RNA–Protein interactions for RNA: ENST00000613421.4

GGA3-220, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 2

Gene GGA3, Length 5,156 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-220ENST00000613421 MRVI1Q9Y6F6 885 aa15.46■□□□□ 0.07
GGA3-220ENST00000613421 NEBLO76041 1014 aa15.46■□□□□ 0.07
GGA3-220ENST00000613421 TUBB2AQ13885 445 aa15.46■□□□□ 0.07
GGA3-220ENST00000613421 TMTC1Q8IUR5 882 aa15.46■□□□□ 0.07
GGA3-220ENST00000613421 DHX37Q8IY37 1157 aaKnown RBP15.46■□□□□ 0.07
GGA3-220ENST00000613421 CMTR1Q8N1G2 835 aaKnown RBP15.46■□□□□ 0.07
GGA3-220ENST00000613421 TIGD1Q96MW7 591 aa15.46■□□□□ 0.07
GGA3-220ENST00000613421 TUBB2BQ9BVA1 445 aa15.46■□□□□ 0.07
GGA3-220ENST00000613421 CARD6Q9BX69 1037 aa15.46■□□□□ 0.07
GGA3-220ENST00000613421 TAB2Q9NYJ8 693 aa15.46■□□□□ 0.07
GGA3-220ENST00000613421 CDC42BPGQ6DT37 1551 aa15.46■□□□□ 0.06
GGA3-220ENST00000613421 CEP152O94986 1710 aa15.46■□□□□ 0.06
GGA3-220ENST00000613421 SASH1O94885 1247 aa15.46■□□□□ 0.06
GGA3-220ENST00000613421 TNKSO95271 1327 aa15.46■□□□□ 0.06
GGA3-220ENST00000613421 PHKA1P46020 1223 aa15.46■□□□□ 0.06
GGA3-220ENST00000613421 PTPN12Q05209 780 aaKnown RBP15.46■□□□□ 0.06
GGA3-220ENST00000613421 GIGYF2Q6Y7W6 1299 aaKnown RBP15.46■□□□□ 0.06
GGA3-220ENST00000613421 CARD10Q9BWT7 1032 aa15.46■□□□□ 0.06
GGA3-220ENST00000613421 RASAL2Q9UJF2 1139 aa15.46■□□□□ 0.06
GGA3-220ENST00000613421 GYG1P46976 350 aa15.45■□□□□ 0.06
GGA3-220ENST00000613421 SPECC1LQ69YQ0 1117 aa15.45■□□□□ 0.06
GGA3-220ENST00000613421 NSUN7Q8NE18 718 aaKnown RBP15.45■□□□□ 0.06
GGA3-220ENST00000613421 LRWD1Q9UFC0 647 aa15.45■□□□□ 0.06
GGA3-220ENST00000613421 IVLP07476 585 aa15.45■□□□□ 0.06
GGA3-220ENST00000613421 ADCY7P51828 1080 aa15.45■□□□□ 0.06
GGA3-220ENST00000613421 ELF2Q15723 593 aa15.45■□□□□ 0.06
GGA3-220ENST00000613421 SDR42E1Q8WUS8 393 aa15.45■□□□□ 0.06
GGA3-220ENST00000613421 STAMQ92783 540 aa15.45■□□□□ 0.06
GGA3-220ENST00000613421 MRFAP1L1Q96HT8 127 aa15.45■□□□□ 0.06
GGA3-220ENST00000613421 GLT8D2Q9H1C3 349 aa15.45■□□□□ 0.06
GGA3-220ENST00000613421 DCAF17Q5H9S7 520 aaPredicted RBP15.45■□□□□ 0.06
GGA3-220ENST00000613421 TGFBRAP1Q8WUH2 860 aa15.45■□□□□ 0.06
GGA3-220ENST00000613421 NELFBQ8WX92 580 aa15.45■□□□□ 0.06
GGA3-220ENST00000613421 BBXQ8WY36 941 aaPredicted RBP15.45■□□□□ 0.06
GGA3-220ENST00000613421 U2AF2P26368 475 aaKnown RBP eCLIP15.45■□□□□ 0.061e-9■■■□□ 18.3
GGA3-220ENST00000613421 NDUFA8P51970 172 aa15.45■□□□□ 0.06
GGA3-220ENST00000613421 HDXQ7Z353 690 aa15.45■□□□□ 0.06
GGA3-220ENST00000613421 NUP58Q9BVL2 599 aa15.45■□□□□ 0.06
GGA3-220ENST00000613421 RTEL1Q9NZ71 1219 aa15.45■□□□□ 0.06
GGA3-220ENST00000613421 VPS18Q9P253 973 aa15.45■□□□□ 0.06
GGA3-220ENST00000613421 CLIC4Q9Y696 253 aa15.45■□□□□ 0.06
GGA3-220ENST00000613421 M0R2C6 588 aa15.44■□□□□ 0.06
GGA3-220ENST00000613421 KRT9P35527 623 aa15.44■□□□□ 0.06
GGA3-220ENST00000613421 HAUS3Q68CZ6 603 aa15.44■□□□□ 0.06
GGA3-220ENST00000613421 ASAP1Q9ULH1 1129 aa15.44■□□□□ 0.06
GGA3-220ENST00000613421 A0A1W2PQ27 194 aa15.44■□□□□ 0.06
GGA3-220ENST00000613421 A0A1W2PQ64 194 aa15.44■□□□□ 0.06
GGA3-220ENST00000613421 A0A1W2PQD8 194 aa15.44■□□□□ 0.06
GGA3-220ENST00000613421 CCDC155Q8N6L0 562 aa15.44■□□□□ 0.06
GGA3-220ENST00000613421 BLZF1Q9H2G9 400 aa15.44■□□□□ 0.06
GGA3-220ENST00000613421 CARMIL3Q8ND23 1372 aa15.44■□□□□ 0.06
GGA3-220ENST00000613421 LARGE1O95461 756 aa15.44■□□□□ 0.06
GGA3-220ENST00000613421 VAV2P52735 878 aa15.44■□□□□ 0.06
GGA3-220ENST00000613421 ATG3Q9NT62 314 aa15.44■□□□□ 0.06
GGA3-220ENST00000613421 TULP4Q9NRJ4 1543 aa15.44■□□□□ 0.06
GGA3-220ENST00000613421 CAPN2P17655 700 aa15.44■□□□□ 0.06
GGA3-220ENST00000613421 RAPGEF1Q13905 1077 aa15.44■□□□□ 0.06
GGA3-220ENST00000613421 SNX29Q8TEQ0 813 aa15.44■□□□□ 0.06
GGA3-220ENST00000613421 NCAPD2Q15021 1401 aa15.43■□□□□ 0.06
GGA3-220ENST00000613421 RBM6P78332 1123 aaKnown RBP15.43■□□□□ 0.06
GGA3-220ENST00000613421 CHRNDQ07001 517 aa15.43■□□□□ 0.06
GGA3-220ENST00000613421 LRMPQ12912 555 aa15.43■□□□□ 0.06
GGA3-220ENST00000613421 BTBD18B2RXH4 712 aa15.43■□□□□ 0.06
GGA3-220ENST00000613421 NECTIN1Q15223 517 aa15.43■□□□□ 0.06
GGA3-220ENST00000613421 CABP7Q86V35 215 aa15.43■□□□□ 0.06
GGA3-220ENST00000613421 MPHOSPH6Q99547 160 aaKnown RBP15.43■□□□□ 0.06
GGA3-220ENST00000613421 LMTK2Q8IWU2 1503 aa15.43■□□□□ 0.06
GGA3-220ENST00000613421 WDR17Q8IZU2 1322 aa15.43■□□□□ 0.06
GGA3-220ENST00000613421 IBSPP21815 317 aaPredicted RBP15.43■□□□□ 0.06
GGA3-220ENST00000613421 KRBA2Q6ZNG9 492 aa15.43■□□□□ 0.06
GGA3-220ENST00000613421 PLCD4Q9BRC7 762 aa15.43■□□□□ 0.06
GGA3-220ENST00000613421 JAKMIP2Q96AA8 810 aa15.43■□□□□ 0.06
GGA3-220ENST00000613421 HEG1Q9ULI3 1381 aa15.42■□□□□ 0.06
GGA3-220ENST00000613421 PHACTR2O75167 634 aa15.42■□□□□ 0.06
GGA3-220ENST00000613421 EPB41P11171 864 aaKnown RBP15.42■□□□□ 0.06
GGA3-220ENST00000613421 TNNC1P63316 161 aa15.42■□□□□ 0.06
GGA3-220ENST00000613421 CALCRLQ16602 461 aa15.42■□□□□ 0.06
GGA3-220ENST00000613421 TDRD7Q8NHU6 1098 aaKnown RBP15.42■□□□□ 0.06
GGA3-220ENST00000613421 TBC1D22AQ8WUA7 517 aa15.42■□□□□ 0.06
GGA3-220ENST00000613421 VWA3BQ502W6 1294 aa15.42■□□□□ 0.06
GGA3-220ENST00000613421 FMNL3Q8IVF7 1028 aa15.42■□□□□ 0.06
GGA3-220ENST00000613421 REXO1Q8N1G1 1221 aaKnown RBP15.42■□□□□ 0.06
GGA3-220ENST00000613421 ZFP91Q96JP5 570 aaPredicted RBP15.42■□□□□ 0.06
GGA3-220ENST00000613421 CLIC6Q96NY7 704 aa15.42■□□□□ 0.06
GGA3-220ENST00000613421 RSPH14Q9UHP6 348 aa15.42■□□□□ 0.06
GGA3-220ENST00000613421 ABCA9Q8IUA7 1624 aa15.41■□□□□ 0.06
GGA3-220ENST00000613421 WDHD1O75717 1129 aaPredicted RBP15.41■□□□□ 0.06
GGA3-220ENST00000613421 PLS1Q14651 629 aa15.41■□□□□ 0.06
GGA3-220ENST00000613421 IFT81Q8WYA0 676 aa15.41■□□□□ 0.06
GGA3-220ENST00000613421 IL6STP40189 918 aaPredicted RBP15.41■□□□□ 0.06
GGA3-220ENST00000613421 LRRC8AQ8IWT6 810 aa15.41■□□□□ 0.06
GGA3-220ENST00000613421 TRIML1Q8N9V2 468 aa15.41■□□□□ 0.06
GGA3-220ENST00000613421 SH2D4AQ9H788 454 aa15.41■□□□□ 0.06
GGA3-220ENST00000613421 ZBTB1Q9Y2K1 713 aa15.41■□□□□ 0.06
GGA3-220ENST00000613421 APOA5Q6Q788 366 aa15.41■□□□□ 0.06
GGA3-220ENST00000613421 FCHSD1Q86WN1 690 aa15.41■□□□□ 0.06
GGA3-220ENST00000613421 FRMD4BQ9Y2L6 1034 aa15.41■□□□□ 0.06
GGA3-220ENST00000613421 TMEM110-MUSTN1A8MSY1 372 aa15.41■□□□□ 0.06
GGA3-220ENST00000613421 CETN3O15182 167 aa15.41■□□□□ 0.06
GGA3-220ENST00000613421 BLIDQ8IZY5 108 aa15.41■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms