RNA–Protein interactions for RNA: ENST00000614721.1

ACSM3-215, Transcript of acyl-CoA synthetase medium chain family member 3, humanhuman

TSL 1 (best)

Gene ACSM3, Length 3,311 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACSM3-215ENST00000614721 OGFOD1Q8N543 542 aa10.07□□□□□ -0.8
ACSM3-215ENST00000614721 IL17RBQ9NRM6 502 aa10.07□□□□□ -0.8
ACSM3-215ENST00000614721 FAM217BQ9NTX9 383 aaPredicted RBP10.07□□□□□ -0.8
ACSM3-215ENST00000614721 VPS54Q9P1Q0 977 aa10.07□□□□□ -0.8
ACSM3-215ENST00000614721 SYCE3A1L190 88 aa10.07□□□□□ -0.8
ACSM3-215ENST00000614721 DDTLA6NHG4 134 aaPredicted RBP10.07□□□□□ -0.8
ACSM3-215ENST00000614721 AKAP17AQ02040 695 aaKnown RBP10.07□□□□□ -0.8
ACSM3-215ENST00000614721 ARHGAP27Q6ZUM4 889 aa10.07□□□□□ -0.8
ACSM3-215ENST00000614721 CCDC84Q86UT8 332 aaPredicted RBP10.07□□□□□ -0.8
ACSM3-215ENST00000614721 SLF2Q8IX21 1173 aa10.07□□□□□ -0.8
ACSM3-215ENST00000614721 NIM1KQ8IY84 436 aa10.07□□□□□ -0.8
ACSM3-215ENST00000614721 SLC16A10Q8TF71 515 aa10.07□□□□□ -0.8
ACSM3-215ENST00000614721 SPATA32Q96LK8 384 aa10.07□□□□□ -0.8
ACSM3-215ENST00000614721 KAT14Q9H8E8 782 aa10.07□□□□□ -0.8
ACSM3-215ENST00000614721 FZD1Q9UP38 647 aa10.07□□□□□ -0.8
ACSM3-215ENST00000614721 STRIP1Q5VSL9 837 aa10.07□□□□□ -0.8
ACSM3-215ENST00000614721 USP17L2Q6R6M4 530 aa10.07□□□□□ -0.8
ACSM3-215ENST00000614721 C15orf52Q6ZUT6 534 aaKnown RBP10.07□□□□□ -0.8
ACSM3-215ENST00000614721 TTC6Q86TZ1 520 aa10.07□□□□□ -0.8
ACSM3-215ENST00000614721 TRIM34Q9BYJ4 488 aa10.07□□□□□ -0.8
ACSM3-215ENST00000614721 UBA5Q9GZZ9 404 aa10.07□□□□□ -0.8
ACSM3-215ENST00000614721 TAOK3Q9H2K8 898 aa10.07□□□□□ -0.8
ACSM3-215ENST00000614721 FRMPD2Q68DX3 1309 aaPredicted RBP10.06□□□□□ -0.8
ACSM3-215ENST00000614721 FAM205AQ6ZU69 1335 aa10.06□□□□□ -0.8
ACSM3-215ENST00000614721 SALL1Q9NSC2 1324 aa10.06□□□□□ -0.8
ACSM3-215ENST00000614721 AKR1B1P15121 316 aa10.06□□□□□ -0.8
ACSM3-215ENST00000614721 SSRP1Q08945 709 aaKnown RBP10.06□□□□□ -0.8
ACSM3-215ENST00000614721 ERCC4Q92889 916 aaPredicted RBP10.06□□□□□ -0.8
ACSM3-215ENST00000614721 GPKOWQ92917 476 aaPredicted RBP eCLIP10.06□□□□□ -0.8
ACSM3-215ENST00000614721 CEP95Q96GE4 821 aa10.06□□□□□ -0.8
ACSM3-215ENST00000614721 MKRN1Q9UHC7 482 aaKnown RBP10.06□□□□□ -0.8
ACSM3-215ENST00000614721 COL11A2P13942 1736 aaPredicted RBP10.06□□□□□ -0.8
ACSM3-215ENST00000614721 KIF28PB7ZC32 967 aa10.06□□□□□ -0.8
ACSM3-215ENST00000614721 MARCKSP29966 332 aaPredicted RBP10.06□□□□□ -0.8
ACSM3-215ENST00000614721 HMGN5P82970 282 aaKnown RBP10.06□□□□□ -0.8
ACSM3-215ENST00000614721 CXCL9Q07325 125 aa10.06□□□□□ -0.8
ACSM3-215ENST00000614721 NR5A1Q13285 461 aa10.06□□□□□ -0.8
ACSM3-215ENST00000614721 ZYXQ15942 572 aaKnown RBP10.06□□□□□ -0.8
ACSM3-215ENST00000614721 NBPF9Q3BBW0 867 aa10.06□□□□□ -0.8
ACSM3-215ENST00000614721 SAMD7Q7Z3H4 446 aa10.06□□□□□ -0.8
ACSM3-215ENST00000614721 PNMA1Q8ND90 353 aa10.06□□□□□ -0.8
ACSM3-215ENST00000614721 BICD2Q8TD16 824 aa10.06□□□□□ -0.8
ACSM3-215ENST00000614721 TMEM63CQ9P1W3 806 aa10.06□□□□□ -0.8
ACSM3-215ENST00000614721 ZMYM6O95789 1325 aa10.05□□□□□ -0.8
ACSM3-215ENST00000614721 RASA1P20936 1047 aa10.05□□□□□ -0.8
ACSM3-215ENST00000614721 KRT85P78386 507 aa10.05□□□□□ -0.8
ACSM3-215ENST00000614721 PRKG1Q13976 671 aa10.05□□□□□ -0.8
ACSM3-215ENST00000614721 TBC1D10BQ4KMP7 808 aaPredicted RBP10.05□□□□□ -0.8
ACSM3-215ENST00000614721 GAS2L3Q86XJ1 694 aa10.05□□□□□ -0.8
ACSM3-215ENST00000614721 CTCFLQ8NI51 663 aaPredicted RBP10.05□□□□□ -0.8
ACSM3-215ENST00000614721 SMARCC2Q8TAQ2 1214 aa10.05□□□□□ -0.8
ACSM3-215ENST00000614721 USP28Q96RU2 1077 aa10.05□□□□□ -0.8
ACSM3-215ENST00000614721 ATP6V1DQ9Y5K8 247 aa10.05□□□□□ -0.8
ACSM3-215ENST00000614721 LAMA4Q16363 1823 aa10.05□□□□□ -0.8
ACSM3-215ENST00000614721 BTBD18B2RXH4 712 aa10.05□□□□□ -0.8
ACSM3-215ENST00000614721 PPP4CP60510 307 aa10.05□□□□□ -0.8
ACSM3-215ENST00000614721 TRIM29Q14134 588 aa10.05□□□□□ -0.8
ACSM3-215ENST00000614721 SEC23AQ15436 765 aa10.05□□□□□ -0.8
ACSM3-215ENST00000614721 KRT40Q6A162 431 aa10.05□□□□□ -0.8
ACSM3-215ENST00000614721 TICAM2Q86XR7 235 aa10.05□□□□□ -0.8
ACSM3-215ENST00000614721 TRIM22Q8IYM9 498 aa10.05□□□□□ -0.8
ACSM3-215ENST00000614721 RTKN2Q8IZC4 609 aa10.05□□□□□ -0.8
ACSM3-215ENST00000614721 ALDH8A1Q9H2A2 487 aaPredicted RBP10.05□□□□□ -0.8
ACSM3-215ENST00000614721 CLIP2Q9UDT6 1046 aa10.05□□□□□ -0.8
ACSM3-215ENST00000614721 SERPINB13Q9UIV8 391 aa10.05□□□□□ -0.8
ACSM3-215ENST00000614721 ASTN2O75129 1339 aaPredicted RBP10.05□□□□□ -0.8
ACSM3-215ENST00000614721 A0A087WWV3 80 aa10.05□□□□□ -0.8
ACSM3-215ENST00000614721 PLCG2P16885 1265 aa10.05□□□□□ -0.8
ACSM3-215ENST00000614721 LIFRP42702 1097 aa10.05□□□□□ -0.8
ACSM3-215ENST00000614721 ME1P48163 572 aa10.05□□□□□ -0.8
ACSM3-215ENST00000614721 SF3A1Q15459 793 aaKnown RBP10.05□□□□□ -0.8
ACSM3-215ENST00000614721 DLK2Q6UY11 383 aa10.05□□□□□ -0.8
ACSM3-215ENST00000614721 UIMC1Q96RL1 719 aa10.05□□□□□ -0.8
ACSM3-215ENST00000614721 FHDC1Q9C0D6 1143 aaPredicted RBP10.05□□□□□ -0.8
ACSM3-215ENST00000614721 SCN9AQ15858 1988 aa10.05□□□□□ -0.8
ACSM3-215ENST00000614721 FAM205CA6NFA0 338 aa10.04□□□□□ -0.8
ACSM3-215ENST00000614721 NFKBIEO00221 500 aa10.04□□□□□ -0.8
ACSM3-215ENST00000614721 DLGAP5Q15398 846 aa10.04□□□□□ -0.8
ACSM3-215ENST00000614721 SPECC1Q5M775 1068 aa10.04□□□□□ -0.8
ACSM3-215ENST00000614721 RCSD1Q6JBY9 416 aa10.04□□□□□ -0.8
ACSM3-215ENST00000614721 SPICE1Q8N0Z3 855 aa10.04□□□□□ -0.8
ACSM3-215ENST00000614721 OXER1Q8TDS5 423 aa10.04□□□□□ -0.8
ACSM3-215ENST00000614721 CSRNP1Q96S65 589 aa10.04□□□□□ -0.8
ACSM3-215ENST00000614721 PANK2Q9BZ23 570 aa10.04□□□□□ -0.8
ACSM3-215ENST00000614721 TMEM39BQ9GZU3 492 aa10.04□□□□□ -0.8
ACSM3-215ENST00000614721 GPCPD1Q9NPB8 672 aa10.04□□□□□ -0.8
ACSM3-215ENST00000614721 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10.04□□□□□ -0.8
ACSM3-215ENST00000614721 KIF3AQ9Y496 699 aa10.04□□□□□ -0.8
ACSM3-215ENST00000614721 DUOX1Q9NRD9 1551 aa10.04□□□□□ -0.8
ACSM3-215ENST00000614721 PDS5AQ29RF7 1337 aaKnown RBP10.04□□□□□ -0.8
ACSM3-215ENST00000614721 SLC16A2P36021 539 aa10.04□□□□□ -0.8
ACSM3-215ENST00000614721 PLCB2Q00722 1185 aa10.04□□□□□ -0.8
ACSM3-215ENST00000614721 TROAPQ12815 778 aa10.04□□□□□ -0.8
ACSM3-215ENST00000614721 NTRK3Q16288 839 aa10.04□□□□□ -0.8
ACSM3-215ENST00000614721 NOM1Q5C9Z4 860 aaKnown RBP10.04□□□□□ -0.8
ACSM3-215ENST00000614721 SGMS1Q86VZ5 419 aa10.04□□□□□ -0.8
ACSM3-215ENST00000614721 FBXO18Q8NFZ0 1043 aa10.04□□□□□ -0.8
ACSM3-215ENST00000614721 RASGRP4Q8TDF6 673 aa10.04□□□□□ -0.8
ACSM3-215ENST00000614721 TMEM47Q9BQJ4 181 aa10.04□□□□□ -0.8
ACSM3-215ENST00000614721 CKAP2LQ8IYA6 745 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms