RNA–Protein interactions for RNA: ENST00000617904.4

TRAPPC3-210, Transcript of trafficking protein particle complex 3, humanhuman

TSL 2 BASIC

Gene TRAPPC3, Length 1,305 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-210ENST00000617904 USP17L12C9JPN9 530 aa19.66■□□□□ 0.74
TRAPPC3-210ENST00000617904 USP17L21D6R901 530 aa19.66■□□□□ 0.74
TRAPPC3-210ENST00000617904 IFIT3O14879 490 aaKnown RBP19.66■□□□□ 0.74
TRAPPC3-210ENST00000617904 PFKFB2O60825 505 aa19.66■□□□□ 0.74
TRAPPC3-210ENST00000617904 CDKL5O76039 1030 aa19.66■□□□□ 0.74
TRAPPC3-210ENST00000617904 POLR3DP05423 398 aaPredicted RBP19.66■□□□□ 0.74
TRAPPC3-210ENST00000617904 ZNF157P51786 506 aaPredicted RBP19.66■□□□□ 0.74
TRAPPC3-210ENST00000617904 KIF23Q02241 960 aaPredicted RBP19.66■□□□□ 0.74
TRAPPC3-210ENST00000617904 CTDSPL2Q05D32 466 aa19.66■□□□□ 0.74
TRAPPC3-210ENST00000617904 DIXDC1Q155Q3 683 aa19.66■□□□□ 0.74
TRAPPC3-210ENST00000617904 NFKBIBQ15653 356 aa19.66■□□□□ 0.74
TRAPPC3-210ENST00000617904 TMEM67Q5HYA8 995 aa19.66■□□□□ 0.74
TRAPPC3-210ENST00000617904 ZNF384Q8TF68 577 aa19.66■□□□□ 0.74
TRAPPC3-210ENST00000617904 ZNF646O15015 1829 aaPredicted RBP19.66■□□□□ 0.74
TRAPPC3-210ENST00000617904 CPLX1O14810 134 aa19.65■□□□□ 0.74
TRAPPC3-210ENST00000617904 KDM4AO75164 1064 aa19.65■□□□□ 0.74
TRAPPC3-210ENST00000617904 SLC10A3P09131 477 aa19.65■□□□□ 0.74
TRAPPC3-210ENST00000617904 LIFRP42702 1097 aa19.65■□□□□ 0.74
TRAPPC3-210ENST00000617904 EVCP57679 992 aa19.65■□□□□ 0.74
TRAPPC3-210ENST00000617904 STK3Q13188 491 aa19.65■□□□□ 0.74
TRAPPC3-210ENST00000617904 DACT2Q5SW24 774 aa19.65■□□□□ 0.74
TRAPPC3-210ENST00000617904 CTR9Q6PD62 1173 aa19.65■□□□□ 0.74
TRAPPC3-210ENST00000617904 MXD3Q9BW11 206 aa19.65■□□□□ 0.74
TRAPPC3-210ENST00000617904 MCOLN1Q9GZU1 580 aa19.65■□□□□ 0.74
TRAPPC3-210ENST00000617904 HDAC9Q9UKV0 1011 aa19.65■□□□□ 0.74
TRAPPC3-210ENST00000617904 PITPNM2Q9BZ72 1349 aa19.65■□□□□ 0.74
TRAPPC3-210ENST00000617904 CCDC85CA6NKD9 419 aa19.64■□□□□ 0.73
TRAPPC3-210ENST00000617904 APOBRQ0VD83 1088 aa19.64■□□□□ 0.73
TRAPPC3-210ENST00000617904 NBR1Q14596 966 aa19.64■□□□□ 0.73
TRAPPC3-210ENST00000617904 WTAPQ15007 396 aa19.64■□□□□ 0.73
TRAPPC3-210ENST00000617904 TTC6Q86TZ1 520 aa19.64■□□□□ 0.73
TRAPPC3-210ENST00000617904 SH3RF3Q8TEJ3 882 aaPredicted RBP19.64■□□□□ 0.73
TRAPPC3-210ENST00000617904 LARP6Q9BRS8 491 aaKnown RBP19.64■□□□□ 0.73
TRAPPC3-210ENST00000617904 TAOK2Q9UL54 1235 aa19.64■□□□□ 0.73
TRAPPC3-210ENST00000617904 KLF18A0A0U1RQI7 1052 aa19.63■□□□□ 0.73
TRAPPC3-210ENST00000617904 CCDC196A0A1B0GTZ2 297 aa19.63■□□□□ 0.73
TRAPPC3-210ENST00000617904 ORC4O43929 436 aa19.63■□□□□ 0.73
TRAPPC3-210ENST00000617904 GJB2P29033 226 aa19.63■□□□□ 0.73
TRAPPC3-210ENST00000617904 MMP14P50281 582 aa19.63■□□□□ 0.73
TRAPPC3-210ENST00000617904 PPP2R5BQ15173 497 aa19.63■□□□□ 0.73
TRAPPC3-210ENST00000617904 TGFBRAP1Q8WUH2 860 aa19.63■□□□□ 0.73
TRAPPC3-210ENST00000617904 LRRC2Q9BYS8 371 aa19.63■□□□□ 0.73
TRAPPC3-210ENST00000617904 MKNK2Q9HBH9 465 aa19.63■□□□□ 0.73
TRAPPC3-210ENST00000617904 SCAF8Q9UPN6 1271 aaKnown RBP19.63■□□□□ 0.73
TRAPPC3-210ENST00000617904 SLC12A7Q9Y666 1083 aa19.63■□□□□ 0.73
TRAPPC3-210ENST00000617904 NEDD4P46934 1319 aa19.62■□□□□ 0.73
TRAPPC3-210ENST00000617904 GOLGA8BA8MQT2 603 aa19.62■□□□□ 0.73
TRAPPC3-210ENST00000617904 F8W031 263 aaPredicted RBP19.62■□□□□ 0.73
TRAPPC3-210ENST00000617904 SH2B2O14492 632 aaPredicted RBP19.62■□□□□ 0.73
TRAPPC3-210ENST00000617904 RANBP6O60518 1105 aaKnown RBP19.62■□□□□ 0.73
TRAPPC3-210ENST00000617904 RCAN1P53805 252 aa19.62■□□□□ 0.73
TRAPPC3-210ENST00000617904 NBPF9Q3BBW0 867 aa19.62■□□□□ 0.73
TRAPPC3-210ENST00000617904 CHST3Q7LGC8 479 aa19.62■□□□□ 0.73
TRAPPC3-210ENST00000617904 NECAB1Q8N987 351 aa19.62■□□□□ 0.73
TRAPPC3-210ENST00000617904 TNPO1Q92973 898 aaKnown RBP19.62■□□□□ 0.73
TRAPPC3-210ENST00000617904 NBPF3Q9H094 633 aa19.62■□□□□ 0.73
TRAPPC3-210ENST00000617904 SAGE1Q9NXZ1 904 aa19.62■□□□□ 0.73
TRAPPC3-210ENST00000617904 ZSWIM5Q9P217 1185 aa19.62■□□□□ 0.73
TRAPPC3-210ENST00000617904 SERPINA10Q9UK55 444 aa19.62■□□□□ 0.73
TRAPPC3-210ENST00000617904 DAGLAQ9Y4D2 1042 aa19.62■□□□□ 0.73
TRAPPC3-210ENST00000617904 PDIA3P30101 505 aaKnown RBP19.61■□□□□ 0.73
TRAPPC3-210ENST00000617904 RBM5P52756 815 aaKnown RBP eCLIP19.61■□□□□ 0.73
TRAPPC3-210ENST00000617904 FKBP1BP68106 108 aa19.61■□□□□ 0.73
TRAPPC3-210ENST00000617904 C12orf60Q5U649 245 aa19.61■□□□□ 0.73
TRAPPC3-210ENST00000617904 LARP1BQ659C4 914 aaKnown RBP19.61■□□□□ 0.73
TRAPPC3-210ENST00000617904 SGMS1Q86VZ5 419 aa19.61■□□□□ 0.73
TRAPPC3-210ENST00000617904 RASAL3Q86YV0 1011 aa19.61■□□□□ 0.73
TRAPPC3-210ENST00000617904 ZNF444Q8N0Y2 327 aaPredicted RBP19.61■□□□□ 0.73
TRAPPC3-210ENST00000617904 OGFOD1Q8N543 542 aa19.61■□□□□ 0.73
TRAPPC3-210ENST00000617904 CSRNP1Q96S65 589 aa19.61■□□□□ 0.73
TRAPPC3-210ENST00000617904 RNF186Q9NXI6 227 aa19.61■□□□□ 0.73
TRAPPC3-210ENST00000617904 MYH2Q9UKX2 1941 aa19.6■□□□□ 0.73
TRAPPC3-210ENST00000617904 PAPPA2Q9BXP8 1791 aa19.6■□□□□ 0.73
TRAPPC3-210ENST00000617904 ZBTB43O43298 467 aa19.6■□□□□ 0.73
TRAPPC3-210ENST00000617904 STX6O43752 255 aa19.6■□□□□ 0.73
TRAPPC3-210ENST00000617904 LARGE1O95461 756 aa19.6■□□□□ 0.73
TRAPPC3-210ENST00000617904 HLA-DOAP06340 250 aa19.6■□□□□ 0.73
TRAPPC3-210ENST00000617904 FGRP09769 529 aa19.6■□□□□ 0.73
TRAPPC3-210ENST00000617904 CALM1P0DP23 149 aa19.6■□□□□ 0.73
TRAPPC3-210ENST00000617904 CALM2P0DP24 149 aa19.6■□□□□ 0.73
TRAPPC3-210ENST00000617904 CALM3P0DP25 149 aa19.6■□□□□ 0.73
TRAPPC3-210ENST00000617904 CRKP46108 304 aa19.6■□□□□ 0.73
TRAPPC3-210ENST00000617904 RGS19P49795 217 aa19.6■□□□□ 0.73
TRAPPC3-210ENST00000617904 DGKZQ13574 1117 aa19.6■□□□□ 0.73
TRAPPC3-210ENST00000617904 CSPP1Q1MSJ5 1256 aa19.6■□□□□ 0.73
TRAPPC3-210ENST00000617904 ZDHHC15Q96MV8 337 aa19.6■□□□□ 0.73
TRAPPC3-210ENST00000617904 USP40Q9NVE5 1235 aa19.6■□□□□ 0.73
TRAPPC3-210ENST00000617904 TMOD2Q9NZR1 351 aa19.6■□□□□ 0.73
TRAPPC3-210ENST00000617904 TSPY2A6NKD2 308 aa19.59■□□□□ 0.73
TRAPPC3-210ENST00000617904 WNT10BO00744 389 aa19.59■□□□□ 0.73
TRAPPC3-210ENST00000617904 TRPA1O75762 1119 aa19.59■□□□□ 0.73
TRAPPC3-210ENST00000617904 METAP2P50579 478 aaKnown RBP eCLIP19.59■□□□□ 0.73
TRAPPC3-210ENST00000617904 ANTXR2P58335 489 aa19.59■□□□□ 0.73
TRAPPC3-210ENST00000617904 PPP4R3BQ5MIZ7 849 aa19.59■□□□□ 0.73
TRAPPC3-210ENST00000617904 PRAMEF18Q5VWM3 479 aa19.59■□□□□ 0.73
TRAPPC3-210ENST00000617904 MOB2Q70IA6 237 aa19.59■□□□□ 0.73
TRAPPC3-210ENST00000617904 CYB5R4Q7L1T6 521 aa19.59■□□□□ 0.73
TRAPPC3-210ENST00000617904 MAPKAPK5Q8IW41 473 aa19.59■□□□□ 0.73
TRAPPC3-210ENST00000617904 ROBO3Q96MS0 1386 aa19.59■□□□□ 0.73
TRAPPC3-210ENST00000617904 H3BQV1 296 aa19.58■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms