RNA–Protein interactions for RNA: ENST00000612509.4

SEMA3B-211, Transcript of semaphorin 3B, humanhuman

TSL 5

Gene SEMA3B, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-211ENST00000612509 TBC1D2Q9BYX2 928 aa21.72■■□□□ 1.07
SEMA3B-211ENST00000612509 OSBPL3Q9H4L5 887 aa21.72■■□□□ 1.07
SEMA3B-211ENST00000612509 ZBTB21Q9ULJ3 1066 aa21.72■■□□□ 1.07
SEMA3B-211ENST00000612509 USP17L5A8MUK1 530 aa21.71■■□□□ 1.07
SEMA3B-211ENST00000612509 SHMT1P34896 483 aa21.71■■□□□ 1.07
SEMA3B-211ENST00000612509 JAG1P78504 1218 aa21.71■■□□□ 1.07
SEMA3B-211ENST00000612509 ZMYM1Q5SVZ6 1142 aa21.71■■□□□ 1.07
SEMA3B-211ENST00000612509 ANKRD23Q86SG2 305 aa21.71■■□□□ 1.07
SEMA3B-211ENST00000612509 GINM1Q9NU53 330 aa21.71■■□□□ 1.07
SEMA3B-211ENST00000612509 AMOTL1Q8IY63 956 aa21.7■■□□□ 1.06
SEMA3B-211ENST00000612509 ZNF280CQ8ND82 737 aa21.7■■□□□ 1.06
SEMA3B-211ENST00000612509 SEC62Q99442 399 aaKnown RBP21.7■■□□□ 1.06
SEMA3B-211ENST00000612509 AS3MTQ9HBK9 375 aa21.7■■□□□ 1.06
SEMA3B-211ENST00000612509 ZFYVE28Q9HCC9 887 aa21.7■■□□□ 1.06
SEMA3B-211ENST00000612509 FKTNO75072 461 aa21.69■■□□□ 1.06
SEMA3B-211ENST00000612509 FASTKD5Q7L8L6 764 aaKnown RBP21.69■■□□□ 1.06
SEMA3B-211ENST00000612509 ARPP21Q9UBL0 812 aaPredicted RBP21.69■■□□□ 1.06
SEMA3B-211ENST00000612509 CYP2D7A0A087X1C5 515 aa21.68■■□□□ 1.06
SEMA3B-211ENST00000612509 TRIM6-TRIM34B2RNG4 842 aa21.68■■□□□ 1.06
SEMA3B-211ENST00000612509 USP17L12C9JPN9 530 aa21.68■■□□□ 1.06
SEMA3B-211ENST00000612509 USP17L21D6R901 530 aa21.68■■□□□ 1.06
SEMA3B-211ENST00000612509 PDHXO00330 501 aa21.68■■□□□ 1.06
SEMA3B-211ENST00000612509 GH2P01242 217 aa21.68■■□□□ 1.06
SEMA3B-211ENST00000612509 GNAT2P19087 354 aa21.68■■□□□ 1.06
SEMA3B-211ENST00000612509 SPP2Q13103 211 aa21.68■■□□□ 1.06
SEMA3B-211ENST00000612509 CERKLQ49MI3 558 aaPredicted RBP21.68■■□□□ 1.06
SEMA3B-211ENST00000612509 C12orf60Q5U649 245 aa21.68■■□□□ 1.06
SEMA3B-211ENST00000612509 GPAT2Q6NUI2 795 aa21.68■■□□□ 1.06
SEMA3B-211ENST00000612509 GADL1Q6ZQY3 521 aa21.68■■□□□ 1.06
SEMA3B-211ENST00000612509 SLC44A5Q8NCS7 719 aa21.68■■□□□ 1.06
SEMA3B-211ENST00000612509 EPB41L4AQ9HCS5 686 aaPredicted RBP21.68■■□□□ 1.06
SEMA3B-211ENST00000612509 GSG1L2A8MUP6 293 aa21.67■■□□□ 1.06
SEMA3B-211ENST00000612509 PDE4AP27815 886 aa21.67■■□□□ 1.06
SEMA3B-211ENST00000612509 GIMAP6Q6P9H5 292 aa21.67■■□□□ 1.06
SEMA3B-211ENST00000612509 CTR9Q6PD62 1173 aa21.67■■□□□ 1.06
SEMA3B-211ENST00000612509 DYNLL2Q96FJ2 89 aa21.67■■□□□ 1.06
SEMA3B-211ENST00000612509 WDR18Q9BV38 432 aa21.67■■□□□ 1.06
SEMA3B-211ENST00000612509 SWAP70Q9UH65 585 aa21.67■■□□□ 1.06
SEMA3B-211ENST00000612509 TAOK2Q9UL54 1235 aa21.67■■□□□ 1.06
SEMA3B-211ENST00000612509 SMIM22K7EJ46 135 aa21.66■■□□□ 1.06
SEMA3B-211ENST00000612509 MTMR2Q13614 643 aa21.66■■□□□ 1.06
SEMA3B-211ENST00000612509 ABCB5Q2M3G0 1257 aa21.66■■□□□ 1.06
SEMA3B-211ENST00000612509 CTU1Q7Z7A3 348 aaKnown RBP21.66■■□□□ 1.06
SEMA3B-211ENST00000612509 PARK7Q99497 189 aaKnown RBP21.66■■□□□ 1.06
SEMA3B-211ENST00000612509 ROBO3Q96MS0 1386 aa21.65■■□□□ 1.06
SEMA3B-211ENST00000612509 ADGRA2Q96PE1 1338 aa21.65■■□□□ 1.06
SEMA3B-211ENST00000612509 TLR2O60603 784 aa21.65■■□□□ 1.06
SEMA3B-211ENST00000612509 HMGCS2P54868 508 aa21.65■■□□□ 1.06
SEMA3B-211ENST00000612509 DGKZQ13574 1117 aa21.65■■□□□ 1.06
SEMA3B-211ENST00000612509 TICAM2Q86XR7 235 aa21.65■■□□□ 1.06
SEMA3B-211ENST00000612509 PROCA1Q8NCQ7 364 aaPredicted RBP21.65■■□□□ 1.06
SEMA3B-211ENST00000612509 RILPL2Q969X0 211 aa21.65■■□□□ 1.06
SEMA3B-211ENST00000612509 MCOLN1Q9GZU1 580 aa21.65■■□□□ 1.06
SEMA3B-211ENST00000612509 AGTPBP1Q9UPW5 1226 aa21.65■■□□□ 1.06
SEMA3B-211ENST00000612509 SLC45A1Q9Y2W3 748 aa21.65■■□□□ 1.06
SEMA3B-211ENST00000612509 TDO2P48775 406 aa21.64■■□□□ 1.05
SEMA3B-211ENST00000612509 SBK1Q52WX2 424 aa21.64■■□□□ 1.05
SEMA3B-211ENST00000612509 SH3D19Q5HYK7 790 aa21.64■■□□□ 1.05
SEMA3B-211ENST00000612509 TREML2Q5T2D2 321 aa21.64■■□□□ 1.05
SEMA3B-211ENST00000612509 CCDC129Q6ZRS4 1044 aa21.64■■□□□ 1.05
SEMA3B-211ENST00000612509 C16orf86Q6ZW13 317 aa21.64■■□□□ 1.05
SEMA3B-211ENST00000612509 CABP5Q9NP86 173 aa21.64■■□□□ 1.05
SEMA3B-211ENST00000612509 A0A0D9SFI3 127 aa21.63■■□□□ 1.05
SEMA3B-211ENST00000612509 BACE1P56817 501 aa21.63■■□□□ 1.05
SEMA3B-211ENST00000612509 SP3Q02447 781 aa21.63■■□□□ 1.05
SEMA3B-211ENST00000612509 RAB3GAP1Q15042 981 aa21.63■■□□□ 1.05
SEMA3B-211ENST00000612509 FAM227BQ96M60 508 aa21.63■■□□□ 1.05
SEMA3B-211ENST00000612509 HELLSQ9NRZ9 838 aa21.63■■□□□ 1.05
SEMA3B-211ENST00000612509 ZSWIM8A7E2V4 1837 aa21.63■■□□□ 1.05
SEMA3B-211ENST00000612509 PATL2C9JE40 543 aaKnown RBP21.62■■□□□ 1.05
SEMA3B-211ENST00000612509 APPP05067 770 aa21.62■■□□□ 1.05
SEMA3B-211ENST00000612509 CYP2C8P10632 490 aa21.62■■□□□ 1.05
SEMA3B-211ENST00000612509 GUCY1A2P33402 732 aa21.62■■□□□ 1.05
SEMA3B-211ENST00000612509 CDK8P49336 464 aa21.62■■□□□ 1.05
SEMA3B-211ENST00000612509 IFNL3Q8IZI9 196 aa21.62■■□□□ 1.05
SEMA3B-211ENST00000612509 CD99L2Q8TCZ2 262 aa21.62■■□□□ 1.05
SEMA3B-211ENST00000612509 ERO1AQ96HE7 468 aa21.62■■□□□ 1.05
SEMA3B-211ENST00000612509 NACAP1Q9BZK3 213 aa21.62■■□□□ 1.05
SEMA3B-211ENST00000612509 GREB1LQ9C091 1923 aaPredicted RBP21.62■■□□□ 1.05
SEMA3B-211ENST00000612509 USP17L10C9JJH3 530 aa21.61■■□□□ 1.05
SEMA3B-211ENST00000612509 MPHOSPH10O00566 681 aaKnown RBP21.61■■□□□ 1.05
SEMA3B-211ENST00000612509 FOXP2O15409 715 aa21.61■■□□□ 1.05
SEMA3B-211ENST00000612509 AKR1B1P15121 316 aa21.61■■□□□ 1.05
SEMA3B-211ENST00000612509 NMIQ13287 307 aaPredicted RBP21.61■■□□□ 1.05
SEMA3B-211ENST00000612509 SEPT2Q15019 361 aa21.61■■□□□ 1.05
SEMA3B-211ENST00000612509 TMEM179Q6ZVK1 233 aa21.61■■□□□ 1.05
SEMA3B-211ENST00000612509 FEZ1Q99689 392 aa21.61■■□□□ 1.05
SEMA3B-211ENST00000612509 TMOD4Q9NZQ9 345 aa21.61■■□□□ 1.05
SEMA3B-211ENST00000612509 MINDY4BA8MYZ0 360 aa21.6■■□□□ 1.05
SEMA3B-211ENST00000612509 C19orf81C9J6K1 198 aa21.6■■□□□ 1.05
SEMA3B-211ENST00000612509 TTC22Q5TAA0 569 aa21.6■■□□□ 1.05
SEMA3B-211ENST00000612509 C17orf99Q6UX52 265 aa21.6■■□□□ 1.05
SEMA3B-211ENST00000612509 NAPBQ9H115 298 aa21.6■■□□□ 1.05
SEMA3B-211ENST00000612509 CPA4Q9UI42 421 aa21.6■■□□□ 1.05
SEMA3B-211ENST00000612509 PNMA3Q9UL41 463 aa21.6■■□□□ 1.05
SEMA3B-211ENST00000612509 GSPT1P15170 499 aaKnown RBP21.59■■□□□ 1.05
SEMA3B-211ENST00000612509 SDSP20132 328 aa21.59■■□□□ 1.05
SEMA3B-211ENST00000612509 MCMDC2Q4G0Z9 681 aa21.59■■□□□ 1.05
SEMA3B-211ENST00000612509 ABHD8Q96I13 439 aa21.59■■□□□ 1.05
SEMA3B-211ENST00000612509 CCDC17Q96LX7 622 aa21.59■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 71 ms