RNA–Protein interactions for RNA: ENST00000619555.4

TARDBP-221, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 682 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-221ENST00000619555 IRF5Q13568 498 aa13.63□□□□□ -0.23
TARDBP-221ENST00000619555 MTMR2Q13614 643 aa13.63□□□□□ -0.23
TARDBP-221ENST00000619555 UBE2Q1Q7Z7E8 422 aa13.63□□□□□ -0.23
TARDBP-221ENST00000619555 METTL16Q86W50 562 aaKnown RBP13.63□□□□□ -0.23
TARDBP-221ENST00000619555 CRACR2BQ8N4Y2 399 aaPredicted RBP13.63□□□□□ -0.23
TARDBP-221ENST00000619555 MIGA1Q8NAN2 632 aa13.63□□□□□ -0.23
TARDBP-221ENST00000619555 PXYLP1Q8TE99 480 aa13.63□□□□□ -0.23
TARDBP-221ENST00000619555 U2AF1L4Q8WU68 220 aaKnown RBP13.63□□□□□ -0.23
TARDBP-221ENST00000619555 DPF3Q92784 378 aa13.63□□□□□ -0.23
TARDBP-221ENST00000619555 COA7Q96BR5 231 aa13.63□□□□□ -0.23
TARDBP-221ENST00000619555 ANTXR1Q9H6X2 564 aa13.63□□□□□ -0.23
TARDBP-221ENST00000619555 COLQQ9Y215 455 aaPredicted RBP13.63□□□□□ -0.23
TARDBP-221ENST00000619555 PEX10O60683 326 aa13.62□□□□□ -0.23
TARDBP-221ENST00000619555 SGPL1O95470 568 aa13.62□□□□□ -0.23
TARDBP-221ENST00000619555 ASNSP08243 561 aa13.62□□□□□ -0.23
TARDBP-221ENST00000619555 BACE1P56817 501 aa13.62□□□□□ -0.23
TARDBP-221ENST00000619555 AACSQ86V21 672 aa13.62□□□□□ -0.23
TARDBP-221ENST00000619555 MAGEB6Q8N7X4 407 aa13.62□□□□□ -0.23
TARDBP-221ENST00000619555 TRIM34Q9BYJ4 488 aa13.62□□□□□ -0.23
TARDBP-221ENST00000619555 MYH1P12882 1939 aa13.61□□□□□ -0.23
TARDBP-221ENST00000619555 IGSF3O75054 1194 aa13.61□□□□□ -0.23
TARDBP-221ENST00000619555 DEFB118Q96PH6 123 aa13.61□□□□□ -0.23
TARDBP-221ENST00000619555 P2RX7Q99572 595 aaKnown RBP13.61□□□□□ -0.23
TARDBP-221ENST00000619555 IL1RAPL2Q9NP60 686 aa13.61□□□□□ -0.23
TARDBP-221ENST00000619555 TMOD4Q9NZQ9 345 aa13.61□□□□□ -0.23
TARDBP-221ENST00000619555 ZBTB21Q9ULJ3 1066 aa13.61□□□□□ -0.23
TARDBP-221ENST00000619555 USP17L10C9JJH3 530 aa13.6□□□□□ -0.23
TARDBP-221ENST00000619555 FARP2O94887 1054 aaPredicted RBP13.6□□□□□ -0.23
TARDBP-221ENST00000619555 HLA-DOAP06340 250 aa13.6□□□□□ -0.23
TARDBP-221ENST00000619555 HOXA7P31268 230 aaPredicted RBP13.6□□□□□ -0.23
TARDBP-221ENST00000619555 USP5P45974 858 aa13.6□□□□□ -0.23
TARDBP-221ENST00000619555 IRX3P78415 501 aaPredicted RBP13.6□□□□□ -0.23
TARDBP-221ENST00000619555 ERC1Q8IUD2 1116 aa13.6□□□□□ -0.23
TARDBP-221ENST00000619555 GJD2Q9UKL4 321 aa13.6□□□□□ -0.23
TARDBP-221ENST00000619555 RANBP2P49792 3224 aaKnown RBP13.59□□□□□ -0.23
TARDBP-221ENST00000619555 C19orf81C9J6K1 198 aa13.59□□□□□ -0.23
TARDBP-221ENST00000619555 APBB1O00213 710 aa13.59□□□□□ -0.23
TARDBP-221ENST00000619555 GH2P01242 217 aa13.59□□□□□ -0.23
TARDBP-221ENST00000619555 TFRCP02786 760 aaKnown RBP13.59□□□□□ -0.23
TARDBP-221ENST00000619555 FXR1P51114 621 aaKnown RBP eCLIP13.59□□□□□ -0.23
TARDBP-221ENST00000619555 MAP3K12Q12852 859 aa13.59□□□□□ -0.23
TARDBP-221ENST00000619555 RHPN1Q8TCX5 695 aa13.59□□□□□ -0.23
TARDBP-221ENST00000619555 TXNRD2Q9NNW7 524 aa13.59□□□□□ -0.23
TARDBP-221ENST00000619555 EMILIN3Q9NT22 766 aa13.59□□□□□ -0.23
TARDBP-221ENST00000619555 GINM1Q9NU53 330 aa13.59□□□□□ -0.23
TARDBP-221ENST00000619555 MORF4L1Q9UBU8 362 aa13.59□□□□□ -0.23
TARDBP-221ENST00000619555 HERVK_113P62684 666 aa13.58□□□□□ -0.24
TARDBP-221ENST00000619555 TRIM32Q13049 653 aa13.58□□□□□ -0.24
TARDBP-221ENST00000619555 CHRDL2Q6WN34 429 aa13.58□□□□□ -0.24
TARDBP-221ENST00000619555 HTATIP2Q9BUP3 242 aa13.58□□□□□ -0.24
TARDBP-221ENST00000619555 BCL11AQ9H165 835 aa13.58□□□□□ -0.24
TARDBP-221ENST00000619555 PAK6Q9NQU5 681 aaPredicted RBP13.58□□□□□ -0.24
TARDBP-221ENST00000619555 RBPJLQ9UBG7 517 aa13.58□□□□□ -0.24
TARDBP-221ENST00000619555 PLXNB2O15031 1838 aa13.57□□□□□ -0.24
TARDBP-221ENST00000619555 CYP2B6P20813 491 aa13.57□□□□□ -0.24
TARDBP-221ENST00000619555 Q3C1V9 767 aa13.57□□□□□ -0.24
TARDBP-221ENST00000619555 HSP90AB4PQ58FF6 505 aa13.57□□□□□ -0.24
TARDBP-221ENST00000619555 TATDN1Q6P1N9 297 aa13.57□□□□□ -0.24
TARDBP-221ENST00000619555 USP17L2Q6R6M4 530 aa13.57□□□□□ -0.24
TARDBP-221ENST00000619555 POTEEQ6S8J3 1075 aa13.57□□□□□ -0.24
TARDBP-221ENST00000619555 SIRT2Q8IXJ6 389 aa13.57□□□□□ -0.24
TARDBP-221ENST00000619555 GPRC5AQ8NFJ5 357 aa13.57□□□□□ -0.24
TARDBP-221ENST00000619555 RIOK1Q9BRS2 568 aaKnown RBP13.57□□□□□ -0.24
TARDBP-221ENST00000619555 CRISPLD2Q9H0B8 497 aa13.57□□□□□ -0.24
TARDBP-221ENST00000619555 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.57□□□□□ -0.24
TARDBP-221ENST00000619555 SERPINB13Q9UIV8 391 aa13.57□□□□□ -0.24
TARDBP-221ENST00000619555 COG6Q9Y2V7 657 aa13.57□□□□□ -0.24
TARDBP-221ENST00000619555 HMGCRP04035 888 aa13.56□□□□□ -0.24
TARDBP-221ENST00000619555 PLCD1P51178 756 aa13.56□□□□□ -0.24
TARDBP-221ENST00000619555 ZYXQ15942 572 aaKnown RBP13.56□□□□□ -0.24
TARDBP-221ENST00000619555 C20orf194Q5TEA3 1177 aa13.56□□□□□ -0.24
TARDBP-221ENST00000619555 TTC6Q86TZ1 520 aa13.56□□□□□ -0.24
TARDBP-221ENST00000619555 CERS3Q8IU89 383 aa13.56□□□□□ -0.24
TARDBP-221ENST00000619555 EHD4Q9H223 541 aa13.56□□□□□ -0.24
TARDBP-221ENST00000619555 SZT2Q5T011 3432 aa13.55□□□□□ -0.24
TARDBP-221ENST00000619555 MAGEB6P1A0A0J9YX57 407 aa13.55□□□□□ -0.24
TARDBP-221ENST00000619555 MS4A1P11836 297 aa13.55□□□□□ -0.24
TARDBP-221ENST00000619555 PDE6AP16499 860 aa13.55□□□□□ -0.24
TARDBP-221ENST00000619555 SHMT1P34896 483 aa13.55□□□□□ -0.24
TARDBP-221ENST00000619555 EVX2Q03828 476 aa13.55□□□□□ -0.24
TARDBP-221ENST00000619555 RAB3GAP1Q15042 981 aa13.55□□□□□ -0.24
TARDBP-221ENST00000619555 CERKLQ49MI3 558 aaPredicted RBP13.55□□□□□ -0.24
TARDBP-221ENST00000619555 SLC9C2Q5TAH2 1124 aa13.55□□□□□ -0.24
TARDBP-221ENST00000619555 RPAP2Q8IXW5 612 aaPredicted RBP13.55□□□□□ -0.24
TARDBP-221ENST00000619555 CLASRPQ8N2M8 674 aaKnown RBP13.55□□□□□ -0.24
TARDBP-221ENST00000619555 ACER1Q8TDN7 264 aa13.55□□□□□ -0.24
TARDBP-221ENST00000619555 DIS3LQ8TF46 1054 aaKnown RBP13.55□□□□□ -0.24
TARDBP-221ENST00000619555 TRIB2Q92519 343 aa13.55□□□□□ -0.24
TARDBP-221ENST00000619555 KIF1BPQ96EK5 621 aa13.55□□□□□ -0.24
TARDBP-221ENST00000619555 EDC3Q96F86 508 aaKnown RBP13.55□□□□□ -0.24
TARDBP-221ENST00000619555 PAWRQ96IZ0 340 aaKnown RBP13.55□□□□□ -0.24
TARDBP-221ENST00000619555 DNAJC2Q99543 621 aaKnown RBP13.55□□□□□ -0.24
TARDBP-221ENST00000619555 PAGR1Q9BTK6 254 aa13.55□□□□□ -0.24
TARDBP-221ENST00000619555 PORCNQ9H237 461 aa13.55□□□□□ -0.24
TARDBP-221ENST00000619555 ZBTB40Q9NUA8 1239 aa13.55□□□□□ -0.24
TARDBP-221ENST00000619555 RBM27Q9P2N5 1060 aaKnown RBP13.55□□□□□ -0.24
TARDBP-221ENST00000619555 GOLIM4O00461 696 aa13.54□□□□□ -0.24
TARDBP-221ENST00000619555 POLR3DP05423 398 aaPredicted RBP13.54□□□□□ -0.24
TARDBP-221ENST00000619555 IFIT2P09913 472 aaKnown RBP13.54□□□□□ -0.24
TARDBP-221ENST00000619555 GUCY1A2P33402 732 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms