RNA–Protein interactions for RNA: ENST00000620709.4

CD40-207, Transcript of CD40 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD40, Length 1,522 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD40-207ENST00000620709 ANKRD13CQ8N6S4 541 aa19.49■□□□□ 0.71
CD40-207ENST00000620709 TAOK2Q9UL54 1235 aa19.49■□□□□ 0.71
CD40-207ENST00000620709 NUCB1Q02818 461 aa19.48■□□□□ 0.71
CD40-207ENST00000620709 MTFR1Q15390 333 aa19.48■□□□□ 0.71
CD40-207ENST00000620709 CLASRPQ8N2M8 674 aaKnown RBP19.48■□□□□ 0.71
CD40-207ENST00000620709 PROCA1Q8NCQ7 364 aaPredicted RBP19.48■□□□□ 0.71
CD40-207ENST00000620709 TBC1D2Q9BYX2 928 aa19.48■□□□□ 0.71
CD40-207ENST00000620709 GABRQQ9UN88 632 aa19.48■□□□□ 0.71
CD40-207ENST00000620709 SIPA1L1O43166 1804 aa19.48■□□□□ 0.71
CD40-207ENST00000620709 FOCADQ5VW36 1801 aa19.47■□□□□ 0.71
CD40-207ENST00000620709 TNPO2O14787 897 aaKnown RBP19.47■□□□□ 0.71
CD40-207ENST00000620709 IFIT2P09913 472 aaKnown RBP19.47■□□□□ 0.71
CD40-207ENST00000620709 KIF1BPQ96EK5 621 aa19.47■□□□□ 0.71
CD40-207ENST00000620709 DNAJC2Q99543 621 aaKnown RBP19.47■□□□□ 0.71
CD40-207ENST00000620709 ASNSP08243 561 aa19.46■□□□□ 0.71
CD40-207ENST00000620709 PABPC4Q13310 644 aaKnown RBP eCLIP19.46■□□□□ 0.71
CD40-207ENST00000620709 MTMR2Q13614 643 aa19.46■□□□□ 0.71
CD40-207ENST00000620709 SHROOM1Q2M3G4 852 aaPredicted RBP19.46■□□□□ 0.71
CD40-207ENST00000620709 DNAJC18Q9H819 358 aa19.46■□□□□ 0.71
CD40-207ENST00000620709 TMOD4Q9NZQ9 345 aa19.46■□□□□ 0.71
CD40-207ENST00000620709 IGSF3O75054 1194 aa19.46■□□□□ 0.71
CD40-207ENST00000620709 JAG1P78504 1218 aa19.46■□□□□ 0.71
CD40-207ENST00000620709 CHD1LQ86WJ1 897 aa19.46■□□□□ 0.71
CD40-207ENST00000620709 MYH1P12882 1939 aa19.45■□□□□ 0.7
CD40-207ENST00000620709 FLT3LGP49771 235 aa19.45■□□□□ 0.7
CD40-207ENST00000620709 UBXN2AP68543 259 aa19.45■□□□□ 0.7
CD40-207ENST00000620709 ANKRD45Q5TZF3 282 aa19.45■□□□□ 0.7
CD40-207ENST00000620709 LOC285556D6RIA3 1793 aa19.44■□□□□ 0.7
CD40-207ENST00000620709 MAGEB6P1A0A0J9YX57 407 aa19.44■□□□□ 0.7
CD40-207ENST00000620709 GOLIM4O00461 696 aa19.44■□□□□ 0.7
CD40-207ENST00000620709 ADCY3O60266 1144 aa19.44■□□□□ 0.7
CD40-207ENST00000620709 CCL5P13501 91 aa19.44■□□□□ 0.7
CD40-207ENST00000620709 IRX3P78415 501 aaPredicted RBP19.44■□□□□ 0.7
CD40-207ENST00000620709 TTF1Q15361 905 aaPredicted RBP19.44■□□□□ 0.7
CD40-207ENST00000620709 CERS3Q8IU89 383 aa19.44■□□□□ 0.7
CD40-207ENST00000620709 COA7Q96BR5 231 aa19.44■□□□□ 0.7
CD40-207ENST00000620709 WDR18Q9BV38 432 aa19.44■□□□□ 0.7
CD40-207ENST00000620709 RNF208Q9H0X6 261 aa19.44■□□□□ 0.7
CD40-207ENST00000620709 ASCC2Q9H1I8 757 aaPredicted RBP19.44■□□□□ 0.7
CD40-207ENST00000620709 ZBTB47Q9UFB7 747 aaPredicted RBP19.44■□□□□ 0.7
CD40-207ENST00000620709 ZBTB21Q9ULJ3 1066 aa19.44■□□□□ 0.7
CD40-207ENST00000620709 SLC34A2O95436 690 aa19.43■□□□□ 0.7
CD40-207ENST00000620709 ELNP15502 786 aa19.43■□□□□ 0.7
CD40-207ENST00000620709 BACE1P56817 501 aa19.43■□□□□ 0.7
CD40-207ENST00000620709 SLC9C2Q5TAH2 1124 aa19.43■□□□□ 0.7
CD40-207ENST00000620709 SLAIN1Q8ND83 568 aa19.43■□□□□ 0.7
CD40-207ENST00000620709 LNPKQ9C0E8 428 aa19.43■□□□□ 0.7
CD40-207ENST00000620709 RAB11FIP3O75154 756 aa19.42■□□□□ 0.7
CD40-207ENST00000620709 GCLCP48506 637 aaPredicted RBP19.42■□□□□ 0.7
CD40-207ENST00000620709 FAM110CQ1W6H9 321 aa19.42■□□□□ 0.7
CD40-207ENST00000620709 SH3D19Q5HYK7 790 aa19.42■□□□□ 0.7
CD40-207ENST00000620709 USP17L10C9JJH3 530 aa19.41■□□□□ 0.7
CD40-207ENST00000620709 GH2P01242 217 aa19.41■□□□□ 0.7
CD40-207ENST00000620709 POLR3DP05423 398 aaPredicted RBP19.41■□□□□ 0.7
CD40-207ENST00000620709 TTC6Q86TZ1 520 aa19.41■□□□□ 0.7
CD40-207ENST00000620709 METTL16Q86W50 562 aaKnown RBP19.41■□□□□ 0.7
CD40-207ENST00000620709 EDC3Q96F86 508 aaKnown RBP19.41■□□□□ 0.7
CD40-207ENST00000620709 PDE6AP16499 860 aa19.41■□□□□ 0.7
CD40-207ENST00000620709 PDE4AP27815 886 aa19.41■□□□□ 0.7
CD40-207ENST00000620709 ZYXQ15942 572 aaKnown RBP19.41■□□□□ 0.7
CD40-207ENST00000620709 BOLA2Q9H3K6 86 aa19.41■□□□□ 0.7
CD40-207ENST00000620709 TSHZ2Q9NRE2 1034 aa19.41■□□□□ 0.7
CD40-207ENST00000620709 SERPINB13Q9UIV8 391 aa19.41■□□□□ 0.7
CD40-207ENST00000620709 ZNF532Q9HCE3 1301 aa19.4■□□□□ 0.7
CD40-207ENST00000620709 C19orf81C9J6K1 198 aa19.4■□□□□ 0.7
CD40-207ENST00000620709 INHAP05111 366 aa19.4■□□□□ 0.7
CD40-207ENST00000620709 RAB3GAP1Q15042 981 aa19.4■□□□□ 0.7
CD40-207ENST00000620709 P2RX7Q99572 595 aaKnown RBP19.4■□□□□ 0.7
CD40-207ENST00000620709 FEZ1Q99689 392 aa19.4■□□□□ 0.7
CD40-207ENST00000620709 CRNKL1Q9BZJ0 848 aaKnown RBP19.4■□□□□ 0.7
CD40-207ENST00000620709 UNC93B1Q9H1C4 597 aa19.4■□□□□ 0.7
CD40-207ENST00000620709 GINM1Q9NU53 330 aa19.4■□□□□ 0.7
CD40-207ENST00000620709 PEX10O60683 326 aa19.39■□□□□ 0.69
CD40-207ENST00000620709 CERKLQ49MI3 558 aaPredicted RBP19.39■□□□□ 0.69
CD40-207ENST00000620709 TMED8Q6PL24 325 aaPredicted RBP19.39■□□□□ 0.69
CD40-207ENST00000620709 NKX2-3Q8TAU0 364 aa19.39■□□□□ 0.69
CD40-207ENST00000620709 SHISA4Q96DD7 197 aa19.39■□□□□ 0.69
CD40-207ENST00000620709 RIOK1Q9BRS2 568 aaKnown RBP19.39■□□□□ 0.69
CD40-207ENST00000620709 GJB1P08034 283 aa19.38■□□□□ 0.69
CD40-207ENST00000620709 PLCD1P51178 756 aa19.38■□□□□ 0.69
CD40-207ENST00000620709 ABCB5Q2M3G0 1257 aa19.38■□□□□ 0.69
CD40-207ENST00000620709 USP17L2Q6R6M4 530 aa19.38■□□□□ 0.69
CD40-207ENST00000620709 PPIL4Q8WUA2 492 aaKnown RBP eCLIP19.38■□□□□ 0.69
CD40-207ENST00000620709 PAG1Q9NWQ8 432 aa19.38■□□□□ 0.69
CD40-207ENST00000620709 MCM9Q9NXL9 1143 aa19.38■□□□□ 0.69
CD40-207ENST00000620709 DOCK3Q8IZD9 2030 aa19.38■□□□□ 0.69
CD40-207ENST00000620709 SMARCA5O60264 1052 aaPredicted RBP19.37■□□□□ 0.69
CD40-207ENST00000620709 PAGR1Q9BTK6 254 aa19.37■□□□□ 0.69
CD40-207ENST00000620709 EHD4Q9H223 541 aa19.37■□□□□ 0.69
CD40-207ENST00000620709 CABP5Q9NP86 173 aa19.37■□□□□ 0.69
CD40-207ENST00000620709 NAV1Q8NEY1 1877 aa19.37■□□□□ 0.69
CD40-207ENST00000620709 MPHOSPH10O00566 681 aaKnown RBP19.36■□□□□ 0.69
CD40-207ENST00000620709 GJA8P48165 433 aa19.36■□□□□ 0.69
CD40-207ENST00000620709 HERVK_113P62684 666 aa19.36■□□□□ 0.69
CD40-207ENST00000620709 IRF5Q13568 498 aa19.36■□□□□ 0.69
CD40-207ENST00000620709 SLFNL1Q499Z3 407 aa19.36■□□□□ 0.69
CD40-207ENST00000620709 TATDN1Q6P1N9 297 aa19.36■□□□□ 0.69
CD40-207ENST00000620709 CCAR1Q8IX12 1150 aaKnown RBP19.36■□□□□ 0.69
CD40-207ENST00000620709 LCORLQ8N3X6 602 aa19.36■□□□□ 0.69
CD40-207ENST00000620709 PXYLP1Q8TE99 480 aa19.36■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms