RNA–Protein interactions for RNA: ENST00000620945.1

NUCB2-219, Transcript of nucleobindin 2, humanhuman

TSL 5

Gene NUCB2, Length 1,563 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUCB2-219ENST00000620945 GJA8P48165 433 aa13.88□□□□□ -0.19
NUCB2-219ENST00000620945 GCLCP48506 637 aaPredicted RBP13.88□□□□□ -0.19
NUCB2-219ENST00000620945 IRX3P78415 501 aaPredicted RBP13.88□□□□□ -0.19
NUCB2-219ENST00000620945 SHROOM1Q2M3G4 852 aaPredicted RBP13.88□□□□□ -0.19
NUCB2-219ENST00000620945 HSP90AB4PQ58FF6 505 aa13.88□□□□□ -0.19
NUCB2-219ENST00000620945 SH3D19Q5HYK7 790 aa13.88□□□□□ -0.19
NUCB2-219ENST00000620945 ASCC2Q9H1I8 757 aaPredicted RBP13.88□□□□□ -0.19
NUCB2-219ENST00000620945 IL1RAPL2Q9NP60 686 aa13.88□□□□□ -0.19
NUCB2-219ENST00000620945 TMOD4Q9NZQ9 345 aa13.88□□□□□ -0.19
NUCB2-219ENST00000620945 MS4A1P11836 297 aa13.87□□□□□ -0.19
NUCB2-219ENST00000620945 USP5P45974 858 aa13.87□□□□□ -0.19
NUCB2-219ENST00000620945 MAP3K12Q12852 859 aa13.87□□□□□ -0.19
NUCB2-219ENST00000620945 IRF5Q13568 498 aa13.87□□□□□ -0.19
NUCB2-219ENST00000620945 METTL16Q86W50 562 aaKnown RBP13.87□□□□□ -0.19
NUCB2-219ENST00000620945 PXYLP1Q8TE99 480 aa13.87□□□□□ -0.19
NUCB2-219ENST00000620945 WDR18Q9BV38 432 aa13.87□□□□□ -0.19
NUCB2-219ENST00000620945 UNC93B1Q9H1C4 597 aa13.87□□□□□ -0.19
NUCB2-219ENST00000620945 ANTXR1Q9H6X2 564 aa13.87□□□□□ -0.19
NUCB2-219ENST00000620945 BACE1P56817 501 aa13.86□□□□□ -0.19
NUCB2-219ENST00000620945 HABP4Q5JVS0 413 aaKnown RBP13.86□□□□□ -0.19
NUCB2-219ENST00000620945 TMED8Q6PL24 325 aaPredicted RBP13.86□□□□□ -0.19
NUCB2-219ENST00000620945 FOXP4Q8IVH2 680 aaPredicted RBP13.86□□□□□ -0.19
NUCB2-219ENST00000620945 RHPN1Q8TCX5 695 aa13.86□□□□□ -0.19
NUCB2-219ENST00000620945 U2AF1L4Q8WU68 220 aaKnown RBP13.86□□□□□ -0.19
NUCB2-219ENST00000620945 GINM1Q9NU53 330 aa13.86□□□□□ -0.19
NUCB2-219ENST00000620945 DDX19BQ9UMR2 479 aa13.86□□□□□ -0.19
NUCB2-219ENST00000620945 APBB1O00213 710 aa13.85□□□□□ -0.19
NUCB2-219ENST00000620945 HMMRO75330 724 aa13.85□□□□□ -0.19
NUCB2-219ENST00000620945 JAG1P78504 1218 aa13.85□□□□□ -0.19
NUCB2-219ENST00000620945 ALPK3Q96L96 1907 aa13.84□□□□□ -0.19
NUCB2-219ENST00000620945 USP17L10C9JJH3 530 aa13.84□□□□□ -0.19
NUCB2-219ENST00000620945 FARP2O94887 1054 aaPredicted RBP13.84□□□□□ -0.19
NUCB2-219ENST00000620945 TTF1Q15361 905 aaPredicted RBP13.84□□□□□ -0.19
NUCB2-219ENST00000620945 CLASRPQ8N2M8 674 aaKnown RBP13.84□□□□□ -0.19
NUCB2-219ENST00000620945 EHD4Q9H223 541 aa13.84□□□□□ -0.19
NUCB2-219ENST00000620945 SERPINB13Q9UIV8 391 aa13.84□□□□□ -0.19
NUCB2-219ENST00000620945 LAMA3Q16787 3333 aa13.84□□□□□ -0.19
NUCB2-219ENST00000620945 C19orf81C9J6K1 198 aa13.83□□□□□ -0.19
NUCB2-219ENST00000620945 GH2P01242 217 aa13.83□□□□□ -0.19
NUCB2-219ENST00000620945 HMGCRP04035 888 aa13.83□□□□□ -0.19
NUCB2-219ENST00000620945 HERVK_113P62684 666 aa13.83□□□□□ -0.19
NUCB2-219ENST00000620945 UBE2Q1Q7Z7E8 422 aa13.83□□□□□ -0.19
NUCB2-219ENST00000620945 KIF1BPQ96EK5 621 aa13.83□□□□□ -0.19
NUCB2-219ENST00000620945 DNAJC2Q99543 621 aaKnown RBP13.83□□□□□ -0.19
NUCB2-219ENST00000620945 FEZ1Q99689 392 aa13.83□□□□□ -0.19
NUCB2-219ENST00000620945 HTATIP2Q9BUP3 242 aa13.83□□□□□ -0.19
NUCB2-219ENST00000620945 MORF4L1Q9UBU8 362 aa13.83□□□□□ -0.19
NUCB2-219ENST00000620945 COG6Q9Y2V7 657 aa13.83□□□□□ -0.19
NUCB2-219ENST00000620945 FRMPD3Q5JV73 1810 aa13.83□□□□□ -0.19
NUCB2-219ENST00000620945 BAZ2AQ9UIF9 1905 aaKnown RBP13.83□□□□□ -0.19
NUCB2-219ENST00000620945 SZT2Q5T011 3432 aa13.83□□□□□ -0.2
NUCB2-219ENST00000620945 A0A0G2JMZ2 1700 aa13.83□□□□□ -0.2
NUCB2-219ENST00000620945 H0YGN5 161 aa13.83□□□□□ -0.2
NUCB2-219ENST00000620945 HOXA7P31268 230 aaPredicted RBP13.83□□□□□ -0.2
NUCB2-219ENST00000620945 RPAP2Q8IXW5 612 aaPredicted RBP13.83□□□□□ -0.2
NUCB2-219ENST00000620945 RIOK1Q9BRS2 568 aaKnown RBP13.83□□□□□ -0.2
NUCB2-219ENST00000620945 BCL11AQ9H165 835 aa13.83□□□□□ -0.2
NUCB2-219ENST00000620945 PAK6Q9NQU5 681 aaPredicted RBP13.83□□□□□ -0.2
NUCB2-219ENST00000620945 PCDH10Q9P2E7 1040 aa13.83□□□□□ -0.2
NUCB2-219ENST00000620945 TRIOBPQ9H2D6 2365 aa13.82□□□□□ -0.2
NUCB2-219ENST00000620945 MAGEB6P1A0A0J9YX57 407 aa13.82□□□□□ -0.2
NUCB2-219ENST00000620945 SGPL1O95470 568 aa13.82□□□□□ -0.2
NUCB2-219ENST00000620945 IFIT2P09913 472 aaKnown RBP13.82□□□□□ -0.2
NUCB2-219ENST00000620945 PDE6AP16499 860 aa13.82□□□□□ -0.2
NUCB2-219ENST00000620945 ZYXQ15942 572 aaKnown RBP13.82□□□□□ -0.2
NUCB2-219ENST00000620945 TATDN1Q6P1N9 297 aa13.82□□□□□ -0.2
NUCB2-219ENST00000620945 TTC6Q86TZ1 520 aa13.82□□□□□ -0.2
NUCB2-219ENST00000620945 SOCS4Q8WXH5 440 aa13.82□□□□□ -0.2
NUCB2-219ENST00000620945 DPF3Q92784 378 aa13.82□□□□□ -0.2
NUCB2-219ENST00000620945 DEFB118Q96PH6 123 aa13.82□□□□□ -0.2
NUCB2-219ENST00000620945 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.82□□□□□ -0.2
NUCB2-219ENST00000620945 GOLIM4O00461 696 aa13.81□□□□□ -0.2
NUCB2-219ENST00000620945 RAB3GAP1Q15042 981 aa13.81□□□□□ -0.2
NUCB2-219ENST00000620945 SLC9C2Q5TAH2 1124 aa13.81□□□□□ -0.2
NUCB2-219ENST00000620945 USP17L2Q6R6M4 530 aa13.81□□□□□ -0.2
NUCB2-219ENST00000620945 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.81□□□□□ -0.2
NUCB2-219ENST00000620945 GTF3C2Q8WUA4 911 aaPredicted RBP13.81□□□□□ -0.2
NUCB2-219ENST00000620945 CRNKL1Q9BZJ0 848 aaKnown RBP13.81□□□□□ -0.2
NUCB2-219ENST00000620945 TXNRD2Q9NNW7 524 aa13.81□□□□□ -0.2
NUCB2-219ENST00000620945 ZBTB40Q9NUA8 1239 aa13.81□□□□□ -0.2
NUCB2-219ENST00000620945 COLQQ9Y215 455 aaPredicted RBP13.81□□□□□ -0.2
NUCB2-219ENST00000620945 ZNF532Q9HCE3 1301 aa13.8□□□□□ -0.2
NUCB2-219ENST00000620945 PEX10O60683 326 aa13.8□□□□□ -0.2
NUCB2-219ENST00000620945 PDE3AQ14432 1141 aa13.8□□□□□ -0.2
NUCB2-219ENST00000620945 ABCB5Q2M3G0 1257 aa13.8□□□□□ -0.2
NUCB2-219ENST00000620945 SIRT2Q8IXJ6 389 aa13.8□□□□□ -0.2
NUCB2-219ENST00000620945 GPRC5AQ8NFJ5 357 aa13.8□□□□□ -0.2
NUCB2-219ENST00000620945 P2RX7Q99572 595 aaKnown RBP13.8□□□□□ -0.2
NUCB2-219ENST00000620945 PAGR1Q9BTK6 254 aa13.8□□□□□ -0.2
NUCB2-219ENST00000620945 CHMP4BQ9H444 224 aaKnown RBP13.8□□□□□ -0.2
NUCB2-219ENST00000620945 EMILIN3Q9NT22 766 aa13.8□□□□□ -0.2
NUCB2-219ENST00000620945 RCAN3Q9UKA8 241 aa13.8□□□□□ -0.2
NUCB2-219ENST00000620945 POLR3DP05423 398 aaPredicted RBP13.79□□□□□ -0.2
NUCB2-219ENST00000620945 SHMT1P34896 483 aa13.79□□□□□ -0.2
NUCB2-219ENST00000620945 USP14P54578 494 aa13.79□□□□□ -0.2
NUCB2-219ENST00000620945 ERVK-9P63128 1117 aa13.79□□□□□ -0.2
NUCB2-219ENST00000620945 ERVK-24P63145 666 aa13.79□□□□□ -0.2
NUCB2-219ENST00000620945 CERKLQ49MI3 558 aaPredicted RBP13.79□□□□□ -0.2
NUCB2-219ENST00000620945 CHRDL2Q6WN34 429 aa13.79□□□□□ -0.2
NUCB2-219ENST00000620945 TRIB2Q92519 343 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms