RNA–Protein interactions for RNA: ENST00000620882.4

LRRC39-204, Transcript of leucine rich repeat containing 39, humanhuman

TSL 5 BASIC

Gene LRRC39, Length 1,951 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC39-204ENST00000620882 ODR4Q5SWX8 454 aa5.31□□□□□ -1.56
LRRC39-204ENST00000620882 NIM1KQ8IY84 436 aa5.31□□□□□ -1.56
LRRC39-204ENST00000620882 WDR18Q9BV38 432 aa5.31□□□□□ -1.56
LRRC39-204ENST00000620882 SOX17Q9H6I2 414 aaPredicted RBP5.31□□□□□ -1.56
LRRC39-204ENST00000620882 GABBR1Q9UBS5 961 aa5.31□□□□□ -1.56
LRRC39-204ENST00000620882 APEX2Q9UBZ4 518 aa5.31□□□□□ -1.56
LRRC39-204ENST00000620882 ZNF214Q9UL59 606 aaPredicted RBP5.31□□□□□ -1.56
LRRC39-204ENST00000620882 FAN1Q9Y2M0 1017 aa5.31□□□□□ -1.56
LRRC39-204ENST00000620882 HIF3AQ9Y2N7 669 aa5.31□□□□□ -1.56
LRRC39-204ENST00000620882 ELOA3CA0A087WX78 387 aaPredicted RBP5.3□□□□□ -1.56
LRRC39-204ENST00000620882 LOC100289279A0A1B0GTE1 492 aa5.3□□□□□ -1.56
LRRC39-204ENST00000620882 A0A1W2PQU0 124 aa5.3□□□□□ -1.56
LRRC39-204ENST00000620882 ELOA3DA6NLF2 546 aaPredicted RBP5.3□□□□□ -1.56
LRRC39-204ENST00000620882 PDE8AO60658 829 aa5.3□□□□□ -1.56
LRRC39-204ENST00000620882 PGRP06401 933 aa5.3□□□□□ -1.56
LRRC39-204ENST00000620882 ELOA3BQ3SY89 546 aa5.3□□□□□ -1.56
LRRC39-204ENST00000620882 GNPTABQ3T906 1256 aa5.3□□□□□ -1.56
LRRC39-204ENST00000620882 RNFT1Q5M7Z0 435 aa5.3□□□□□ -1.56
LRRC39-204ENST00000620882 TMEM201Q5SNT2 666 aa5.3□□□□□ -1.56
LRRC39-204ENST00000620882 INTS3Q68E01 1043 aaKnown RBP5.3□□□□□ -1.56
LRRC39-204ENST00000620882 SCARA3Q6AZY7 606 aa5.3□□□□□ -1.56
LRRC39-204ENST00000620882 HDXQ7Z353 690 aa5.3□□□□□ -1.56
LRRC39-204ENST00000620882 KRT26Q7Z3Y9 468 aa5.3□□□□□ -1.56
LRRC39-204ENST00000620882 RNF180Q86T96 592 aa5.3□□□□□ -1.56
LRRC39-204ENST00000620882 FERMT3Q86UX7 667 aa5.3□□□□□ -1.56
LRRC39-204ENST00000620882 CERS3Q8IU89 383 aa5.3□□□□□ -1.56
LRRC39-204ENST00000620882 ZSWIM2Q8NEG5 633 aa5.3□□□□□ -1.56
LRRC39-204ENST00000620882 ELOA3Q8NG57 546 aa5.3□□□□□ -1.56
LRRC39-204ENST00000620882 NINJ1Q92982 152 aa5.3□□□□□ -1.56
LRRC39-204ENST00000620882 KISS1RQ969F8 398 aaPredicted RBP5.3□□□□□ -1.56
LRRC39-204ENST00000620882 ELMO3Q96BJ8 720 aa5.3□□□□□ -1.56
LRRC39-204ENST00000620882 USP26Q9BXU7 913 aa5.3□□□□□ -1.56
LRRC39-204ENST00000620882 PHAXQ9H814 394 aaKnown RBP5.3□□□□□ -1.56
LRRC39-204ENST00000620882 NCOA5Q9HCD5 579 aaKnown RBP5.3□□□□□ -1.56
LRRC39-204ENST00000620882 KCNK4Q9NYG8 393 aa5.3□□□□□ -1.56
LRRC39-204ENST00000620882 TJP2Q9UDY2 1190 aa5.3□□□□□ -1.56
LRRC39-204ENST00000620882 SNCAIPQ9Y6H5 919 aa5.3□□□□□ -1.56
LRRC39-204ENST00000620882 CBFA2T2O43439 604 aa5.29□□□□□ -1.56
LRRC39-204ENST00000620882 UBOX5O94941 541 aa5.29□□□□□ -1.56
LRRC39-204ENST00000620882 TP53P04637 393 aaPredicted RBP5.29□□□□□ -1.56
LRRC39-204ENST00000620882 CYP11A1P05108 521 aa5.29□□□□□ -1.56
LRRC39-204ENST00000620882 PIP4K2BP78356 416 aa5.29□□□□□ -1.56
LRRC39-204ENST00000620882 BRDTQ58F21 947 aaPredicted RBP5.29□□□□□ -1.56
LRRC39-204ENST00000620882 DDX42Q86XP3 938 aaKnown RBP eCLIP5.29□□□□□ -1.56
LRRC39-204ENST00000620882 FMNL3Q8IVF7 1028 aa5.29□□□□□ -1.56
LRRC39-204ENST00000620882 MFSD3Q96ES6 412 aa5.29□□□□□ -1.56
LRRC39-204ENST00000620882 SLC6A18Q96N87 628 aa5.29□□□□□ -1.56
LRRC39-204ENST00000620882 AVENQ9NQS1 362 aaPredicted RBP5.29□□□□□ -1.56
LRRC39-204ENST00000620882 LRRC4BQ9NT99 713 aa5.29□□□□□ -1.56
LRRC39-204ENST00000620882 PLAAQ9Y263 795 aa5.29□□□□□ -1.56
LRRC39-204ENST00000620882 DLL1O00548 723 aa5.29□□□□□ -1.56
LRRC39-204ENST00000620882 MAP4K4O95819 1239 aaPredicted RBP5.29□□□□□ -1.56
LRRC39-204ENST00000620882 EPHX1P07099 455 aa5.29□□□□□ -1.56
LRRC39-204ENST00000620882 SDSP20132 328 aa5.29□□□□□ -1.56
LRRC39-204ENST00000620882 CNGA1P29973 690 aa5.29□□□□□ -1.56
LRRC39-204ENST00000620882 SETDB1Q15047 1291 aa5.29□□□□□ -1.56
LRRC39-204ENST00000620882 KIF4BQ2VIQ3 1234 aa5.29□□□□□ -1.56
LRRC39-204ENST00000620882 FOXD4L6Q3SYB3 417 aaPredicted RBP5.29□□□□□ -1.56
LRRC39-204ENST00000620882 FOXD4L3Q6VB84 417 aaPredicted RBP5.29□□□□□ -1.56
LRRC39-204ENST00000620882 STRA8Q7Z7C7 330 aa5.29□□□□□ -1.56
LRRC39-204ENST00000620882 NANOS1Q8WY41 292 aaKnown RBP5.29□□□□□ -1.56
LRRC39-204ENST00000620882 TTC9Q92623 222 aa5.29□□□□□ -1.56
LRRC39-204ENST00000620882 TSR2Q969E8 191 aaKnown RBP5.29□□□□□ -1.56
LRRC39-204ENST00000620882 ZNF669Q96BR6 464 aaPredicted RBP5.29□□□□□ -1.56
LRRC39-204ENST00000620882 ZNF512BQ96KM6 892 aaPredicted RBP5.29□□□□□ -1.56
LRRC39-204ENST00000620882 TARS2Q9BW92 718 aaKnown RBP5.29□□□□□ -1.56
LRRC39-204ENST00000620882 KRT82Q9NSB4 513 aa5.29□□□□□ -1.56
LRRC39-204ENST00000620882 SLC7A5Q01650 507 aa5.28□□□□□ -1.56
LRRC39-204ENST00000620882 NCAPHQ15003 741 aa5.28□□□□□ -1.56
LRRC39-204ENST00000620882 SV2AQ7L0J3 742 aa5.28□□□□□ -1.56
LRRC39-204ENST00000620882 SGSM3Q96HU1 749 aa5.28□□□□□ -1.56
LRRC39-204ENST00000620882 HOMER2Q9NSB8 354 aa5.28□□□□□ -1.56
LRRC39-204ENST00000620882 PPP1R9AQ9ULJ8 1098 aa5.28□□□□□ -1.56
LRRC39-204ENST00000620882 MRPS23Q9Y3D9 190 aaKnown RBP5.28□□□□□ -1.56
LRRC39-204ENST00000620882 TACC3Q9Y6A5 838 aa5.28□□□□□ -1.56
LRRC39-204ENST00000620882 GSG1L2A8MUP6 293 aa5.27□□□□□ -1.57
LRRC39-204ENST00000620882 RAG1P15918 1043 aa5.27□□□□□ -1.57
LRRC39-204ENST00000620882 ETF1P62495 437 aaKnown RBP5.27□□□□□ -1.57
LRRC39-204ENST00000620882 AXDND1Q5T1B0 1012 aaPredicted RBP5.27□□□□□ -1.57
LRRC39-204ENST00000620882 DCAF15Q66K64 600 aa5.27□□□□□ -1.57
LRRC39-204ENST00000620882 FOXR1Q6PIV2 292 aa5.27□□□□□ -1.57
LRRC39-204ENST00000620882 LHFPL2Q6ZUX7 228 aa5.27□□□□□ -1.57
LRRC39-204ENST00000620882 ZNF513Q8N8E2 541 aaPredicted RBP5.27□□□□□ -1.57
LRRC39-204ENST00000620882 DDX54Q8TDD1 881 aaKnown RBP5.27□□□□□ -1.57
LRRC39-204ENST00000620882 KIF2CQ99661 725 aa5.27□□□□□ -1.57
LRRC39-204ENST00000620882 FAM177BA6PVY3 158 aa5.27□□□□□ -1.57
LRRC39-204ENST00000620882 M0R082 166 aa5.27□□□□□ -1.57
LRRC39-204ENST00000620882 AOC2O75106 756 aa5.27□□□□□ -1.57
LRRC39-204ENST00000620882 DEAF1O75398 565 aaPredicted RBP5.27□□□□□ -1.57
LRRC39-204ENST00000620882 PPP2R2AP63151 447 aa5.27□□□□□ -1.57
LRRC39-204ENST00000620882 SV2CQ496J9 727 aa5.27□□□□□ -1.57
LRRC39-204ENST00000620882 ZBTB37Q5TC79 503 aa5.27□□□□□ -1.57
LRRC39-204ENST00000620882 SLFN12Q8IYM2 578 aa5.27□□□□□ -1.57
LRRC39-204ENST00000620882 FAM13CQ8NE31 585 aa5.27□□□□□ -1.57
LRRC39-204ENST00000620882 ZNF417Q8TAU3 575 aa5.27□□□□□ -1.57
LRRC39-204ENST00000620882 UBASH3BQ8TF42 649 aa5.27□□□□□ -1.57
LRRC39-204ENST00000620882 FGD4Q96M96 766 aa5.27□□□□□ -1.57
LRRC39-204ENST00000620882 ZNF587Q96SQ5 575 aaPredicted RBP5.27□□□□□ -1.57
LRRC39-204ENST00000620882 HAUS7Q99871 368 aa5.27□□□□□ -1.57
LRRC39-204ENST00000620882 WNT10AQ9GZT5 417 aa5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms