RNA–Protein interactions for RNA: ENST00000617998.4

POLR2A-209, Transcript of RNA polymerase II subunit A, humanhuman

TSL 1 (best)

Gene POLR2A, Length 6,751 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2A-209ENST00000617998 ZBTB12Q9Y330 459 aaPredicted RBP12.37□□□□□ -0.43
POLR2A-209ENST00000617998 MANSC4A6NHS7 340 aaPredicted RBP12.37□□□□□ -0.43
POLR2A-209ENST00000617998 PDIA4P13667 645 aaKnown RBP12.37□□□□□ -0.43
POLR2A-209ENST00000617998 LETM2Q2VYF4 491 aa12.37□□□□□ -0.43
POLR2A-209ENST00000617998 FAM47AQ5JRC9 791 aa12.37□□□□□ -0.43
POLR2A-209ENST00000617998 ADCY9O60503 1353 aa12.37□□□□□ -0.43
POLR2A-209ENST00000617998 KRT19P08727 400 aa12.37□□□□□ -0.43
POLR2A-209ENST00000617998 NCAPH2Q6IBW4 605 aa12.37□□□□□ -0.43
POLR2A-209ENST00000617998 GTF3C2Q8WUA4 911 aaPredicted RBP12.37□□□□□ -0.43
POLR2A-209ENST00000617998 JPH2Q9BR39 696 aaPredicted RBP12.37□□□□□ -0.43
POLR2A-209ENST00000617998 IBTKQ9P2D0 1353 aaPredicted RBP12.37□□□□□ -0.43
POLR2A-209ENST00000617998 NOGQ13253 232 aa12.37□□□□□ -0.43
POLR2A-209ENST00000617998 JAKMIP3Q5VZ66 844 aa12.37□□□□□ -0.43
POLR2A-209ENST00000617998 EXOC8Q8IYI6 725 aa12.37□□□□□ -0.43
POLR2A-209ENST00000617998 ARRDC4Q8NCT1 418 aa12.37□□□□□ -0.43
POLR2A-209ENST00000617998 ARID3AQ99856 593 aa12.37□□□□□ -0.43
POLR2A-209ENST00000617998 ATP11BQ9Y2G3 1177 aa12.37□□□□□ -0.43
POLR2A-209ENST00000617998 LMAN1P49257 510 aa12.36□□□□□ -0.43
POLR2A-209ENST00000617998 PRR5LQ6MZQ0 368 aa12.36□□□□□ -0.43
POLR2A-209ENST00000617998 SAMD7Q7Z3H4 446 aa12.36□□□□□ -0.43
POLR2A-209ENST00000617998 LINC00116Q8NCU8 138 aa12.36□□□□□ -0.43
POLR2A-209ENST00000617998 FRMPD2Q68DX3 1309 aaPredicted RBP12.36□□□□□ -0.43
POLR2A-209ENST00000617998 CCDC102BQ68D86 513 aa12.36□□□□□ -0.43
POLR2A-209ENST00000617998 ALS2CR12Q96Q35 445 aa12.36□□□□□ -0.43
POLR2A-209ENST00000617998 ARHGEF40Q8TER5 1519 aa12.36□□□□□ -0.43
POLR2A-209ENST00000617998 CCND2P30279 289 aa12.36□□□□□ -0.43
POLR2A-209ENST00000617998 TFDP1Q14186 410 aa12.36□□□□□ -0.43
POLR2A-209ENST00000617998 USP19O94966 1318 aa12.36□□□□□ -0.43
POLR2A-209ENST00000617998 ARHGAP31Q2M1Z3 1444 aa12.36□□□□□ -0.43
POLR2A-209ENST00000617998 GAS7O60861 476 aa12.36□□□□□ -0.43
POLR2A-209ENST00000617998 HAUS3Q68CZ6 603 aa12.36□□□□□ -0.43
POLR2A-209ENST00000617998 MED10Q9BTT4 135 aa12.36□□□□□ -0.43
POLR2A-209ENST00000617998 CYP19A1P11511 503 aaPredicted RBP12.36□□□□□ -0.43
POLR2A-209ENST00000617998 SSTR3P32745 418 aaPredicted RBP12.36□□□□□ -0.43
POLR2A-209ENST00000617998 KRT2P35908 639 aa12.36□□□□□ -0.43
POLR2A-209ENST00000617998 WDR33Q9C0J8 1336 aaKnown RBP12.36□□□□□ -0.43
POLR2A-209ENST00000617998 MED14O60244 1454 aa12.36□□□□□ -0.43
POLR2A-209ENST00000617998 PSMD14O00487 310 aa12.35□□□□□ -0.43
POLR2A-209ENST00000617998 STAT6P42226 847 aa12.35□□□□□ -0.43
POLR2A-209ENST00000617998 SEPT7Q16181 437 aaKnown RBP12.35□□□□□ -0.43
POLR2A-209ENST00000617998 G2E3Q7L622 706 aa12.35□□□□□ -0.43
POLR2A-209ENST00000617998 LDHDQ86WU2 507 aa12.35□□□□□ -0.43
POLR2A-209ENST00000617998 TSPYL6Q8N831 410 aa12.35□□□□□ -0.43
POLR2A-209ENST00000617998 SH2B1Q9NRF2 756 aaPredicted RBP12.35□□□□□ -0.43
POLR2A-209ENST00000617998 KIF24Q5T7B8 1368 aa12.35□□□□□ -0.43
POLR2A-209ENST00000617998 ATF7P17544 494 aaPredicted RBP12.35□□□□□ -0.43
POLR2A-209ENST00000617998 RBM25P49756 843 aaKnown RBP12.35□□□□□ -0.43
POLR2A-209ENST00000617998 RASA3Q14644 834 aa12.35□□□□□ -0.43
POLR2A-209ENST00000617998 GBP3Q9H0R5 595 aa12.35□□□□□ -0.43
POLR2A-209ENST00000617998 SETD1BQ9UPS6 1966 aaKnown RBP12.35□□□□□ -0.43
POLR2A-209ENST00000617998 MADDQ8WXG6 1647 aa12.35□□□□□ -0.43
POLR2A-209ENST00000617998 GPAA1O43292 621 aa12.35□□□□□ -0.43
POLR2A-209ENST00000617998 EVI5O60447 810 aa12.35□□□□□ -0.43
POLR2A-209ENST00000617998 PRPF6O94906 941 aaKnown RBP12.35□□□□□ -0.43
POLR2A-209ENST00000617998 CDR1P51861 262 aa12.35□□□□□ -0.43
POLR2A-209ENST00000617998 RSBN1LQ6PCB5 846 aaPredicted RBP12.35□□□□□ -0.43
POLR2A-209ENST00000617998 UPF3BQ9BZI7 483 aaKnown RBP12.35□□□□□ -0.43
POLR2A-209ENST00000617998 ADGRL2O95490 1459 aa12.35□□□□□ -0.43
POLR2A-209ENST00000617998 XPOTO43592 962 aaKnown RBP12.35□□□□□ -0.43
POLR2A-209ENST00000617998 PRAMEF18Q5VWM3 479 aa12.35□□□□□ -0.43
POLR2A-209ENST00000617998 RBM46Q8TBY0 533 aaKnown RBP12.35□□□□□ -0.43
POLR2A-209ENST00000617998 LRRC2Q9BYS8 371 aa12.35□□□□□ -0.43
POLR2A-209ENST00000617998 RNF208Q9H0X6 261 aa12.35□□□□□ -0.43
POLR2A-209ENST00000617998 HELLSQ9NRZ9 838 aa12.35□□□□□ -0.43
POLR2A-209ENST00000617998 FKTNO75072 461 aa12.35□□□□□ -0.43
POLR2A-209ENST00000617998 PDE8BO95263 885 aa12.35□□□□□ -0.43
POLR2A-209ENST00000617998 GPSM2P81274 684 aa12.35□□□□□ -0.43
POLR2A-209ENST00000617998 METTL23Q86XA0 190 aa12.35□□□□□ -0.43
POLR2A-209ENST00000617998 OTUD6BQ8N6M0 293 aa12.35□□□□□ -0.43
POLR2A-209ENST00000617998 RIOK1Q9BRS2 568 aaKnown RBP12.35□□□□□ -0.43
POLR2A-209ENST00000617998 MTIF2P46199 727 aaKnown RBP12.35□□□□□ -0.43
POLR2A-209ENST00000617998 STAT2P52630 851 aa12.35□□□□□ -0.43
POLR2A-209ENST00000617998 CCT6AP40227 531 aaKnown RBP12.34□□□□□ -0.43
POLR2A-209ENST00000617998 CTCFP49711 727 aaPredicted RBP12.34□□□□□ -0.43
POLR2A-209ENST00000617998 FAM117BQ6P1L5 589 aa12.34□□□□□ -0.43
POLR2A-209ENST00000617998 CTNNBL1Q8WYA6 563 aaPredicted RBP12.34□□□□□ -0.43
POLR2A-209ENST00000617998 TBC1D5Q92609 795 aa12.34□□□□□ -0.43
POLR2A-209ENST00000617998 BRF1Q92994 677 aa12.34□□□□□ -0.43
POLR2A-209ENST00000617998 ARHGEF37A1IGU5 675 aa12.34□□□□□ -0.43
POLR2A-209ENST00000617998 WDR44Q5JSH3 913 aa12.34□□□□□ -0.43
POLR2A-209ENST00000617998 FAM160B2Q86V87 743 aa12.34□□□□□ -0.43
POLR2A-209ENST00000617998 NLRP7Q8WX94 980 aa12.34□□□□□ -0.43
POLR2A-209ENST00000617998 CDHR1Q96JP9 859 aa12.34□□□□□ -0.43
POLR2A-209ENST00000617998 MYOZ2Q9NPC6 264 aa12.34□□□□□ -0.43
POLR2A-209ENST00000617998 PLXNC1O60486 1568 aa12.34□□□□□ -0.43
POLR2A-209ENST00000617998 USP17L15C9J2P7 530 aa12.34□□□□□ -0.43
POLR2A-209ENST00000617998 USP17L13C9JLJ4 530 aa12.34□□□□□ -0.43
POLR2A-209ENST00000617998 USP17L11C9JVI0 530 aa12.34□□□□□ -0.43
POLR2A-209ENST00000617998 USP17L18D6R9N7 530 aa12.34□□□□□ -0.43
POLR2A-209ENST00000617998 USP17L22D6RA61 530 aa12.34□□□□□ -0.43
POLR2A-209ENST00000617998 USP17L17D6RBQ6 530 aa12.34□□□□□ -0.43
POLR2A-209ENST00000617998 USP17L19D6RCP7 530 aa12.34□□□□□ -0.43
POLR2A-209ENST00000617998 USP17L20D6RJB6 530 aa12.34□□□□□ -0.43
POLR2A-209ENST00000617998 C6orf222P0C671 652 aaPredicted RBP12.34□□□□□ -0.43
POLR2A-209ENST00000617998 BMP3P12645 472 aa12.34□□□□□ -0.43
POLR2A-209ENST00000617998 USP17L24Q0WX57 530 aa12.34□□□□□ -0.43
POLR2A-209ENST00000617998 IFRD2Q12894 506 aaPredicted RBP12.34□□□□□ -0.43
POLR2A-209ENST00000617998 NMIQ13287 307 aaPredicted RBP12.34□□□□□ -0.43
POLR2A-209ENST00000617998 PLEKHG2Q9H7P9 1386 aa12.34□□□□□ -0.43
POLR2A-209ENST00000617998 B4E1Z4 1266 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms