RNA–Protein interactions for RNA: ENST00000616325.1

PCDHA11-202, Transcript of protocadherin alpha 11, humanhuman

APPRIS ALT2 BASIC

Gene PCDHA11, Length 3,418 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA11-202ENST00000616325 RAD9BQ6WBX8 426 aa15.19■□□□□ 0.02
PCDHA11-202ENST00000616325 USP49Q70CQ1 688 aa15.19■□□□□ 0.02
PCDHA11-202ENST00000616325 BRAPQ7Z569 592 aa15.19■□□□□ 0.02
PCDHA11-202ENST00000616325 FOXP4Q8IVH2 680 aaPredicted RBP15.19■□□□□ 0.02
PCDHA11-202ENST00000616325 APPBP2Q92624 585 aa15.19■□□□□ 0.02
PCDHA11-202ENST00000616325 EEF2KMTQ96G04 330 aa15.19■□□□□ 0.02
PCDHA11-202ENST00000616325 JPH2Q9BR39 696 aaPredicted RBP15.19■□□□□ 0.02
PCDHA11-202ENST00000616325 PRDM11Q9NQV5 511 aa15.19■□□□□ 0.02
PCDHA11-202ENST00000616325 MAPK8IP1Q9UQF2 711 aa15.19■□□□□ 0.02
PCDHA11-202ENST00000616325 SALL1Q9NSC2 1324 aa15.19■□□□□ 0.02
PCDHA11-202ENST00000616325 PALLDQ8WX93 1383 aa15.19■□□□□ 0.02
PCDHA11-202ENST00000616325 H7C1W4 665 aa15.19■□□□□ 0.02
PCDHA11-202ENST00000616325 LTN1O94822 1766 aa15.19■□□□□ 0.02
PCDHA11-202ENST00000616325 MCAMP43121 646 aa15.19■□□□□ 0.02
PCDHA11-202ENST00000616325 SLC39A14Q15043 492 aa15.19■□□□□ 0.02
PCDHA11-202ENST00000616325 NAPBQ9H115 298 aa15.19■□□□□ 0.02
PCDHA11-202ENST00000616325 SERTAD1Q9UHV2 236 aa15.19■□□□□ 0.02
PCDHA11-202ENST00000616325 ZNF532Q9HCE3 1301 aa15.18■□□□□ 0.02
PCDHA11-202ENST00000616325 TDO2P48775 406 aa15.18■□□□□ 0.02
PCDHA11-202ENST00000616325 FMR1Q06787 632 aaKnown RBP eCLIP15.18■□□□□ 0.02
PCDHA11-202ENST00000616325 RBL2Q08999 1139 aa15.18■□□□□ 0.02
PCDHA11-202ENST00000616325 SAFBQ15424 915 aaKnown RBP eCLIP15.18■□□□□ 0.02
PCDHA11-202ENST00000616325 METTL16Q86W50 562 aaKnown RBP15.18■□□□□ 0.02
PCDHA11-202ENST00000616325 EFCAB13Q8IY85 973 aa15.18■□□□□ 0.02
PCDHA11-202ENST00000616325 MB21D2Q8IYB1 491 aaPredicted RBP15.18■□□□□ 0.02
PCDHA11-202ENST00000616325 CAGE1Q8TC20 777 aa15.18■□□□□ 0.02
PCDHA11-202ENST00000616325 GBP3Q9H0R5 595 aa15.18■□□□□ 0.02
PCDHA11-202ENST00000616325 WWC3Q9ULE0 1092 aa15.18■□□□□ 0.02
PCDHA11-202ENST00000616325 FOXP2O15409 715 aa15.18■□□□□ 0.02
PCDHA11-202ENST00000616325 ECM2O94769 699 aaPredicted RBP15.18■□□□□ 0.02
PCDHA11-202ENST00000616325 CCT6AP40227 531 aaKnown RBP15.18■□□□□ 0.02
PCDHA11-202ENST00000616325 CCDC148Q8NFR7 591 aa15.18■□□□□ 0.02
PCDHA11-202ENST00000616325 BCAS4Q8TDM0 211 aa15.18■□□□□ 0.02
PCDHA11-202ENST00000616325 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.18■□□□□ 0.02
PCDHA11-202ENST00000616325 ARMT1Q9H993 441 aa15.18■□□□□ 0.02
PCDHA11-202ENST00000616325 A0A087WUV0 522 aaPredicted RBP15.18■□□□□ 0.02
PCDHA11-202ENST00000616325 POTEB2H3BUK9 544 aa15.18■□□□□ 0.02
PCDHA11-202ENST00000616325 SRGAP2O75044 1071 aa15.18■□□□□ 0.02
PCDHA11-202ENST00000616325 CASP7P55210 303 aa15.18■□□□□ 0.02
PCDHA11-202ENST00000616325 SETQ01105 290 aaPredicted RBP15.18■□□□□ 0.02
PCDHA11-202ENST00000616325 APOA5Q6Q788 366 aa15.18■□□□□ 0.02
PCDHA11-202ENST00000616325 FCHSD1Q86WN1 690 aa15.18■□□□□ 0.02
PCDHA11-202ENST00000616325 IQUBQ8NA54 791 aa15.18■□□□□ 0.02
PCDHA11-202ENST00000616325 SLF1Q9BQI6 1058 aa15.18■□□□□ 0.02
PCDHA11-202ENST00000616325 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.18■□□□□ 0.02
PCDHA11-202ENST00000616325 GREM2Q9H772 168 aa15.18■□□□□ 0.02
PCDHA11-202ENST00000616325 PRKAB2O43741 272 aa15.17■□□□□ 0.02
PCDHA11-202ENST00000616325 PHKA1P46020 1223 aa15.17■□□□□ 0.02
PCDHA11-202ENST00000616325 DIS3L2Q8IYB7 885 aaKnown RBP15.17■□□□□ 0.02
PCDHA11-202ENST00000616325 FAM107BQ9H098 131 aa15.17■□□□□ 0.02
PCDHA11-202ENST00000616325 CABP5Q9NP86 173 aa15.17■□□□□ 0.02
PCDHA11-202ENST00000616325 BAZ2BQ9UIF8 2168 aaKnown RBP15.17■□□□□ 0.02
PCDHA11-202ENST00000616325 ITGA6P23229 1130 aa15.17■□□□□ 0.02
PCDHA11-202ENST00000616325 MATR3P43243 847 aaKnown RBP eCLIP15.17■□□□□ 0.02
PCDHA11-202ENST00000616325 ATP2B2Q01814 1243 aa15.17■□□□□ 0.02
PCDHA11-202ENST00000616325 LRP10Q7Z4F1 713 aa15.17■□□□□ 0.02
PCDHA11-202ENST00000616325 C19orf44Q9H6X5 657 aa15.17■□□□□ 0.02
PCDHA11-202ENST00000616325 HDAC6Q9UBN7 1215 aa15.17■□□□□ 0.02
PCDHA11-202ENST00000616325 ABCF2Q9UG63 623 aa15.17■□□□□ 0.02
PCDHA11-202ENST00000616325 ADGRL3Q9HAR2 1447 aa15.17■□□□□ 0.02
PCDHA11-202ENST00000616325 HEG1Q9ULI3 1381 aa15.17■□□□□ 0.02
PCDHA11-202ENST00000616325 NEDD4P46934 1319 aa15.17■□□□□ 0.02
PCDHA11-202ENST00000616325 ZEB2O60315 1214 aa15.17■□□□□ 0.02
PCDHA11-202ENST00000616325 SSRP1Q08945 709 aaKnown RBP15.17■□□□□ 0.02
PCDHA11-202ENST00000616325 MAGEB6Q8N7X4 407 aa15.17■□□□□ 0.02
PCDHA11-202ENST00000616325 TFR2Q9UP52 801 aa15.17■□□□□ 0.02
PCDHA11-202ENST00000616325 TBC1D2BQ9UPU7 963 aa15.17■□□□□ 0.02
PCDHA11-202ENST00000616325 ADGRG1Q9Y653 693 aa15.17■□□□□ 0.02
PCDHA11-202ENST00000616325 PRDM1O75626 825 aa15.16■□□□□ 0.02
PCDHA11-202ENST00000616325 PIH1D3Q9NQM4 214 aaKnown RBP15.16■□□□□ 0.02
PCDHA11-202ENST00000616325 CAPN7Q9Y6W3 813 aa15.16■□□□□ 0.02
PCDHA11-202ENST00000616325 FAM169AQ9Y6X4 670 aa15.16■□□□□ 0.02
PCDHA11-202ENST00000616325 EXOC5O00471 708 aa15.16■□□□□ 0.02
PCDHA11-202ENST00000616325 CASP14P31944 242 aa15.16■□□□□ 0.02
PCDHA11-202ENST00000616325 STIM1Q13586 685 aa15.16■□□□□ 0.02
PCDHA11-202ENST00000616325 NAPGQ99747 312 aaPredicted RBP15.16■□□□□ 0.02
PCDHA11-202ENST00000616325 FAM205CA6NFA0 338 aa15.15■□□□□ 0.02
PCDHA11-202ENST00000616325 MBD4O95243 580 aa15.15■□□□□ 0.02
PCDHA11-202ENST00000616325 CDC25AP30304 524 aa15.15■□□□□ 0.02
PCDHA11-202ENST00000616325 INPP5BP32019 993 aa15.15■□□□□ 0.02
PCDHA11-202ENST00000616325 GGCXP38435 758 aa15.15■□□□□ 0.02
PCDHA11-202ENST00000616325 PPP1R3FQ6ZSY5 799 aaPredicted RBP15.15■□□□□ 0.02
PCDHA11-202ENST00000616325 KAT2BQ92831 832 aa15.15■□□□□ 0.02
PCDHA11-202ENST00000616325 NUP88Q99567 741 aaPredicted RBP15.15■□□□□ 0.02
PCDHA11-202ENST00000616325 TRMT112Q9UI30 125 aaKnown RBP15.15■□□□□ 0.02
PCDHA11-202ENST00000616325 PCDHB6Q9Y5E3 794 aa15.15■□□□□ 0.02
PCDHA11-202ENST00000616325 BMP6P22004 513 aa15.15■□□□□ 0.02
PCDHA11-202ENST00000616325 HNRNPH1P31943 449 aaKnown RBP15.15■□□□□ 0.02
PCDHA11-202ENST00000616325 ATP6V1AP38606 617 aa15.15■□□□□ 0.02
PCDHA11-202ENST00000616325 RNF187Q5TA31 235 aaPredicted RBP15.15■□□□□ 0.02
PCDHA11-202ENST00000616325 KIF6Q6ZMV9 814 aa15.15■□□□□ 0.02
PCDHA11-202ENST00000616325 DNAJC10Q8IXB1 793 aa15.15■□□□□ 0.02
PCDHA11-202ENST00000616325 TRIM10Q9UDY6 481 aa15.15■□□□□ 0.02
PCDHA11-202ENST00000616325 RANBP6O60518 1105 aaKnown RBP15.15■□□□□ 0.02
PCDHA11-202ENST00000616325 CDKL5O76039 1030 aa15.15■□□□□ 0.02
PCDHA11-202ENST00000616325 EVA1CP58658 441 aa15.15■□□□□ 0.02
PCDHA11-202ENST00000616325 FAM76AQ8TAV0 307 aa15.15■□□□□ 0.02
PCDHA11-202ENST00000616325 AGXT2Q9BYV1 514 aa15.15■□□□□ 0.02
PCDHA11-202ENST00000616325 MEGF6O75095 1541 aa15.14■□□□□ 0.01
PCDHA11-202ENST00000616325 SMIM22K7EJ46 135 aa15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms