RNA–Protein interactions for RNA: ENST00000621245.4

CPNE3-210, Transcript of copine 3, humanhuman

TSL 5

Gene CPNE3, Length 581 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-210ENST00000621245 ELNP15502 786 aa14.02□□□□□ -0.17
CPNE3-210ENST00000621245 CAP2P40123 477 aa14.02□□□□□ -0.17
CPNE3-210ENST00000621245 HMGCS2P54868 508 aa14.02□□□□□ -0.17
CPNE3-210ENST00000621245 ARHGEF6Q15052 776 aa14.02□□□□□ -0.17
CPNE3-210ENST00000621245 CCDC158Q5M9N0 1113 aa14.02□□□□□ -0.17
CPNE3-210ENST00000621245 FASTKD5Q7L8L6 764 aaKnown RBP14.02□□□□□ -0.17
CPNE3-210ENST00000621245 NBPF11Q86T75 865 aa14.02□□□□□ -0.17
CPNE3-210ENST00000621245 MIGA1Q8NAN2 632 aa14.02□□□□□ -0.17
CPNE3-210ENST00000621245 ZNF512BQ96KM6 892 aaPredicted RBP14.02□□□□□ -0.17
CPNE3-210ENST00000621245 PALD1Q9ULE6 856 aa14.02□□□□□ -0.17
CPNE3-210ENST00000621245 AGTPBP1Q9UPW5 1226 aa14.02□□□□□ -0.17
CPNE3-210ENST00000621245 GDF11O95390 407 aa14.01□□□□□ -0.17
CPNE3-210ENST00000621245 GNRH1P01148 92 aa14.01□□□□□ -0.17
CPNE3-210ENST00000621245 GRK4P32298 578 aa14.01□□□□□ -0.17
CPNE3-210ENST00000621245 PPP4CP60510 307 aa14.01□□□□□ -0.17
CPNE3-210ENST00000621245 EVX2Q03828 476 aa14.01□□□□□ -0.17
CPNE3-210ENST00000621245 ZNF467Q7Z7K2 595 aaPredicted RBP14.01□□□□□ -0.17
CPNE3-210ENST00000621245 SIRT2Q8IXJ6 389 aa14.01□□□□□ -0.17
CPNE3-210ENST00000621245 ZNF280CQ8ND82 737 aa14.01□□□□□ -0.17
CPNE3-210ENST00000621245 RAET1EQ8TD07 263 aa14.01□□□□□ -0.17
CPNE3-210ENST00000621245 IL1RAPL2Q9NP60 686 aa14.01□□□□□ -0.17
CPNE3-210ENST00000621245 SLC45A1Q9Y2W3 748 aa14.01□□□□□ -0.17
CPNE3-210ENST00000621245 LAMA2P24043 3122 aaKnown RBP14.01□□□□□ -0.17
CPNE3-210ENST00000621245 FRMPD3Q5JV73 1810 aa14□□□□□ -0.17
CPNE3-210ENST00000621245 MAP4K4O95819 1239 aaPredicted RBP14□□□□□ -0.17
CPNE3-210ENST00000621245 CCL5P13501 91 aa14□□□□□ -0.17
CPNE3-210ENST00000621245 CYP7A1P22680 504 aa14□□□□□ -0.17
CPNE3-210ENST00000621245 PRMT2P55345 433 aa14□□□□□ -0.17
CPNE3-210ENST00000621245 FCGRTP55899 365 aa14□□□□□ -0.17
CPNE3-210ENST00000621245 ANKRD13CQ8N6S4 541 aa14□□□□□ -0.17
CPNE3-210ENST00000621245 UNC93B1Q9H1C4 597 aa14□□□□□ -0.17
CPNE3-210ENST00000621245 IDH1O75874 414 aaKnown RBP13.99□□□□□ -0.17
CPNE3-210ENST00000621245 FLT3LGP49771 235 aa13.99□□□□□ -0.17
CPNE3-210ENST00000621245 MTMR2Q13614 643 aa13.99□□□□□ -0.17
CPNE3-210ENST00000621245 AACSQ86V21 672 aa13.99□□□□□ -0.17
CPNE3-210ENST00000621245 METTL16Q86W50 562 aaKnown RBP13.99□□□□□ -0.17
CPNE3-210ENST00000621245 MAGEB6Q8N7X4 407 aa13.99□□□□□ -0.17
CPNE3-210ENST00000621245 SMCR8Q8TEV9 937 aaPredicted RBP13.99□□□□□ -0.17
CPNE3-210ENST00000621245 HERC5Q9UII4 1024 aaKnown RBP13.99□□□□□ -0.17
CPNE3-210ENST00000621245 RLFQ13129 1914 aa13.98□□□□□ -0.17
CPNE3-210ENST00000621245 USP17L5A8MUK1 530 aa13.98□□□□□ -0.17
CPNE3-210ENST00000621245 APBB1O00213 710 aa13.98□□□□□ -0.17
CPNE3-210ENST00000621245 BAG3O95817 575 aa13.98□□□□□ -0.17
CPNE3-210ENST00000621245 SLFNL1Q499Z3 407 aa13.98□□□□□ -0.17
CPNE3-210ENST00000621245 POTEEQ6S8J3 1075 aa13.98□□□□□ -0.17
CPNE3-210ENST00000621245 PROCA1Q8NCQ7 364 aaPredicted RBP13.98□□□□□ -0.17
CPNE3-210ENST00000621245 EDC3Q96F86 508 aaKnown RBP13.98□□□□□ -0.17
CPNE3-210ENST00000621245 NOL10Q9BSC4 688 aaKnown RBP13.98□□□□□ -0.17
CPNE3-210ENST00000621245 ASCC2Q9H1I8 757 aaPredicted RBP13.98□□□□□ -0.17
CPNE3-210ENST00000621245 PI4KBQ9UBF8 816 aa13.98□□□□□ -0.17
CPNE3-210ENST00000621245 ZBTB21Q9ULJ3 1066 aa13.98□□□□□ -0.17
CPNE3-210ENST00000621245 PARP14Q460N5 1801 aa13.98□□□□□ -0.17
CPNE3-210ENST00000621245 TNPO2O14787 897 aaKnown RBP13.97□□□□□ -0.17
CPNE3-210ENST00000621245 ADCY3O60266 1144 aa13.97□□□□□ -0.17
CPNE3-210ENST00000621245 INHAP05111 366 aa13.97□□□□□ -0.17
CPNE3-210ENST00000621245 SH3D19Q5HYK7 790 aa13.97□□□□□ -0.17
CPNE3-210ENST00000621245 UBE2Q1Q7Z7E8 422 aa13.97□□□□□ -0.17
CPNE3-210ENST00000621245 BCL11AQ9H165 835 aa13.97□□□□□ -0.17
CPNE3-210ENST00000621245 COG6Q9Y2V7 657 aa13.97□□□□□ -0.17
CPNE3-210ENST00000621245 FARP1Q9Y4F1 1045 aaPredicted RBP13.97□□□□□ -0.17
CPNE3-210ENST00000621245 CHGBP05060 677 aa13.96□□□□□ -0.17
CPNE3-210ENST00000621245 HOXD10P28358 340 aa13.96□□□□□ -0.17
CPNE3-210ENST00000621245 TRIM32Q13049 653 aa13.96□□□□□ -0.17
CPNE3-210ENST00000621245 FAM110CQ1W6H9 321 aa13.96□□□□□ -0.17
CPNE3-210ENST00000621245 C20orf194Q5TEA3 1177 aa13.96□□□□□ -0.17
CPNE3-210ENST00000621245 SLAIN1Q8ND83 568 aa13.96□□□□□ -0.17
CPNE3-210ENST00000621245 RHPN1Q8TCX5 695 aa13.96□□□□□ -0.17
CPNE3-210ENST00000621245 WDR18Q9BV38 432 aa13.96□□□□□ -0.17
CPNE3-210ENST00000621245 RNF208Q9H0X6 261 aa13.96□□□□□ -0.17
CPNE3-210ENST00000621245 DHX36Q9H2U1 1008 aaKnown RBP13.96□□□□□ -0.17
CPNE3-210ENST00000621245 TXNRD2Q9NNW7 524 aa13.96□□□□□ -0.17
CPNE3-210ENST00000621245 BIN2Q9UBW5 565 aaPredicted RBP13.96□□□□□ -0.17
CPNE3-210ENST00000621245 COL6A3P12111 3177 aa13.95□□□□□ -0.18
CPNE3-210ENST00000621245 H0YGN5 161 aa13.95□□□□□ -0.18
CPNE3-210ENST00000621245 GJB1P08034 283 aa13.95□□□□□ -0.18
CPNE3-210ENST00000621245 PLCG2P16885 1265 aa13.95□□□□□ -0.18
CPNE3-210ENST00000621245 GJA8P48165 433 aa13.95□□□□□ -0.18
CPNE3-210ENST00000621245 BACE1P56817 501 aa13.95□□□□□ -0.18
CPNE3-210ENST00000621245 PDAP1Q13442 181 aaKnown RBP13.95□□□□□ -0.18
CPNE3-210ENST00000621245 HABP4Q5JVS0 413 aaKnown RBP13.95□□□□□ -0.18
CPNE3-210ENST00000621245 CRACR2BQ8N4Y2 399 aaPredicted RBP13.95□□□□□ -0.18
CPNE3-210ENST00000621245 RIOK1Q9BRS2 568 aaKnown RBP13.95□□□□□ -0.18
CPNE3-210ENST00000621245 ZBTB40Q9NUA8 1239 aa13.95□□□□□ -0.18
CPNE3-210ENST00000621245 PCDHB8Q9UN66 801 aa13.95□□□□□ -0.18
CPNE3-210ENST00000621245 PCDHB13Q9Y5F0 798 aa13.95□□□□□ -0.18
CPNE3-210ENST00000621245 A0A0G2JMZ2 1700 aa13.95□□□□□ -0.18
CPNE3-210ENST00000621245 SMIM22K7EJ46 135 aa13.94□□□□□ -0.18
CPNE3-210ENST00000621245 GH2P01242 217 aa13.94□□□□□ -0.18
CPNE3-210ENST00000621245 ASNSP08243 561 aa13.94□□□□□ -0.18
CPNE3-210ENST00000621245 PLCD1P51178 756 aa13.94□□□□□ -0.18
CPNE3-210ENST00000621245 IRF5Q13568 498 aa13.94□□□□□ -0.18
CPNE3-210ENST00000621245 U2AF1L4Q8WU68 220 aaKnown RBP13.94□□□□□ -0.18
CPNE3-210ENST00000621245 P2RX7Q99572 595 aaKnown RBP13.94□□□□□ -0.18
CPNE3-210ENST00000621245 EMILIN3Q9NT22 766 aa13.94□□□□□ -0.18
CPNE3-210ENST00000621245 PNMA3Q9UL41 463 aa13.94□□□□□ -0.18
CPNE3-210ENST00000621245 COLQQ9Y215 455 aaPredicted RBP13.94□□□□□ -0.18
CPNE3-210ENST00000621245 COL11A1P12107 1806 aaPredicted RBP13.94□□□□□ -0.18
CPNE3-210ENST00000621245 TCRBV5S4A2TA0A5A2 114 aa13.93□□□□□ -0.18
CPNE3-210ENST00000621245 CYP2D6P10635 497 aa13.93□□□□□ -0.18
CPNE3-210ENST00000621245 PDE6AP16499 860 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms