65
PMPCA-212ENST00000622209 NEFLP07196 543 aa25.36■■□□□ 1.65
PMPCA-212ENST00000622209 OSBPL3Q9H4L5 887 aa25.36■■□□□ 1.65
PMPCA-212ENST00000622209 EMILIN3Q9NT22 766 aa25.36■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms