RNA–Protein interactions for RNA: ENST00000618217.4

CBWD3-213, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene CBWD3, Length 1,611 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-213ENST00000618217 NKX2-3Q8TAU0 364 aa26.89■■□□□ 1.9
CBWD3-213ENST00000618217 MKNK2Q9HBH9 465 aa26.89■■□□□ 1.9
CBWD3-213ENST00000618217 ZNF287Q9HBT7 754 aa26.89■■□□□ 1.9
CBWD3-213ENST00000618217 NOL9Q5SY16 702 aaKnown RBP26.88■■□□□ 1.89
CBWD3-213ENST00000618217 MFSD6Q6ZSS7 791 aa26.88■■□□□ 1.89
CBWD3-213ENST00000618217 STOX1Q6ZVD7 989 aa26.88■■□□□ 1.89
CBWD3-213ENST00000618217 SAPCD2Q86UD0 394 aa26.88■■□□□ 1.89
CBWD3-213ENST00000618217 ANKRD13AQ8IZ07 590 aa26.88■■□□□ 1.89
CBWD3-213ENST00000618217 VGLL4Q14135 290 aa26.87■■□□□ 1.89
CBWD3-213ENST00000618217 CLMNQ96JQ2 1002 aa26.87■■□□□ 1.89
CBWD3-213ENST00000618217 CCDC17Q96LX7 622 aa26.87■■□□□ 1.89
CBWD3-213ENST00000618217 RNF41Q9H4P4 317 aaPredicted RBP26.87■■□□□ 1.89
CBWD3-213ENST00000618217 TLL2Q9Y6L7 1015 aa26.87■■□□□ 1.89
CBWD3-213ENST00000618217 GREB1LQ9C091 1923 aaPredicted RBP26.87■■□□□ 1.89
CBWD3-213ENST00000618217 NEDD4P46934 1319 aa26.87■■□□□ 1.89
CBWD3-213ENST00000618217 E7EWF7 191 aa26.87■■□□□ 1.89
CBWD3-213ENST00000618217 RNF20Q5VTR2 975 aa26.87■■□□□ 1.89
CBWD3-213ENST00000618217 SNCAIPQ9Y6H5 919 aa26.87■■□□□ 1.89
CBWD3-213ENST00000618217 GDF11O95390 407 aa26.86■■□□□ 1.89
CBWD3-213ENST00000618217 AKR1B1P15121 316 aa26.86■■□□□ 1.89
CBWD3-213ENST00000618217 SCYL3Q8IZE3 742 aa26.86■■□□□ 1.89
CBWD3-213ENST00000618217 GNL3Q9BVP2 549 aaKnown RBP eCLIP26.86■■□□□ 1.89
CBWD3-213ENST00000618217 GUCY1A2P33402 732 aa26.85■■□□□ 1.89
CBWD3-213ENST00000618217 HUNKP57058 714 aa26.85■■□□□ 1.89
CBWD3-213ENST00000618217 ABCB5Q2M3G0 1257 aa26.85■■□□□ 1.89
CBWD3-213ENST00000618217 CREBZFQ9NS37 354 aa26.85■■□□□ 1.89
CBWD3-213ENST00000618217 PHIPQ8WWQ0 1821 aa26.84■■□□□ 1.89
CBWD3-213ENST00000618217 C1QTNF8P60827 252 aa26.84■■□□□ 1.89
CBWD3-213ENST00000618217 ZNF444Q8N0Y2 327 aaPredicted RBP26.84■■□□□ 1.89
CBWD3-213ENST00000618217 GINM1Q9NU53 330 aa26.84■■□□□ 1.89
CBWD3-213ENST00000618217 ZBTB21Q9ULJ3 1066 aa26.84■■□□□ 1.89
CBWD3-213ENST00000618217 CSADQ9Y600 493 aa26.84■■□□□ 1.89
CBWD3-213ENST00000618217 GH2P01242 217 aa26.83■■□□□ 1.89
CBWD3-213ENST00000618217 FRMD4AQ9P2Q2 1039 aaPredicted RBP26.83■■□□□ 1.89
CBWD3-213ENST00000618217 SNX14Q9Y5W7 946 aa26.83■■□□□ 1.89
CBWD3-213ENST00000618217 ASNSP08243 561 aa26.83■■□□□ 1.88
CBWD3-213ENST00000618217 TFAP4Q01664 338 aa26.83■■□□□ 1.88
CBWD3-213ENST00000618217 FAM47AQ5JRC9 791 aa26.83■■□□□ 1.88
CBWD3-213ENST00000618217 CNNM2Q9H8M5 875 aa26.83■■□□□ 1.88
CBWD3-213ENST00000618217 B4E1Z4 1266 aa26.82■■□□□ 1.88
CBWD3-213ENST00000618217 ZKSCAN1P17029 563 aaPredicted RBP26.82■■□□□ 1.88
CBWD3-213ENST00000618217 COL9A3Q14050 684 aaPredicted RBP26.82■■□□□ 1.88
CBWD3-213ENST00000618217 RRP12Q5JTH9 1297 aaKnown RBP26.82■■□□□ 1.88
CBWD3-213ENST00000618217 NEDD1Q8NHV4 660 aa26.82■■□□□ 1.88
CBWD3-213ENST00000618217 KRT23Q9C075 422 aa26.82■■□□□ 1.88
CBWD3-213ENST00000618217 PLIN4Q96Q06 1357 aa26.82■■□□□ 1.88
CBWD3-213ENST00000618217 RANBP6O60518 1105 aaKnown RBP26.81■■□□□ 1.88
CBWD3-213ENST00000618217 PTPRAP18433 802 aa26.81■■□□□ 1.88
CBWD3-213ENST00000618217 NT5C2P49902 561 aa26.81■■□□□ 1.88
CBWD3-213ENST00000618217 ADCK5Q3MIX3 580 aa26.81■■□□□ 1.88
CBWD3-213ENST00000618217 TMEM179Q6ZVK1 233 aa26.81■■□□□ 1.88
CBWD3-213ENST00000618217 HHIPL1Q96JK4 782 aa26.81■■□□□ 1.88
CBWD3-213ENST00000618217 ELP3Q9H9T3 547 aa26.81■■□□□ 1.88
CBWD3-213ENST00000618217 TOMM22Q9NS69 142 aa26.81■■□□□ 1.88
CBWD3-213ENST00000618217 ABT1Q9ULW3 272 aaKnown RBP26.81■■□□□ 1.88
CBWD3-213ENST00000618217 IGKV6D-41A0A0C4DH26 115 aa26.8■■□□□ 1.88
CBWD3-213ENST00000618217 KDM4AO75164 1064 aa26.8■■□□□ 1.88
CBWD3-213ENST00000618217 SEPT2Q15019 361 aa26.8■■□□□ 1.88
CBWD3-213ENST00000618217 ESR2Q92731 530 aa26.8■■□□□ 1.88
CBWD3-213ENST00000618217 SLC10A4Q96EP9 437 aa26.8■■□□□ 1.88
CBWD3-213ENST00000618217 CABP5Q9NP86 173 aa26.8■■□□□ 1.88
CBWD3-213ENST00000618217 ZSWIM5Q9P217 1185 aa26.8■■□□□ 1.88
CBWD3-213ENST00000618217 MCCP23508 829 aa26.79■■□□□ 1.88
CBWD3-213ENST00000618217 NCOA7Q8NI08 942 aa26.79■■□□□ 1.88
CBWD3-213ENST00000618217 CNKSR2Q8WXI2 1034 aa26.79■■□□□ 1.88
CBWD3-213ENST00000618217 IL17RAQ96F46 866 aa26.79■■□□□ 1.88
CBWD3-213ENST00000618217 PICK1Q9NRD5 415 aa26.79■■□□□ 1.88
CBWD3-213ENST00000618217 SPDYE5A6NIY4 337 aa26.79■■□□□ 1.88
CBWD3-213ENST00000618217 MPHOSPH10O00566 681 aaKnown RBP26.79■■□□□ 1.88
CBWD3-213ENST00000618217 TSPY3P0CV98 308 aa26.79■■□□□ 1.88
CBWD3-213ENST00000618217 TSPY8P0CW00 308 aa26.79■■□□□ 1.88
CBWD3-213ENST00000618217 TRDNQ13061 729 aa26.79■■□□□ 1.88
CBWD3-213ENST00000618217 KRT32Q14532 448 aa26.79■■□□□ 1.88
CBWD3-213ENST00000618217 CCDC84Q86UT8 332 aaPredicted RBP26.79■■□□□ 1.88
CBWD3-213ENST00000618217 ERO1BQ86YB8 467 aa26.79■■□□□ 1.88
CBWD3-213ENST00000618217 SIAH1Q8IUQ4 282 aa26.79■■□□□ 1.88
CBWD3-213ENST00000618217 MB21D2Q8IYB1 491 aaPredicted RBP26.79■■□□□ 1.88
CBWD3-213ENST00000618217 IL17RBQ9NRM6 502 aa26.79■■□□□ 1.88
CBWD3-213ENST00000618217 TSPY2A6NKD2 308 aa26.78■■□□□ 1.88
CBWD3-213ENST00000618217 RGMBQ6NW40 437 aa26.78■■□□□ 1.88
CBWD3-213ENST00000618217 USP17L5A8MUK1 530 aa26.77■■□□□ 1.88
CBWD3-213ENST00000618217 GJA5P36382 358 aa26.77■■□□□ 1.88
CBWD3-213ENST00000618217 RAB3GAP1Q15042 981 aa26.77■■□□□ 1.88
CBWD3-213ENST00000618217 CYB5R4Q7L1T6 521 aa26.77■■□□□ 1.88
CBWD3-213ENST00000618217 TCP11L1Q9NUJ3 509 aa26.77■■□□□ 1.88
CBWD3-213ENST00000618217 RASSF10A6NK89 507 aa26.76■■□□□ 1.87
CBWD3-213ENST00000618217 NOVP48745 357 aa26.76■■□□□ 1.87
CBWD3-213ENST00000618217 ANAPC15P60006 121 aa26.76■■□□□ 1.87
CBWD3-213ENST00000618217 PPATQ06203 517 aa26.76■■□□□ 1.87
CBWD3-213ENST00000618217 CLEC10AQ8IUN9 316 aa26.76■■□□□ 1.87
CBWD3-213ENST00000618217 KANSL2Q9H9L4 492 aa26.76■■□□□ 1.87
CBWD3-213ENST00000618217 ZHX2Q9Y6X8 837 aa26.76■■□□□ 1.87
CBWD3-213ENST00000618217 NMT2O60551 498 aa26.76■■□□□ 1.87
CBWD3-213ENST00000618217 HSPA6P17066 643 aa26.76■■□□□ 1.87
CBWD3-213ENST00000618217 RALYLQ86SE5 291 aaKnown RBP26.76■■□□□ 1.87
CBWD3-213ENST00000618217 OPTNQ96CV9 577 aa26.76■■□□□ 1.87
CBWD3-213ENST00000618217 CEP95Q96GE4 821 aa26.76■■□□□ 1.87
CBWD3-213ENST00000618217 NEK1Q96PY6 1258 aa26.76■■□□□ 1.87
CBWD3-213ENST00000618217 WDR18Q9BV38 432 aa26.76■■□□□ 1.87
CBWD3-213ENST00000618217 C22orf23Q9BZE7 217 aa26.76■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms