RNA–Protein interactions for RNA: ENST00000620466.4

ALMS1-208, Transcript of ALMS1, centrosome and basal body associated protein, humanhuman

TSL 2

Gene ALMS1, Length 6,720 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1-208ENST00000620466 PPP1R13BQ96KQ4 1090 aa9.36□□□□□ -0.91
ALMS1-208ENST00000620466 VEZTQ9HBM0 779 aa9.36□□□□□ -0.91
ALMS1-208ENST00000620466 ZDHHC9Q9Y397 364 aa9.36□□□□□ -0.91
ALMS1-208ENST00000620466 PARP3Q9Y6F1 533 aa9.36□□□□□ -0.91
ALMS1-208ENST00000620466 TMEM110-MUSTN1A8MSY1 372 aa9.36□□□□□ -0.91
ALMS1-208ENST00000620466 CCNT1O60563 726 aaKnown RBP9.36□□□□□ -0.91
ALMS1-208ENST00000620466 GNA11P29992 359 aa9.36□□□□□ -0.91
ALMS1-208ENST00000620466 SV2BQ7L1I2 683 aa9.36□□□□□ -0.91
ALMS1-208ENST00000620466 ZNF215Q9UL58 517 aaPredicted RBP9.36□□□□□ -0.91
ALMS1-208ENST00000620466 OAS2P29728 719 aaKnown RBP9.36□□□□□ -0.91
ALMS1-208ENST00000620466 PPARAQ07869 468 aa9.36□□□□□ -0.91
ALMS1-208ENST00000620466 AKNAD1Q5T1N1 836 aa9.36□□□□□ -0.91
ALMS1-208ENST00000620466 CLEC17AQ6ZS10 378 aa9.36□□□□□ -0.91
ALMS1-208ENST00000620466 OTUD6BQ8N6M0 293 aa9.36□□□□□ -0.91
ALMS1-208ENST00000620466 IFT81Q8WYA0 676 aa9.36□□□□□ -0.91
ALMS1-208ENST00000620466 MED23Q9ULK4 1368 aa9.36□□□□□ -0.91
ALMS1-208ENST00000620466 A2ML1A8K2U0 1454 aa9.36□□□□□ -0.91
ALMS1-208ENST00000620466 A0A087WWV3 80 aa9.36□□□□□ -0.91
ALMS1-208ENST00000620466 ADD1P35611 737 aaKnown RBP9.36□□□□□ -0.91
ALMS1-208ENST00000620466 RESTQ13127 1097 aa9.36□□□□□ -0.91
ALMS1-208ENST00000620466 NOSTRINQ8IVI9 506 aa9.36□□□□□ -0.91
ALMS1-208ENST00000620466 SMARCC2Q8TAQ2 1214 aa9.36□□□□□ -0.91
ALMS1-208ENST00000620466 BTG4Q9NY30 223 aa9.36□□□□□ -0.91
ALMS1-208ENST00000620466 SH3TC1Q8TE82 1336 aa9.36□□□□□ -0.91
ALMS1-208ENST00000620466 SASH1O94885 1247 aa9.36□□□□□ -0.91
ALMS1-208ENST00000620466 ADORA1P30542 326 aa9.36□□□□□ -0.91
ALMS1-208ENST00000620466 RBM6P78332 1123 aaKnown RBP9.36□□□□□ -0.91
ALMS1-208ENST00000620466 PUS3Q9BZE2 481 aaKnown RBP9.36□□□□□ -0.91
ALMS1-208ENST00000620466 SLTMQ9NWH9 1034 aaKnown RBP eCLIP9.36□□□□□ -0.91
ALMS1-208ENST00000620466 PPP2R2CQ9Y2T4 447 aa9.36□□□□□ -0.91
ALMS1-208ENST00000620466 REREQ9P2R6 1566 aa9.36□□□□□ -0.91
ALMS1-208ENST00000620466 ERVV-2B6SEH9 535 aa9.35□□□□□ -0.91
ALMS1-208ENST00000620466 CCDC172P0C7W6 258 aa9.35□□□□□ -0.91
ALMS1-208ENST00000620466 ERCC6LQ2NKX8 1250 aa9.35□□□□□ -0.91
ALMS1-208ENST00000620466 STAMQ92783 540 aa9.35□□□□□ -0.91
ALMS1-208ENST00000620466 MYO3AQ8NEV4 1616 aa9.35□□□□□ -0.91
ALMS1-208ENST00000620466 KRT13P13646 458 aa9.35□□□□□ -0.91
ALMS1-208ENST00000620466 DPH6Q7L8W6 267 aa9.35□□□□□ -0.91
ALMS1-208ENST00000620466 TMTC1Q8IUR5 882 aa9.35□□□□□ -0.91
ALMS1-208ENST00000620466 IFNL3Q8IZI9 196 aa9.35□□□□□ -0.91
ALMS1-208ENST00000620466 AATFQ9NY61 560 aaKnown RBP eCLIP9.35□□□□□ -0.91
ALMS1-208ENST00000620466 ABCA9Q8IUA7 1624 aa9.35□□□□□ -0.91
ALMS1-208ENST00000620466 TUBBP07437 444 aa9.35□□□□□ -0.91
ALMS1-208ENST00000620466 TBC1D8BQ0IIM8 1120 aa9.35□□□□□ -0.91
ALMS1-208ENST00000620466 FAM76AQ8TAV0 307 aa9.35□□□□□ -0.91
ALMS1-208ENST00000620466 KIAA1524Q8TCG1 905 aa9.35□□□□□ -0.91
ALMS1-208ENST00000620466 INO80Q9ULG1 1556 aaPredicted RBP9.35□□□□□ -0.91
ALMS1-208ENST00000620466 MAST3O60307 1309 aa9.35□□□□□ -0.91
ALMS1-208ENST00000620466 A0A1W2PQ27 194 aa9.35□□□□□ -0.91
ALMS1-208ENST00000620466 A0A1W2PQ64 194 aa9.35□□□□□ -0.91
ALMS1-208ENST00000620466 A0A1W2PQD8 194 aa9.35□□□□□ -0.91
ALMS1-208ENST00000620466 PARP10Q53GL7 1025 aa9.35□□□□□ -0.91
ALMS1-208ENST00000620466 DNAJC21Q5F1R6 531 aaKnown RBP9.35□□□□□ -0.91
ALMS1-208ENST00000620466 FAM212AQ96EL1 285 aa9.35□□□□□ -0.91
ALMS1-208ENST00000620466 WDR70Q9NW82 654 aa9.35□□□□□ -0.91
ALMS1-208ENST00000620466 RBM26Q5T8P6 1007 aaKnown RBP9.35□□□□□ -0.91
ALMS1-208ENST00000620466 AFAP1L1Q8TED9 768 aa9.35□□□□□ -0.91
ALMS1-208ENST00000620466 DESI2Q9BSY9 194 aa9.35□□□□□ -0.91
ALMS1-208ENST00000620466 FANCLQ9NW38 375 aa9.35□□□□□ -0.91
ALMS1-208ENST00000620466 IKBKGQ9Y6K9 419 aa9.35□□□□□ -0.91
ALMS1-208ENST00000620466 CSGALNACT2Q8N6G5 542 aa9.34□□□□□ -0.91
ALMS1-208ENST00000620466 PPP1R14CQ8TAE6 165 aa9.34□□□□□ -0.91
ALMS1-208ENST00000620466 SLF1Q9BQI6 1058 aa9.34□□□□□ -0.91
ALMS1-208ENST00000620466 ATP2C2O75185 946 aa9.34□□□□□ -0.91
ALMS1-208ENST00000620466 KIAA0753Q2KHM9 967 aa9.34□□□□□ -0.91
ALMS1-208ENST00000620466 TICAM2Q86XR7 235 aa9.34□□□□□ -0.91
ALMS1-208ENST00000620466 ZNF654Q8IZM8 581 aa9.34□□□□□ -0.91
ALMS1-208ENST00000620466 MICALL1Q8N3F8 863 aa9.34□□□□□ -0.91
ALMS1-208ENST00000620466 CACTINQ8WUQ7 758 aaKnown RBP9.34□□□□□ -0.91
ALMS1-208ENST00000620466 RIMBP2O15034 1052 aa9.34□□□□□ -0.91
ALMS1-208ENST00000620466 CIAO1O76071 339 aa9.34□□□□□ -0.91
ALMS1-208ENST00000620466 POLD1P28340 1107 aa9.34□□□□□ -0.91
ALMS1-208ENST00000620466 CNNM4Q6P4Q7 775 aa9.34□□□□□ -0.91
ALMS1-208ENST00000620466 ZNF827Q17R98 1081 aa9.34□□□□□ -0.91
ALMS1-208ENST00000620466 SREK1Q8WXA9 508 aaKnown RBP9.34□□□□□ -0.91
ALMS1-208ENST00000620466 A0A1W2PRG0 241 aa9.34□□□□□ -0.91
ALMS1-208ENST00000620466 HIBADHP31937 336 aaKnown RBP9.34□□□□□ -0.91
ALMS1-208ENST00000620466 ACTN2P35609 894 aa9.34□□□□□ -0.91
ALMS1-208ENST00000620466 GJC1P36383 396 aa9.34□□□□□ -0.91
ALMS1-208ENST00000620466 GOLGA8FQ08AF8 430 aa9.34□□□□□ -0.91
ALMS1-208ENST00000620466 GOLGA8DPQ0D2H9 430 aa9.34□□□□□ -0.91
ALMS1-208ENST00000620466 TOB2Q14106 344 aaPredicted RBP9.34□□□□□ -0.91
ALMS1-208ENST00000620466 DPCR1Q3MIW9 517 aa9.34□□□□□ -0.91
ALMS1-208ENST00000620466 C10orf67Q8IYJ2 551 aa9.34□□□□□ -0.91
ALMS1-208ENST00000620466 ZBTB38Q8NAP3 1195 aaPredicted RBP9.34□□□□□ -0.91
ALMS1-208ENST00000620466 GPR108Q9NPR9 543 aa9.34□□□□□ -0.91
ALMS1-208ENST00000620466 NRKQ7Z2Y5 1582 aa9.34□□□□□ -0.91
ALMS1-208ENST00000620466 PDE6AP16499 860 aa9.34□□□□□ -0.91
ALMS1-208ENST00000620466 PPP2R5BQ15173 497 aa9.34□□□□□ -0.91
ALMS1-208ENST00000620466 OGFOD1Q8N543 542 aa9.34□□□□□ -0.91
ALMS1-208ENST00000620466 GPR161Q8N6U8 529 aaKnown RBP9.34□□□□□ -0.91
ALMS1-208ENST00000620466 LMBR1Q8WVP7 490 aa9.34□□□□□ -0.91
ALMS1-208ENST00000620466 WWC3Q9ULE0 1092 aa9.34□□□□□ -0.91
ALMS1-208ENST00000620466 PPP1R2P41236 205 aa9.33□□□□□ -0.92
ALMS1-208ENST00000620466 SECISBP2LQ93073 1101 aaKnown RBP9.33□□□□□ -0.92
ALMS1-208ENST00000620466 TTC14Q96N46 770 aa9.33□□□□□ -0.92
ALMS1-208ENST00000620466 UBAP1LF5GYI3 381 aa9.33□□□□□ -0.92
ALMS1-208ENST00000620466 FAM47AQ5JRC9 791 aa9.33□□□□□ -0.92
ALMS1-208ENST00000620466 TPTE2Q6XPS3 522 aa9.33□□□□□ -0.92
ALMS1-208ENST00000620466 USP37Q86T82 979 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms