RNA–Protein interactions for RNA: ENST00000622183.1

CPNE3-213, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 156 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-213ENST00000622183 ZYXQ15942 572 aaKnown RBP7.28□□□□□ -1.24
CPNE3-213ENST00000622183 SLC6A19Q695T7 634 aa7.28□□□□□ -1.24
CPNE3-213ENST00000622183 ANKRD34AQ69YU3 496 aa7.28□□□□□ -1.24
CPNE3-213ENST00000622183 FAM178BQ8IXR5 827 aa7.28□□□□□ -1.24
CPNE3-213ENST00000622183 KCT2Q8NC54 265 aa7.28□□□□□ -1.24
CPNE3-213ENST00000622183 PUS7Q96PZ0 661 aaKnown RBP7.28□□□□□ -1.24
CPNE3-213ENST00000622183 PHAXQ9H814 394 aaKnown RBP7.28□□□□□ -1.24
CPNE3-213ENST00000622183 UPK3BL1B0FP48 263 aa7.27□□□□□ -1.25
CPNE3-213ENST00000622183 UPK3BL2E5RIL1 263 aa7.27□□□□□ -1.25
CPNE3-213ENST00000622183 F8W735 103 aaPredicted RBP7.27□□□□□ -1.25
CPNE3-213ENST00000622183 DDAH1O94760 285 aa7.27□□□□□ -1.25
CPNE3-213ENST00000622183 NEFMP07197 916 aa7.27□□□□□ -1.25
CPNE3-213ENST00000622183 DRD2P14416 443 aa7.27□□□□□ -1.25
CPNE3-213ENST00000622183 RAG1P15918 1043 aa7.27□□□□□ -1.25
CPNE3-213ENST00000622183 CAP2P40123 477 aa7.27□□□□□ -1.25
CPNE3-213ENST00000622183 CCNFP41002 786 aa7.27□□□□□ -1.25
CPNE3-213ENST00000622183 TTLL4Q14679 1199 aa7.27□□□□□ -1.25
CPNE3-213ENST00000622183 NCAPHQ15003 741 aa7.27□□□□□ -1.25
CPNE3-213ENST00000622183 FDX2Q6P4F2 183 aa7.27□□□□□ -1.25
CPNE3-213ENST00000622183 C6orf15Q6UXA7 325 aaPredicted RBP7.27□□□□□ -1.25
CPNE3-213ENST00000622183 C12orf50Q8NA57 414 aaPredicted RBP7.27□□□□□ -1.25
CPNE3-213ENST00000622183 C2CD4AQ8NCU7 369 aaPredicted RBP7.27□□□□□ -1.25
CPNE3-213ENST00000622183 FAM13CQ8NE31 585 aa7.27□□□□□ -1.25
CPNE3-213ENST00000622183 RNPC3Q96LT9 517 aaKnown RBP7.27□□□□□ -1.25
CPNE3-213ENST00000622183 FBRSQ9HAH7 460 aa7.27□□□□□ -1.25
CPNE3-213ENST00000622183 LTBP3Q9NS15 1303 aa7.27□□□□□ -1.25
CPNE3-213ENST00000622183 B2RBV5 119 aa7.26□□□□□ -1.25
CPNE3-213ENST00000622183 HCLS1P14317 486 aaPredicted RBP7.26□□□□□ -1.25
CPNE3-213ENST00000622183 IFRD2Q12894 506 aaPredicted RBP7.26□□□□□ -1.25
CPNE3-213ENST00000622183 NKG7Q16617 165 aa7.26□□□□□ -1.25
CPNE3-213ENST00000622183 EGFLAMQ63HQ2 1017 aa7.26□□□□□ -1.25
CPNE3-213ENST00000622183 CDC37L1Q7L3B6 337 aa7.26□□□□□ -1.25
CPNE3-213ENST00000622183 DYMQ7RTS9 669 aa7.26□□□□□ -1.25
CPNE3-213ENST00000622183 ISL2Q96A47 359 aa7.26□□□□□ -1.25
CPNE3-213ENST00000622183 DNAJC7Q99615 494 aa7.26□□□□□ -1.25
CPNE3-213ENST00000622183 PIDD1Q9HB75 910 aa7.26□□□□□ -1.25
CPNE3-213ENST00000622183 ENPP3O14638 875 aa7.25□□□□□ -1.25
CPNE3-213ENST00000622183 RGS13O14921 159 aa7.25□□□□□ -1.25
CPNE3-213ENST00000622183 WIPF1O43516 503 aa7.25□□□□□ -1.25
CPNE3-213ENST00000622183 HSD3B2P26439 372 aa7.25□□□□□ -1.25
CPNE3-213ENST00000622183 ASPAP45381 313 aa7.25□□□□□ -1.25
CPNE3-213ENST00000622183 SLBPQ14493 270 aaKnown RBP eCLIP7.25□□□□□ -1.25
CPNE3-213ENST00000622183 VHLLQ6RSH7 139 aa7.25□□□□□ -1.25
CPNE3-213ENST00000622183 SHISA2Q6UWI4 295 aa7.25□□□□□ -1.25
CPNE3-213ENST00000622183 PODNQ7Z5L7 613 aa7.25□□□□□ -1.25
CPNE3-213ENST00000622183 ST13P5Q8NFI4 369 aaPredicted RBP7.25□□□□□ -1.25
CPNE3-213ENST00000622183 ZNF669Q96BR6 464 aaPredicted RBP7.25□□□□□ -1.25
CPNE3-213ENST00000622183 ZNF214Q9UL59 606 aaPredicted RBP7.25□□□□□ -1.25
CPNE3-213ENST00000622183 ACTL7BQ9Y614 415 aa7.25□□□□□ -1.25
CPNE3-213ENST00000622183 CST3P01034 146 aaPredicted RBP7.24□□□□□ -1.25
CPNE3-213ENST00000622183 SPATA31C1P0DKV0 1188 aa7.24□□□□□ -1.25
CPNE3-213ENST00000622183 POLR2BP30876 1174 aaKnown RBP7.24□□□□□ -1.25
CPNE3-213ENST00000622183 TCEAL1Q15170 157 aa7.24□□□□□ -1.25
CPNE3-213ENST00000622183 MTERF2Q49AM1 385 aa7.24□□□□□ -1.25
CPNE3-213ENST00000622183 MRM1Q6IN84 353 aaKnown RBP7.24□□□□□ -1.25
CPNE3-213ENST00000622183 Q6ZS46 218 aa7.24□□□□□ -1.25
CPNE3-213ENST00000622183 UBE3DQ7Z6J8 389 aa7.24□□□□□ -1.25
CPNE3-213ENST00000622183 AGGF1Q8N302 714 aaeCLIP7.24□□□□□ -1.25
CPNE3-213ENST00000622183 LILRB2Q8N423 598 aa7.24□□□□□ -1.25
CPNE3-213ENST00000622183 BEND7Q8N7W2 519 aaPredicted RBP7.24□□□□□ -1.25
CPNE3-213ENST00000622183 LENG1Q96BZ8 264 aaPredicted RBP7.24□□□□□ -1.25
CPNE3-213ENST00000622183 DHRS1Q96LJ7 313 aa7.24□□□□□ -1.25
CPNE3-213ENST00000622183 AKTIPQ9H8T0 292 aa7.24□□□□□ -1.25
CPNE3-213ENST00000622183 FAM105AQ9NUU6 356 aa7.24□□□□□ -1.25
CPNE3-213ENST00000622183 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP7.23□□□□□ -1.25
CPNE3-213ENST00000622183 RNGTTO60942 597 aaKnown RBP7.23□□□□□ -1.25
CPNE3-213ENST00000622183 GRIK4Q16099 956 aa7.23□□□□□ -1.25
CPNE3-213ENST00000622183 BBS9Q3SYG4 887 aa7.23□□□□□ -1.25
CPNE3-213ENST00000622183 PRAMEF13Q5VWM6 474 aa7.23□□□□□ -1.25
CPNE3-213ENST00000622183 ZNF662Q6ZS27 426 aa7.23□□□□□ -1.25
CPNE3-213ENST00000622183 EEPD1Q7L9B9 569 aa7.23□□□□□ -1.25
CPNE3-213ENST00000622183 SMYD4Q8IYR2 804 aaPredicted RBP7.23□□□□□ -1.25
CPNE3-213ENST00000622183 PHACTR4Q8IZ21 702 aa7.23□□□□□ -1.25
CPNE3-213ENST00000622183 SH3TC2Q8TF17 1288 aa7.23□□□□□ -1.25
CPNE3-213ENST00000622183 CYB5D2Q8WUJ1 264 aa7.23□□□□□ -1.25
CPNE3-213ENST00000622183 CCDC74BQ96LY2 380 aa7.23□□□□□ -1.25
CPNE3-213ENST00000622183 KIF2CQ99661 725 aa7.23□□□□□ -1.25
CPNE3-213ENST00000622183 DPH2Q9BQC3 489 aaPredicted RBP7.23□□□□□ -1.25
CPNE3-213ENST00000622183 CEP41Q9BYV8 373 aa7.23□□□□□ -1.25
CPNE3-213ENST00000622183 PCDHB10Q9UN67 800 aa7.23□□□□□ -1.25
CPNE3-213ENST00000622183 ANKRD62A6NC57 917 aa7.22□□□□□ -1.25
CPNE3-213ENST00000622183 FAM86C2PA6NEL3 165 aa7.22□□□□□ -1.25
CPNE3-213ENST00000622183 UBOX5O94941 541 aa7.22□□□□□ -1.25
CPNE3-213ENST00000622183 NCLP19338 710 aaKnown RBP7.22□□□□□ -1.25
CPNE3-213ENST00000622183 LORP23490 312 aaPredicted RBP7.22□□□□□ -1.25
CPNE3-213ENST00000622183 PREPP48147 710 aa7.22□□□□□ -1.25
CPNE3-213ENST00000622183 PMS1P54277 932 aaKnown RBP7.22□□□□□ -1.25
CPNE3-213ENST00000622183 SLC7A5Q01650 507 aa7.22□□□□□ -1.25
CPNE3-213ENST00000622183 PHF6Q8IWS0 365 aaKnown RBP eCLIP7.22□□□□□ -1.25
CPNE3-213ENST00000622183 JMYQ8N9B5 988 aa7.22□□□□□ -1.25
CPNE3-213ENST00000622183 KLHL6Q8WZ60 621 aa7.22□□□□□ -1.25
CPNE3-213ENST00000622183 FOXQ1Q9C009 403 aa7.22□□□□□ -1.25
CPNE3-213ENST00000622183 SSU72Q9NP77 194 aaKnown RBP7.22□□□□□ -1.25
CPNE3-213ENST00000622183 ALX3O95076 343 aa7.21□□□□□ -1.26
CPNE3-213ENST00000622183 CHMP4BP1P59074 171 aa7.21□□□□□ -1.26
CPNE3-213ENST00000622183 NRG1Q02297 640 aaPredicted RBP7.21□□□□□ -1.26
CPNE3-213ENST00000622183 GNPTABQ3T906 1256 aa7.21□□□□□ -1.26
CPNE3-213ENST00000622183 KIAA1211LQ6NV74 962 aa7.21□□□□□ -1.26
CPNE3-213ENST00000622183 ARMCX6Q7L4S7 300 aa7.21□□□□□ -1.26
CPNE3-213ENST00000622183 TMEM192Q8IY95 271 aa7.21□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms