RNA–Protein interactions for RNA: ENST00000617489.1

MALAT1-210, metastasis associated lung adenocarcinoma transcript 1, humanhuman

TSL 2 BASIC

Gene MALAT1, Length 318 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MALAT1-210ENST00000617489 PRDM10Q9NQV6 1147 aa6.6□□□□□ -1.35
MALAT1-210ENST00000617489 NLRP2Q9NX02 1062 aa6.6□□□□□ -1.35
MALAT1-210ENST00000617489 CTNND2Q9UQB3 1225 aa6.6□□□□□ -1.35
MALAT1-210ENST00000617489 AKAP2Q9Y2D5 859 aa6.6□□□□□ -1.35
MALAT1-210ENST00000617489 CSADQ9Y600 493 aa6.6□□□□□ -1.35
MALAT1-210ENST00000617489 MTUS2Q5JR59 1369 aa6.59□□□□□ -1.35
MALAT1-210ENST00000617489 PHLDB1Q86UU1 1377 aa6.59□□□□□ -1.35
MALAT1-210ENST00000617489 HECW1Q76N89 1606 aa6.59□□□□□ -1.35
MALAT1-210ENST00000617489 SERPINB4P48594 390 aa6.59□□□□□ -1.35
MALAT1-210ENST00000617489 ERVK-24P63145 666 aa6.59□□□□□ -1.35
MALAT1-210ENST00000617489 ZC3H12AQ5D1E8 599 aaKnown RBP6.59□□□□□ -1.35
MALAT1-210ENST00000617489 TMEM67Q5HYA8 995 aa6.59□□□□□ -1.35
MALAT1-210ENST00000617489 FYB2Q5VWT5 728 aa6.59□□□□□ -1.35
MALAT1-210ENST00000617489 B4GALNT3Q6L9W6 998 aa6.59□□□□□ -1.35
MALAT1-210ENST00000617489 PDZD3Q86UT5 571 aa6.59□□□□□ -1.35
MALAT1-210ENST00000617489 LRRC56Q8IYG6 542 aaPredicted RBP6.59□□□□□ -1.35
MALAT1-210ENST00000617489 EMILIN2Q9BXX0 1053 aa6.59□□□□□ -1.35
MALAT1-210ENST00000617489 EPRSP07814 1512 aaKnown RBP6.59□□□□□ -1.35
MALAT1-210ENST00000617489 NUP153P49790 1475 aaKnown RBP6.59□□□□□ -1.36
MALAT1-210ENST00000617489 CCDC18Q5T9S5 1454 aa6.59□□□□□ -1.36
MALAT1-210ENST00000617489 TEX14Q8IWB6 1497 aa6.59□□□□□ -1.36
MALAT1-210ENST00000617489 TSPOAP1O95153 1857 aa6.58□□□□□ -1.36
MALAT1-210ENST00000617489 IGF2BP3O00425 579 aaKnown RBP eCLIP6.58□□□□□ -1.36
MALAT1-210ENST00000617489 ARHGAP4P98171 946 aa6.58□□□□□ -1.36
MALAT1-210ENST00000617489 PPM1JQ5JR12 505 aa6.58□□□□□ -1.36
MALAT1-210ENST00000617489 PRR23BQ6ZRT6 265 aa6.58□□□□□ -1.36
MALAT1-210ENST00000617489 CDC37L1Q7L3B6 337 aa6.58□□□□□ -1.36
MALAT1-210ENST00000617489 CYFIP1Q7L576 1253 aa6.58□□□□□ -1.36
MALAT1-210ENST00000617489 SPACA3Q8IXA5 215 aa6.58□□□□□ -1.36
MALAT1-210ENST00000617489 GPBAR1Q8TDU6 330 aa6.58□□□□□ -1.36
MALAT1-210ENST00000617489 KIRREL1Q96J84 757 aa6.58□□□□□ -1.36
MALAT1-210ENST00000617489 CSRNP1Q96S65 589 aa6.58□□□□□ -1.36
MALAT1-210ENST00000617489 GLI2P10070 1586 aa6.57□□□□□ -1.36
MALAT1-210ENST00000617489 TSPAN15O95858 294 aa6.57□□□□□ -1.36
MALAT1-210ENST00000617489 GLI1P08151 1106 aa6.57□□□□□ -1.36
MALAT1-210ENST00000617489 ZSCAN22P10073 491 aaPredicted RBP6.57□□□□□ -1.36
MALAT1-210ENST00000617489 XRCC5P13010 732 aaKnown RBP6.57□□□□□ -1.36
MALAT1-210ENST00000617489 ECM1Q16610 540 aa6.57□□□□□ -1.36
MALAT1-210ENST00000617489 LILRA6Q6PI73 481 aa6.57□□□□□ -1.36
MALAT1-210ENST00000617489 FAM214BQ7L5A3 538 aa6.57□□□□□ -1.36
MALAT1-210ENST00000617489 STK35Q8TDR2 534 aa6.57□□□□□ -1.36
MALAT1-210ENST00000617489 CFDP1Q9UEE9 299 aaPredicted RBP6.57□□□□□ -1.36
MALAT1-210ENST00000617489 FYCO1Q9BQS8 1478 aa6.57□□□□□ -1.36
MALAT1-210ENST00000617489 NFIBO00712 420 aa6.56□□□□□ -1.36
MALAT1-210ENST00000617489 GPR182O15218 404 aa6.56□□□□□ -1.36
MALAT1-210ENST00000617489 NME2P22392 152 aa6.56□□□□□ -1.36
MALAT1-210ENST00000617489 NKPD1Q17RQ9 610 aa6.56□□□□□ -1.36
MALAT1-210ENST00000617489 LMCD1Q9NZU5 365 aa6.56□□□□□ -1.36
MALAT1-210ENST00000617489 TROQ12816 1431 aaPredicted RBP6.56□□□□□ -1.36
MALAT1-210ENST00000617489 VPS8Q8N3P4 1428 aa6.56□□□□□ -1.36
MALAT1-210ENST00000617489 DIP2BQ9P265 1576 aa6.56□□□□□ -1.36
MALAT1-210ENST00000617489 KIF13AQ9H1H9 1805 aa6.55□□□□□ -1.36
MALAT1-210ENST00000617489 DCDC2CA8MYV0 355 aa6.55□□□□□ -1.36
MALAT1-210ENST00000617489 FAM155AB1AL88 458 aaPredicted RBP6.55□□□□□ -1.36
MALAT1-210ENST00000617489 CLCN7P51798 805 aa6.55□□□□□ -1.36
MALAT1-210ENST00000617489 C12orf40Q86WS4 652 aa6.55□□□□□ -1.36
MALAT1-210ENST00000617489 BCO2Q9BYV7 579 aa6.55□□□□□ -1.36
MALAT1-210ENST00000617489 FOXQ1Q9C009 403 aa6.55□□□□□ -1.36
MALAT1-210ENST00000617489 CARS2Q9HA77 564 aaKnown RBP6.55□□□□□ -1.36
MALAT1-210ENST00000617489 PRDM5Q9NQX1 630 aaPredicted RBP6.55□□□□□ -1.36
MALAT1-210ENST00000617489 CCNB3Q8WWL7 1395 aa6.55□□□□□ -1.36
MALAT1-210ENST00000617489 CDK13Q14004 1512 aaKnown RBP6.55□□□□□ -1.36
MALAT1-210ENST00000617489 PITPNM2Q9BZ72 1349 aa6.54□□□□□ -1.36
MALAT1-210ENST00000617489 PLCH2O75038 1416 aa6.54□□□□□ -1.36
MALAT1-210ENST00000617489 IQCJ-SCHIP1C9J366 451 aaPredicted RBP6.54□□□□□ -1.36
MALAT1-210ENST00000617489 C1QTNF9P0C862 333 aa6.54□□□□□ -1.36
MALAT1-210ENST00000617489 TSPY4P0CV99 314 aa6.54□□□□□ -1.36
MALAT1-210ENST00000617489 TSPY10P0CW01 314 aa6.54□□□□□ -1.36
MALAT1-210ENST00000617489 LCNL1Q6ZST4 164 aa6.54□□□□□ -1.36
MALAT1-210ENST00000617489 CILP2Q8IUL8 1156 aa6.54□□□□□ -1.36
MALAT1-210ENST00000617489 SIAH1Q8IUQ4 282 aa6.54□□□□□ -1.36
MALAT1-210ENST00000617489 DIRC2Q96SL1 478 aa6.54□□□□□ -1.36
MALAT1-210ENST00000617489 CFAP43Q8NDM7 1665 aa6.54□□□□□ -1.36
MALAT1-210ENST00000617489 MAGI3Q5TCQ9 1506 aa6.54□□□□□ -1.36
MALAT1-210ENST00000617489 KRTAP9-7A8MTY7 169 aa6.53□□□□□ -1.36
MALAT1-210ENST00000617489 RAPGEF3O95398 923 aa6.53□□□□□ -1.36
MALAT1-210ENST00000617489 TMEM253P0C7T8 217 aa6.53□□□□□ -1.36
MALAT1-210ENST00000617489 CDKAL1Q5VV42 579 aa6.53□□□□□ -1.36
MALAT1-210ENST00000617489 PI16Q6UXB8 463 aa6.53□□□□□ -1.36
MALAT1-210ENST00000617489 MPRIPQ6WCQ1 1025 aa6.53□□□□□ -1.36
MALAT1-210ENST00000617489 FBXO15Q8NCQ5 510 aaPredicted RBP6.53□□□□□ -1.36
MALAT1-210ENST00000617489 CCER1Q8TC90 406 aaPredicted RBP6.53□□□□□ -1.36
MALAT1-210ENST00000617489 DMRTB1Q96MA1 342 aa6.53□□□□□ -1.36
MALAT1-210ENST00000617489 HSPA12BQ96MM6 686 aa6.53□□□□□ -1.36
MALAT1-210ENST00000617489 NSUN3Q9H649 340 aaKnown RBP6.53□□□□□ -1.36
MALAT1-210ENST00000617489 TPX2Q9ULW0 747 aaKnown RBP6.53□□□□□ -1.36
MALAT1-210ENST00000617489 SAMM50Q9Y512 469 aa6.53□□□□□ -1.36
MALAT1-210ENST00000617489 AKNAQ7Z591 1439 aa6.52□□□□□ -1.37
MALAT1-210ENST00000617489 FANCGO15287 622 aa6.52□□□□□ -1.37
MALAT1-210ENST00000617489 EOMESO95936 686 aa6.52□□□□□ -1.37
MALAT1-210ENST00000617489 HNRNPMP52272 730 aaKnown RBP eCLIP6.52□□□□□ -1.37
MALAT1-210ENST00000617489 C1QL4Q86Z23 238 aa6.52□□□□□ -1.37
MALAT1-210ENST00000617489 NPAS4Q8IUM7 802 aa6.52□□□□□ -1.37
MALAT1-210ENST00000617489 KCT2Q8NC54 265 aa6.52□□□□□ -1.37
MALAT1-210ENST00000617489 KRTAP4-11Q9BYQ6 195 aa6.52□□□□□ -1.37
MALAT1-210ENST00000617489 ATP13A1Q9HD20 1204 aa6.52□□□□□ -1.37
MALAT1-210ENST00000617489 ARID4BQ4LE39 1312 aaPredicted RBP6.51□□□□□ -1.37
MALAT1-210ENST00000617489 KIF14Q15058 1648 aa6.51□□□□□ -1.37
MALAT1-210ENST00000617489 MAP3K4Q9Y6R4 1608 aa6.51□□□□□ -1.37
MALAT1-210ENST00000617489 GDNFP39905 211 aa6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms