RNA–Protein interactions for RNA: ENST00000621131.4

VPS29-212, Transcript of VPS29, retromer complex component, humanhuman

TSL 3 BASIC

Gene VPS29, Length 1,124 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-212ENST00000621131 TJP2Q9UDY2 1190 aa8.98□□□□□ -0.97
VPS29-212ENST00000621131 GNAT3A8MTJ3 354 aa8.97□□□□□ -0.97
VPS29-212ENST00000621131 PRR33A8MZF0 331 aa8.97□□□□□ -0.97
VPS29-212ENST00000621131 C22orf34Q6ZV56 151 aa8.97□□□□□ -0.97
VPS29-212ENST00000621131 MRPL41Q8IXM3 137 aaKnown RBP8.97□□□□□ -0.97
VPS29-212ENST00000621131 PI4K2BQ8TCG2 481 aa8.97□□□□□ -0.97
VPS29-212ENST00000621131 ASB11Q8WXH4 323 aa8.97□□□□□ -0.97
VPS29-212ENST00000621131 GOLGA2P5Q9HBQ8 144 aa8.97□□□□□ -0.97
VPS29-212ENST00000621131 FAM221AA4D161 298 aa8.96□□□□□ -0.98
VPS29-212ENST00000621131 RBAK-RBAKDNI3L0D1 243 aa8.96□□□□□ -0.98
VPS29-212ENST00000621131 PAPLNO95428 1278 aa8.96□□□□□ -0.98
VPS29-212ENST00000621131 PGRP06401 933 aa8.96□□□□□ -0.98
VPS29-212ENST00000621131 ZNF865P0CJ78 1059 aaPredicted RBP8.96□□□□□ -0.98
VPS29-212ENST00000621131 LMNB2Q03252 620 aa8.96□□□□□ -0.98
VPS29-212ENST00000621131 SFRP5Q5T4F7 317 aa8.96□□□□□ -0.98
VPS29-212ENST00000621131 LETMD1Q6P1Q0 360 aa8.96□□□□□ -0.98
VPS29-212ENST00000621131 ASIC4Q96FT7 647 aa8.96□□□□□ -0.98
VPS29-212ENST00000621131 RSRP1Q9BUV0 290 aa8.96□□□□□ -0.98
VPS29-212ENST00000621131 TPX2Q9ULW0 747 aaKnown RBP8.96□□□□□ -0.98
VPS29-212ENST00000621131 F6X3S4 739 aa8.95□□□□□ -0.98
VPS29-212ENST00000621131 PF4P02776 101 aa8.95□□□□□ -0.98
VPS29-212ENST00000621131 CLCN7P51798 805 aa8.95□□□□□ -0.98
VPS29-212ENST00000621131 CAMK2GQ13555 558 aaPredicted RBP8.95□□□□□ -0.98
VPS29-212ENST00000621131 ANGEL2Q5VTE6 544 aaKnown RBP8.95□□□□□ -0.98
VPS29-212ENST00000621131 SLC6A19Q695T7 634 aa8.95□□□□□ -0.98
VPS29-212ENST00000621131 BNC2Q6ZN30 1099 aaPredicted RBP8.95□□□□□ -0.98
VPS29-212ENST00000621131 MCATQ8IVS2 390 aaKnown RBP8.95□□□□□ -0.98
VPS29-212ENST00000621131 SEMA3GQ9NS98 782 aa8.95□□□□□ -0.98
VPS29-212ENST00000621131 VTI1BQ9UEU0 232 aa8.95□□□□□ -0.98
VPS29-212ENST00000621131 PITPNM2Q9BZ72 1349 aa8.95□□□□□ -0.98
VPS29-212ENST00000621131 CILPO75339 1184 aa8.94□□□□□ -0.98
VPS29-212ENST00000621131 SLC23A3Q6PIS1 610 aa8.94□□□□□ -0.98
VPS29-212ENST00000621131 XAGE3Q8WTP9 111 aa8.94□□□□□ -0.98
VPS29-212ENST00000621131 ACSF2Q96CM8 615 aaPredicted RBP8.94□□□□□ -0.98
VPS29-212ENST00000621131 TMEM87BQ96K49 555 aa8.94□□□□□ -0.98
VPS29-212ENST00000621131 MRS2Q9HD23 443 aa8.94□□□□□ -0.98
VPS29-212ENST00000621131 ADAM30Q9UKF2 790 aa8.94□□□□□ -0.98
VPS29-212ENST00000621131 PDE4BQ07343 736 aa8.93□□□□□ -0.98
VPS29-212ENST00000621131 ATG4DQ86TL0 474 aaPredicted RBP8.93□□□□□ -0.98
VPS29-212ENST00000621131 CDH24Q86UP0 819 aa8.93□□□□□ -0.98
VPS29-212ENST00000621131 RELL1Q8IUW5 271 aa8.93□□□□□ -0.98
VPS29-212ENST00000621131 LRRN4CLQ8ND94 238 aa8.93□□□□□ -0.98
VPS29-212ENST00000621131 GATAD2BQ8WXI9 593 aa8.93□□□□□ -0.98
VPS29-212ENST00000621131 RHOVQ96L33 236 aa8.93□□□□□ -0.98
VPS29-212ENST00000621131 HSPA12BQ96MM6 686 aa8.93□□□□□ -0.98
VPS29-212ENST00000621131 TMEM74Q96NL1 305 aa8.93□□□□□ -0.98
VPS29-212ENST00000621131 RC3H2Q9HBD1 1191 aaKnown RBP8.93□□□□□ -0.98
VPS29-212ENST00000621131 CORINQ9Y5Q5 1042 aa8.93□□□□□ -0.98
VPS29-212ENST00000621131 CAPN6Q9Y6Q1 641 aa8.93□□□□□ -0.98
VPS29-212ENST00000621131 ABCC9O60706 1549 aa8.92□□□□□ -0.98
VPS29-212ENST00000621131 F13A1P00488 732 aa8.92□□□□□ -0.98
VPS29-212ENST00000621131 MFSD4AQ8N468 514 aa8.92□□□□□ -0.98
VPS29-212ENST00000621131 DPH2Q9BQC3 489 aaPredicted RBP8.92□□□□□ -0.98
VPS29-212ENST00000621131 PRDM7Q9NQW5 492 aa8.92□□□□□ -0.98
VPS29-212ENST00000621131 ST14Q9Y5Y6 855 aa8.92□□□□□ -0.98
VPS29-212ENST00000621131 CARMIL2Q6F5E8 1435 aa8.91□□□□□ -0.98
VPS29-212ENST00000621131 BIN1O00499 593 aa8.91□□□□□ -0.98
VPS29-212ENST00000621131 ZP2Q05996 745 aa8.91□□□□□ -0.98
VPS29-212ENST00000621131 IKZF1Q13422 519 aa8.91□□□□□ -0.98
VPS29-212ENST00000621131 ZNF746Q6NUN9 644 aaPredicted RBP8.91□□□□□ -0.98
VPS29-212ENST00000621131 LMCD1Q9NZU5 365 aa8.91□□□□□ -0.98
VPS29-212ENST00000621131 FAM155AB1AL88 458 aaPredicted RBP8.9□□□□□ -0.98
VPS29-212ENST00000621131 CBX7O95931 251 aa8.9□□□□□ -0.98
VPS29-212ENST00000621131 GBP2P32456 591 aaPredicted RBP8.9□□□□□ -0.98
VPS29-212ENST00000621131 TMEM201Q5SNT2 666 aa8.9□□□□□ -0.98
VPS29-212ENST00000621131 CDKAL1Q5VV42 579 aa8.9□□□□□ -0.98
VPS29-212ENST00000621131 PRR36Q9H6K5 1346 aa8.89□□□□□ -0.99
VPS29-212ENST00000621131 MINDY4BA8MYZ0 360 aa8.89□□□□□ -0.99
VPS29-212ENST00000621131 UPK3BL1B0FP48 263 aa8.89□□□□□ -0.99
VPS29-212ENST00000621131 UPK3BL2E5RIL1 263 aa8.89□□□□□ -0.99
VPS29-212ENST00000621131 GARTP22102 1010 aa8.89□□□□□ -0.99
VPS29-212ENST00000621131 CYP7A1P22680 504 aa8.89□□□□□ -0.99
VPS29-212ENST00000621131 ITGAEP38570 1179 aa8.89□□□□□ -0.99
VPS29-212ENST00000621131 PWP1Q13610 501 aa8.89□□□□□ -0.99
VPS29-212ENST00000621131 LCE3BQ5TA77 95 aa8.89□□□□□ -0.99
VPS29-212ENST00000621131 DNAJB8Q8NHS0 232 aa8.89□□□□□ -0.99
VPS29-212ENST00000621131 PPP1R13LQ8WUF5 828 aa8.89□□□□□ -0.99
VPS29-212ENST00000621131 COX4I2Q96KJ9 171 aa8.89□□□□□ -0.99
VPS29-212ENST00000621131 BCL2L13Q9BXK5 485 aa8.89□□□□□ -0.99
VPS29-212ENST00000621131 ATP13A1Q9HD20 1204 aa8.89□□□□□ -0.99
VPS29-212ENST00000621131 CEP131Q9UPN4 1083 aa8.89□□□□□ -0.99
VPS29-212ENST00000621131 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.89□□□□□ -0.99
VPS29-212ENST00000621131 PLCG1P19174 1290 aa8.88□□□□□ -0.99
VPS29-212ENST00000621131 KIR3DL1P43629 444 aa8.88□□□□□ -0.99
VPS29-212ENST00000621131 OGFOD2Q6N063 350 aa8.88□□□□□ -0.99
VPS29-212ENST00000621131 ERMP1Q7Z2K6 904 aa8.88□□□□□ -0.99
VPS29-212ENST00000621131 H3BS24 57 aa8.87□□□□□ -0.99
VPS29-212ENST00000621131 BPNT1O95861 308 aa8.87□□□□□ -0.99
VPS29-212ENST00000621131 FAM160A1Q05DH4 1040 aa8.87□□□□□ -0.99
VPS29-212ENST00000621131 TNK2Q07912 1038 aa8.87□□□□□ -0.99
VPS29-212ENST00000621131 MRPL58Q14197 206 aaKnown RBP8.87□□□□□ -0.99
VPS29-212ENST00000621131 DIEXFQ68CQ4 756 aaKnown RBP8.87□□□□□ -0.99
VPS29-212ENST00000621131 COPRSQ9NQ92 184 aa8.87□□□□□ -0.99
VPS29-212ENST00000621131 POLR3KQ9Y2Y1 108 aaPredicted RBP8.87□□□□□ -0.99
VPS29-212ENST00000621131 ZNF326Q5BKZ1 582 aaKnown RBP8.86□□□□□ -0.99
VPS29-212ENST00000621131 THAP5Q7Z6K1 395 aa8.86□□□□□ -0.99
VPS29-212ENST00000621131 GOLM1Q8NBJ4 401 aa8.86□□□□□ -0.99
VPS29-212ENST00000621131 FLAD1Q8NFF5 587 aa8.86□□□□□ -0.99
VPS29-212ENST00000621131 GIPC2Q8TF65 315 aa8.86□□□□□ -0.99
VPS29-212ENST00000621131 UBE2FQ969M7 185 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 132.1 ms