RNA–Protein interactions for RNA: ENST00000621870.4

GGA3-223, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 1 (best)

Gene GGA3, Length 4,034 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-223ENST00000621870 DCAF17Q5H9S7 520 aaPredicted RBP10.42□□□□□ -0.74
GGA3-223ENST00000621870 SASH1O94885 1247 aa10.41□□□□□ -0.74
GGA3-223ENST00000621870 TYRO3Q06418 890 aa10.41□□□□□ -0.74
GGA3-223ENST00000621870 MKRN3Q13064 507 aaKnown RBP10.41□□□□□ -0.74
GGA3-223ENST00000621870 R3HDM1Q15032 1099 aaKnown RBP10.41□□□□□ -0.74
GGA3-223ENST00000621870 SUPT20HL1Q3ZLR7 823 aa10.41□□□□□ -0.74
GGA3-223ENST00000621870 NLRX1Q86UT6 975 aa10.41□□□□□ -0.74
GGA3-223ENST00000621870 TRMT2AQ8IZ69 625 aaKnown RBP10.41□□□□□ -0.74
GGA3-223ENST00000621870 GPR108Q9NPR9 543 aa10.41□□□□□ -0.74
GGA3-223ENST00000621870 ALKQ9UM73 1620 aa10.41□□□□□ -0.74
GGA3-223ENST00000621870 USP17L3A6NCW0 530 aa10.41□□□□□ -0.74
GGA3-223ENST00000621870 USP17L4A6NCW7 530 aa10.41□□□□□ -0.74
GGA3-223ENST00000621870 ERCC3P19447 782 aa10.41□□□□□ -0.74
GGA3-223ENST00000621870 USP17L1Q7RTZ2 530 aa10.41□□□□□ -0.74
GGA3-223ENST00000621870 NCAPG2Q86XI2 1143 aa10.41□□□□□ -0.74
GGA3-223ENST00000621870 RTKN2Q8IZC4 609 aa10.41□□□□□ -0.74
GGA3-223ENST00000621870 CCDC17Q96LX7 622 aa10.41□□□□□ -0.74
GGA3-223ENST00000621870 BSDC1Q9NW68 430 aaPredicted RBP10.41□□□□□ -0.74
GGA3-223ENST00000621870 KCNH3Q9ULD8 1083 aa10.41□□□□□ -0.74
GGA3-223ENST00000621870 SORBS3O60504 671 aa10.41□□□□□ -0.74
GGA3-223ENST00000621870 CCDC172P0C7W6 258 aa10.41□□□□□ -0.74
GGA3-223ENST00000621870 ADRA2BP18089 450 aa10.41□□□□□ -0.74
GGA3-223ENST00000621870 RBM10P98175 930 aaKnown RBP10.41□□□□□ -0.74
GGA3-223ENST00000621870 PDE4DQ08499 809 aa10.41□□□□□ -0.74
GGA3-223ENST00000621870 NFIXQ14938 502 aa10.41□□□□□ -0.74
GGA3-223ENST00000621870 ME3Q16798 604 aa10.41□□□□□ -0.74
GGA3-223ENST00000621870 LRSAM1Q6UWE0 723 aa10.41□□□□□ -0.74
GGA3-223ENST00000621870 DYMQ7RTS9 669 aa10.41□□□□□ -0.74
GGA3-223ENST00000621870 TM6SF1Q9BZW5 370 aa10.41□□□□□ -0.74
GGA3-223ENST00000621870 COL15A1P39059 1388 aa10.4□□□□□ -0.74
GGA3-223ENST00000621870 ZNF521Q96K83 1311 aa10.4□□□□□ -0.74
GGA3-223ENST00000621870 CYP2D7A0A087X1C5 515 aa10.4□□□□□ -0.74
GGA3-223ENST00000621870 FBXO11Q86XK2 927 aa10.4□□□□□ -0.74
GGA3-223ENST00000621870 MARCH10Q8NA82 808 aaPredicted RBP10.4□□□□□ -0.74
GGA3-223ENST00000621870 PSTPIP2Q9H939 334 aa10.4□□□□□ -0.74
GGA3-223ENST00000621870 RRP9O43818 475 aaKnown RBP10.4□□□□□ -0.74
GGA3-223ENST00000621870 SMTNP53814 917 aa10.4□□□□□ -0.74
GGA3-223ENST00000621870 VPS72Q15906 364 aa10.4□□□□□ -0.74
GGA3-223ENST00000621870 CALCRLQ16602 461 aa10.4□□□□□ -0.74
GGA3-223ENST00000621870 GPKOWQ92917 476 aaPredicted RBP eCLIP10.4□□□□□ -0.74
GGA3-223ENST00000621870 IFT74Q96LB3 600 aa10.4□□□□□ -0.74
GGA3-223ENST00000621870 FNBP1Q96RU3 617 aa10.4□□□□□ -0.74
GGA3-223ENST00000621870 ZSWIM4Q9H7M6 989 aa10.4□□□□□ -0.74
GGA3-223ENST00000621870 SPC25Q9HBM1 224 aa10.4□□□□□ -0.74
GGA3-223ENST00000621870 PCDHA1Q9Y5I3 950 aa10.4□□□□□ -0.74
GGA3-223ENST00000621870 RNF17Q9BXT8 1623 aaKnown RBP10.4□□□□□ -0.74
GGA3-223ENST00000621870 USP17L8P0C7I0 530 aa10.4□□□□□ -0.75
GGA3-223ENST00000621870 PRDX5P30044 214 aa10.4□□□□□ -0.75
GGA3-223ENST00000621870 PABPC4Q13310 644 aaKnown RBP eCLIP10.4□□□□□ -0.755e-10■■■■■ 57.7
GGA3-223ENST00000621870 TAF12Q16514 161 aa10.4□□□□□ -0.75
GGA3-223ENST00000621870 ZMYM1Q5SVZ6 1142 aa10.4□□□□□ -0.75
GGA3-223ENST00000621870 CTAGE1Q96RT6 745 aa10.4□□□□□ -0.75
GGA3-223ENST00000621870 KIF2AO00139 706 aaPredicted RBP10.39□□□□□ -0.75
GGA3-223ENST00000621870 GAS7O60861 476 aa10.39□□□□□ -0.75
GGA3-223ENST00000621870 CYP21A2P08686 494 aa10.39□□□□□ -0.75
GGA3-223ENST00000621870 RPL13P26373 211 aaKnown RBP10.39□□□□□ -0.75
GGA3-223ENST00000621870 GNG11P61952 73 aa10.39□□□□□ -0.75
GGA3-223ENST00000621870 TBC1D10BQ4KMP7 808 aaPredicted RBP10.39□□□□□ -0.75
GGA3-223ENST00000621870 CCDC186Q7Z3E2 898 aa10.39□□□□□ -0.75
GGA3-223ENST00000621870 ZNF589Q86UQ0 364 aaPredicted RBP10.39□□□□□ -0.75
GGA3-223ENST00000621870 RASEFQ8IZ41 740 aa10.39□□□□□ -0.75
GGA3-223ENST00000621870 OSBP2Q969R2 916 aa10.39□□□□□ -0.75
GGA3-223ENST00000621870 TRIM6Q9C030 488 aaPredicted RBP10.39□□□□□ -0.75
GGA3-223ENST00000621870 COA1Q9GZY4 146 aa10.39□□□□□ -0.75
GGA3-223ENST00000621870 JADE2Q9NQC1 790 aa10.39□□□□□ -0.75
GGA3-223ENST00000621870 CLTCL1P53675 1640 aa10.39□□□□□ -0.75
GGA3-223ENST00000621870 CRB1P82279 1406 aa10.39□□□□□ -0.75
GGA3-223ENST00000621870 BICDL2A1A5D9 508 aa10.39□□□□□ -0.75
GGA3-223ENST00000621870 NBPF26B4DH59 902 aa10.39□□□□□ -0.75
GGA3-223ENST00000621870 MYCP01106 439 aaPredicted RBP10.39□□□□□ -0.75
GGA3-223ENST00000621870 FAM160A1Q05DH4 1040 aa10.39□□□□□ -0.75
GGA3-223ENST00000621870 NBPF10Q6P3W6 841 aaKnown RBP10.39□□□□□ -0.75
GGA3-223ENST00000621870 CDC37L1Q7L3B6 337 aa10.39□□□□□ -0.75
GGA3-223ENST00000621870 HOOK3Q86VS8 718 aa10.39□□□□□ -0.75
GGA3-223ENST00000621870 TPH2Q8IWU9 490 aa10.39□□□□□ -0.75
GGA3-223ENST00000621870 LCORLQ8N3X6 602 aa10.39□□□□□ -0.75
GGA3-223ENST00000621870 NBPF15Q8N660 670 aa10.39□□□□□ -0.75
GGA3-223ENST00000621870 ALS2CR12Q96Q35 445 aa10.39□□□□□ -0.75
GGA3-223ENST00000621870 MLXIPQ9HAP2 919 aa10.39□□□□□ -0.75
GGA3-223ENST00000621870 TBC1D7Q9P0N9 293 aa10.39□□□□□ -0.75
GGA3-223ENST00000621870 MINPP1Q9UNW1 487 aa10.39□□□□□ -0.75
GGA3-223ENST00000621870 DNM3Q9UQ16 869 aa10.39□□□□□ -0.75
GGA3-223ENST00000621870 SPATA31A6Q5VVP1 1343 aa10.39□□□□□ -0.75
GGA3-223ENST00000621870 DKC1O60832 514 aaKnown RBP eCLIP10.39□□□□□ -0.75
GGA3-223ENST00000621870 GJC1P36383 396 aa10.39□□□□□ -0.75
GGA3-223ENST00000621870 HLTFQ14527 1009 aaKnown RBP eCLIP10.39□□□□□ -0.753e-6■■□□□ 13
GGA3-223ENST00000621870 SLC27A3Q5K4L6 730 aa10.39□□□□□ -0.75
GGA3-223ENST00000621870 PUS7LQ9H0K6 701 aaKnown RBP10.39□□□□□ -0.75
GGA3-223ENST00000621870 ELP1O95163 1332 aa10.39□□□□□ -0.75
GGA3-223ENST00000621870 CPSF1Q10570 1443 aaKnown RBP10.38□□□□□ -0.75
GGA3-223ENST00000621870 BTBD18B2RXH4 712 aa10.38□□□□□ -0.75
GGA3-223ENST00000621870 INF2Q27J81 1249 aa10.38□□□□□ -0.75
GGA3-223ENST00000621870 GNPTABQ3T906 1256 aa10.38□□□□□ -0.75
GGA3-223ENST00000621870 PRR16Q569H4 304 aa10.38□□□□□ -0.75
GGA3-223ENST00000621870 ATL3Q6DD88 541 aa10.38□□□□□ -0.75
GGA3-223ENST00000621870 ZNF354CQ86Y25 554 aa10.38□□□□□ -0.75
GGA3-223ENST00000621870 DYNLL2Q96FJ2 89 aa10.38□□□□□ -0.75
GGA3-223ENST00000621870 STAP2Q9UGK3 403 aa10.38□□□□□ -0.75
GGA3-223ENST00000621870 CCPG1Q9ULG6 757 aa10.38□□□□□ -0.75
GGA3-223ENST00000621870 ABT1Q9ULW3 272 aaKnown RBP10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms