RNA–Protein interactions for RNA: ENST00000617422.4

CNTNAP3B-212, Transcript of contactin associated protein like 3B, humanhuman

TSL 2 BASIC

Gene CNTNAP3B, Length 2,170 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3B-212ENST00000617422 TPRNQ4KMQ1 711 aa24.02■■□□□ 1.44
CNTNAP3B-212ENST00000617422 HHIPL2Q6UWX4 724 aa24.02■■□□□ 1.44
CNTNAP3B-212ENST00000617422 NBPF11Q86T75 865 aa24.02■■□□□ 1.44
CNTNAP3B-212ENST00000617422 USP17L3A6NCW0 530 aa24.01■■□□□ 1.43
CNTNAP3B-212ENST00000617422 USP17L4A6NCW7 530 aa24.01■■□□□ 1.43
CNTNAP3B-212ENST00000617422 IFNAR1P17181 557 aa24.01■■□□□ 1.43
CNTNAP3B-212ENST00000617422 GUCY1A2P33402 732 aa24.01■■□□□ 1.43
CNTNAP3B-212ENST00000617422 ZNF445P59923 1031 aa24.01■■□□□ 1.43
CNTNAP3B-212ENST00000617422 KRT85P78386 507 aa24.01■■□□□ 1.43
CNTNAP3B-212ENST00000617422 TROAPQ12815 778 aa24.01■■□□□ 1.43
CNTNAP3B-212ENST00000617422 PICALMQ13492 652 aa24.01■■□□□ 1.43
CNTNAP3B-212ENST00000617422 R3HDM1Q15032 1099 aaKnown RBP24.01■■□□□ 1.43
CNTNAP3B-212ENST00000617422 CDC42EP5Q6NZY7 148 aa24.01■■□□□ 1.43
CNTNAP3B-212ENST00000617422 USP17L1Q7RTZ2 530 aa24.01■■□□□ 1.43
CNTNAP3B-212ENST00000617422 ZSCAN16Q9H4T2 348 aaPredicted RBP24.01■■□□□ 1.43
CNTNAP3B-212ENST00000617422 CDKL5O76039 1030 aa24.01■■□□□ 1.43
CNTNAP3B-212ENST00000617422 RASA1P20936 1047 aa24.01■■□□□ 1.43
CNTNAP3B-212ENST00000617422 CRKP46108 304 aa24.01■■□□□ 1.43
CNTNAP3B-212ENST00000617422 RCAN1P53805 252 aa24.01■■□□□ 1.43
CNTNAP3B-212ENST00000617422 CCDC93Q567U6 631 aa24.01■■□□□ 1.43
CNTNAP3B-212ENST00000617422 CCDC82Q8N4S0 544 aa24.01■■□□□ 1.43
CNTNAP3B-212ENST00000617422 TEKT1Q969V4 418 aa24.01■■□□□ 1.43
CNTNAP3B-212ENST00000617422 PPP1R9BQ96SB3 815 aa24.01■■□□□ 1.43
CNTNAP3B-212ENST00000617422 USP40Q9NVE5 1235 aa24.01■■□□□ 1.43
CNTNAP3B-212ENST00000617422 IARSP41252 1262 aaKnown RBP24■■□□□ 1.43
CNTNAP3B-212ENST00000617422 NASPP49321 788 aaPredicted RBP24■■□□□ 1.43
CNTNAP3B-212ENST00000617422 ALG1Q9BT22 464 aa24■■□□□ 1.43
CNTNAP3B-212ENST00000617422 SLC26A6Q9BXS9 759 aa24■■□□□ 1.43
CNTNAP3B-212ENST00000617422 FTOQ9C0B1 505 aaKnown RBP eCLIP24■■□□□ 1.43
CNTNAP3B-212ENST00000617422 UTRNP46939 3433 aa23.99■■□□□ 1.43
CNTNAP3B-212ENST00000617422 FKBP1AP62942 108 aaKnown RBP23.99■■□□□ 1.43
CNTNAP3B-212ENST00000617422 SUPT20HQ8NEM7 779 aa23.99■■□□□ 1.43
CNTNAP3B-212ENST00000617422 NAP1L5Q96NT1 182 aaPredicted RBP23.99■■□□□ 1.43
CNTNAP3B-212ENST00000617422 MTFR1LQ9H019 292 aa23.99■■□□□ 1.43
CNTNAP3B-212ENST00000617422 MKNK2Q9HBH9 465 aa23.99■■□□□ 1.43
CNTNAP3B-212ENST00000617422 FMNL1O95466 1100 aaPredicted RBP23.99■■□□□ 1.43
CNTNAP3B-212ENST00000617422 MBD3O95983 291 aa23.99■■□□□ 1.43
CNTNAP3B-212ENST00000617422 CDK8P49336 464 aa23.99■■□□□ 1.43
CNTNAP3B-212ENST00000617422 CPLX2Q6PUV4 134 aaKnown RBP23.99■■□□□ 1.43
CNTNAP3B-212ENST00000617422 C16orf86Q6ZW13 317 aa23.99■■□□□ 1.43
CNTNAP3B-212ENST00000617422 AMOTL1Q8IY63 956 aa23.99■■□□□ 1.43
CNTNAP3B-212ENST00000617422 ZNF277Q9NRM2 450 aaPredicted RBP23.99■■□□□ 1.43
CNTNAP3B-212ENST00000617422 TAOK2Q9UL54 1235 aa23.99■■□□□ 1.43
CNTNAP3B-212ENST00000617422 PSME4Q14997 1843 aa23.98■■□□□ 1.43
CNTNAP3B-212ENST00000617422 KIF28PB7ZC32 967 aa23.98■■□□□ 1.43
CNTNAP3B-212ENST00000617422 NFIAQ12857 509 aa23.98■■□□□ 1.43
CNTNAP3B-212ENST00000617422 ZSCAN23Q3MJ62 389 aa23.98■■□□□ 1.43
CNTNAP3B-212ENST00000617422 PSMD1Q99460 953 aa23.98■■□□□ 1.43
CNTNAP3B-212ENST00000617422 FUT2Q10981 343 aa23.98■■□□□ 1.43
CNTNAP3B-212ENST00000617422 RTKN2Q8IZC4 609 aa23.98■■□□□ 1.43
CNTNAP3B-212ENST00000617422 CRACR2BQ8N4Y2 399 aaPredicted RBP23.98■■□□□ 1.43
CNTNAP3B-212ENST00000617422 ZDHHC15Q96MV8 337 aa23.98■■□□□ 1.43
CNTNAP3B-212ENST00000617422 STK36Q9NRP7 1315 aa23.97■■□□□ 1.43
CNTNAP3B-212ENST00000617422 BRCA1P38398 1863 aaKnown RBP23.97■■□□□ 1.43
CNTNAP3B-212ENST00000617422 UBE2HP62256 183 aa23.97■■□□□ 1.43
CNTNAP3B-212ENST00000617422 CATIPQ7Z7H3 387 aa23.97■■□□□ 1.43
CNTNAP3B-212ENST00000617422 LEO1Q8WVC0 666 aaPredicted RBP23.97■■□□□ 1.43
CNTNAP3B-212ENST00000617422 PLEKHA8P1O95397 391 aa23.96■■□□□ 1.43
CNTNAP3B-212ENST00000617422 PRKCSHP14314 528 aaPredicted RBP23.96■■□□□ 1.43
CNTNAP3B-212ENST00000617422 SSRP1Q08945 709 aaKnown RBP23.96■■□□□ 1.43
CNTNAP3B-212ENST00000617422 CACNB3P54284 484 aa23.96■■□□□ 1.43
CNTNAP3B-212ENST00000617422 ZFPM1Q8IX07 1006 aa23.96■■□□□ 1.43
CNTNAP3B-212ENST00000617422 KRT40Q6A162 431 aa23.95■■□□□ 1.42
CNTNAP3B-212ENST00000617422 SGIP1Q9BQI5 828 aa23.95■■□□□ 1.42
CNTNAP3B-212ENST00000617422 ELP1O95163 1332 aa23.95■■□□□ 1.42
CNTNAP3B-212ENST00000617422 MYH6P13533 1939 aa23.95■■□□□ 1.42
CNTNAP3B-212ENST00000617422 SLURP2P0DP57 97 aa23.95■■□□□ 1.42
CNTNAP3B-212ENST00000617422 TGFB2P61812 414 aa23.95■■□□□ 1.42
CNTNAP3B-212ENST00000617422 KIF23Q02241 960 aaPredicted RBP23.95■■□□□ 1.42
CNTNAP3B-212ENST00000617422 CEBPZQ03701 1054 aaKnown RBP23.95■■□□□ 1.42
CNTNAP3B-212ENST00000617422 ZNF444Q8N0Y2 327 aaPredicted RBP23.95■■□□□ 1.42
CNTNAP3B-212ENST00000617422 SPATA32Q96LK8 384 aa23.95■■□□□ 1.42
CNTNAP3B-212ENST00000617422 USP28Q96RU2 1077 aa23.95■■□□□ 1.42
CNTNAP3B-212ENST00000617422 MRIQ9BWK5 157 aa23.95■■□□□ 1.42
CNTNAP3B-212ENST00000617422 CCDC196A0A1B0GTZ2 297 aa23.94■■□□□ 1.42
CNTNAP3B-212ENST00000617422 DDAH1O94760 285 aa23.94■■□□□ 1.42
CNTNAP3B-212ENST00000617422 TSPY3P0CV98 308 aa23.94■■□□□ 1.42
CNTNAP3B-212ENST00000617422 TSPY8P0CW00 308 aa23.94■■□□□ 1.42
CNTNAP3B-212ENST00000617422 GABPAQ06546 454 aa23.94■■□□□ 1.42
CNTNAP3B-212ENST00000617422 SHISA4Q96DD7 197 aa23.94■■□□□ 1.42
CNTNAP3B-212ENST00000617422 SCAND2PQ9GZW5 306 aaPredicted RBP23.94■■□□□ 1.42
CNTNAP3B-212ENST00000617422 PIM2Q9P1W9 311 aa23.94■■□□□ 1.42
CNTNAP3B-212ENST00000617422 GRIPAP1Q4V328 841 aa23.93■■□□□ 1.42
CNTNAP3B-212ENST00000617422 ANKS1AQ92625 1134 aa23.93■■□□□ 1.42
CNTNAP3B-212ENST00000617422 UPF1Q92900 1129 aaKnown RBP eCLIP23.93■■□□□ 1.42
CNTNAP3B-212ENST00000617422 OSBPL5Q9H0X9 879 aaPredicted RBP23.93■■□□□ 1.42
CNTNAP3B-212ENST00000617422 POLD1P28340 1107 aa23.93■■□□□ 1.42
CNTNAP3B-212ENST00000617422 DGKHQ86XP1 1220 aa23.93■■□□□ 1.42
CNTNAP3B-212ENST00000617422 PGBD1Q96JS3 809 aa23.93■■□□□ 1.42
CNTNAP3B-212ENST00000617422 TCP11L1Q9NUJ3 509 aa23.93■■□□□ 1.42
CNTNAP3B-212ENST00000617422 BAZ2BQ9UIF8 2168 aaKnown RBP23.93■■□□□ 1.42
CNTNAP3B-212ENST00000617422 hCG_1642624A0A1W2PR95 340 aa23.92■■□□□ 1.42
CNTNAP3B-212ENST00000617422 PSDA5PKW4 1024 aaPredicted RBP23.92■■□□□ 1.42
CNTNAP3B-212ENST00000617422 RAD17O75943 681 aa23.92■■□□□ 1.42
CNTNAP3B-212ENST00000617422 HDLBPQ00341 1268 aaKnown RBP23.92■■□□□ 1.42
CNTNAP3B-212ENST00000617422 LARGE2Q8N3Y3 721 aa23.92■■□□□ 1.42
CNTNAP3B-212ENST00000617422 PPP1R1BQ9UD71 204 aaPredicted RBP23.92■■□□□ 1.42
CNTNAP3B-212ENST00000617422 SIPA1L1O43166 1804 aa23.92■■□□□ 1.42
CNTNAP3B-212ENST00000617422 RBM5P52756 815 aaKnown RBP eCLIP23.92■■□□□ 1.42
CNTNAP3B-212ENST00000617422 CSPP1Q1MSJ5 1256 aa23.92■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms