RNA–Protein interactions for RNA: ENST00000611869.4

TCF3-220, Transcript of transcription factor 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TCF3, Length 4,409 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF3-220ENST00000611869 RFX5P48382 616 aaPredicted RBP14.87□□□□□ -0.03
TCF3-220ENST00000611869 NR5A1Q13285 461 aa14.87□□□□□ -0.03
TCF3-220ENST00000611869 TMEM87AQ8NBN3 555 aa14.87□□□□□ -0.03
TCF3-220ENST00000611869 BAG1Q99933 345 aaPredicted RBP14.87□□□□□ -0.03
TCF3-220ENST00000611869 MMRN2Q9H8L6 949 aa14.87□□□□□ -0.03
TCF3-220ENST00000611869 EIF3JO75822 258 aaKnown RBP14.86□□□□□ -0.03
TCF3-220ENST00000611869 TAF4BQ92750 862 aa14.86□□□□□ -0.03
TCF3-220ENST00000611869 GPKOWQ92917 476 aaPredicted RBP eCLIP14.86□□□□□ -0.03
TCF3-220ENST00000611869 LRRC27Q9C0I9 530 aa14.86□□□□□ -0.03
TCF3-220ENST00000611869 NRBP1Q9UHY1 535 aa14.86□□□□□ -0.03
TCF3-220ENST00000611869 C11orf57Q6ZUT1 292 aaPredicted RBP14.86□□□□□ -0.03
TCF3-220ENST00000611869 SPDYE3A6NKU9 549 aa14.86□□□□□ -0.03
TCF3-220ENST00000611869 RIOK3O14730 519 aaKnown RBP14.86□□□□□ -0.03
TCF3-220ENST00000611869 IQCEQ6IPM2 695 aa14.86□□□□□ -0.03
TCF3-220ENST00000611869 SMIM5Q71RC9 77 aa14.86□□□□□ -0.03
TCF3-220ENST00000611869 TSC1Q92574 1164 aa14.86□□□□□ -0.03
TCF3-220ENST00000611869 A0A1W2PQ27 194 aa14.86□□□□□ -0.03
TCF3-220ENST00000611869 A0A1W2PQ64 194 aa14.86□□□□□ -0.03
TCF3-220ENST00000611869 A0A1W2PQD8 194 aa14.86□□□□□ -0.03
TCF3-220ENST00000611869 IGSF22Q8N9C0 903 aa14.86□□□□□ -0.03
TCF3-220ENST00000611869 FERMT2Q96AC1 680 aa14.86□□□□□ -0.03
TCF3-220ENST00000611869 POLR3EQ9NVU0 708 aa14.86□□□□□ -0.03
TCF3-220ENST00000611869 MYO1BO43795 1136 aa14.85□□□□□ -0.03
TCF3-220ENST00000611869 ERMNQ8TAM6 284 aa14.85□□□□□ -0.03
TCF3-220ENST00000611869 CDHR2Q9BYE9 1310 aa14.85□□□□□ -0.03
TCF3-220ENST00000611869 SHPRHQ149N8 1683 aa14.85□□□□□ -0.03
TCF3-220ENST00000611869 ZNF609O15014 1411 aa14.85□□□□□ -0.03
TCF3-220ENST00000611869 ZNF500O60304 480 aaPredicted RBP14.85□□□□□ -0.03
TCF3-220ENST00000611869 TBCAO75347 108 aaKnown RBP14.85□□□□□ -0.03
TCF3-220ENST00000611869 DPCR1Q3MIW9 517 aa14.85□□□□□ -0.03
TCF3-220ENST00000611869 TTF2Q9UNY4 1162 aaKnown RBP14.85□□□□□ -0.03
TCF3-220ENST00000611869 JADE2Q9NQC1 790 aa14.85□□□□□ -0.03
TCF3-220ENST00000611869 RIPOR2Q9Y4F9 1068 aa14.85□□□□□ -0.03
TCF3-220ENST00000611869 PCDHA5Q9Y5H7 936 aa14.85□□□□□ -0.03
TCF3-220ENST00000611869 SYNRGQ9UMZ2 1314 aa14.85□□□□□ -0.03
TCF3-220ENST00000611869 POLR3GO15318 223 aaPredicted RBP14.84□□□□□ -0.03
TCF3-220ENST00000611869 NONOQ15233 471 aaKnown RBP eCLIP14.84□□□□□ -0.039e-7■■■■□ 19.7
TCF3-220ENST00000611869 RBM26Q5T8P6 1007 aaKnown RBP14.84□□□□□ -0.03
TCF3-220ENST00000611869 MSL1Q68DK7 614 aa14.84□□□□□ -0.03
TCF3-220ENST00000611869 KRBA2Q6ZNG9 492 aa14.84□□□□□ -0.03
TCF3-220ENST00000611869 PGBD1Q96JS3 809 aa14.84□□□□□ -0.03
TCF3-220ENST00000611869 UTYO14607 1347 aa14.84□□□□□ -0.03
TCF3-220ENST00000611869 PXDNQ92626 1479 aa14.84□□□□□ -0.03
TCF3-220ENST00000611869 SCG2P13521 617 aa14.84□□□□□ -0.03
TCF3-220ENST00000611869 BTDP43251 543 aa14.84□□□□□ -0.03
TCF3-220ENST00000611869 MRPL12P52815 198 aaKnown RBP14.84□□□□□ -0.03
TCF3-220ENST00000611869 PDE4DQ08499 809 aa14.84□□□□□ -0.03
TCF3-220ENST00000611869 TBC1D22AQ8WUA7 517 aa14.84□□□□□ -0.03
TCF3-220ENST00000611869 DRC1Q96MC2 740 aa14.84□□□□□ -0.03
TCF3-220ENST00000611869 SALL3Q9BXA9 1300 aa14.84□□□□□ -0.03
TCF3-220ENST00000611869 HDAC9Q9UKV0 1011 aa14.84□□□□□ -0.03
TCF3-220ENST00000611869 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.84□□□□□ -0.03
TCF3-220ENST00000611869 ERICH4A6NGS2 130 aa14.84□□□□□ -0.03
TCF3-220ENST00000611869 AKR1B15C9JRZ8 316 aaPredicted RBP14.84□□□□□ -0.03
TCF3-220ENST00000611869 PLCD1P51178 756 aa14.84□□□□□ -0.03
TCF3-220ENST00000611869 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.84□□□□□ -0.03
TCF3-220ENST00000611869 ATP8A2Q9NTI2 1148 aa14.84□□□□□ -0.03
TCF3-220ENST00000611869 PYCARDQ9ULZ3 195 aa14.84□□□□□ -0.03
TCF3-220ENST00000611869 IFNAR1P17181 557 aa14.84□□□□□ -0.03
TCF3-220ENST00000611869 SCNN1DP51172 638 aa14.84□□□□□ -0.03
TCF3-220ENST00000611869 DIXDC1Q155Q3 683 aa14.84□□□□□ -0.03
TCF3-220ENST00000611869 CYB5R4Q7L1T6 521 aa14.84□□□□□ -0.03
TCF3-220ENST00000611869 CENPHQ9H3R5 247 aa14.84□□□□□ -0.03
TCF3-220ENST00000611869 EHMT1Q9H9B1 1298 aa14.84□□□□□ -0.03
TCF3-220ENST00000611869 DOK7Q18PE1 504 aa14.83□□□□□ -0.03
TCF3-220ENST00000611869 CELF1Q92879 486 aaKnown RBP14.83□□□□□ -0.03
TCF3-220ENST00000611869 THRAP3Q9Y2W1 955 aaKnown RBP14.83□□□□□ -0.03
TCF3-220ENST00000611869 FMNL1O95466 1100 aaPredicted RBP14.83□□□□□ -0.04
TCF3-220ENST00000611869 CYLC1P35663 651 aaPredicted RBP14.83□□□□□ -0.04
TCF3-220ENST00000611869 MATR3P43243 847 aaKnown RBP eCLIP14.83□□□□□ -0.04
TCF3-220ENST00000611869 INF2Q27J81 1249 aa14.83□□□□□ -0.04
TCF3-220ENST00000611869 BLIDQ8IZY5 108 aa14.83□□□□□ -0.04
TCF3-220ENST00000611869 GPR101Q96P66 508 aaPredicted RBP14.83□□□□□ -0.04
TCF3-220ENST00000611869 FANCLQ9NW38 375 aa14.83□□□□□ -0.04
TCF3-220ENST00000611869 LUC7L2Q9Y383 392 aaKnown RBP14.83□□□□□ -0.04
TCF3-220ENST00000611869 SOS2Q07890 1332 aaPredicted RBP14.83□□□□□ -0.04
TCF3-220ENST00000611869 LIFRP42702 1097 aa14.83□□□□□ -0.04
TCF3-220ENST00000611869 TSGA10IPQ3SY00 556 aa14.83□□□□□ -0.04
TCF3-220ENST00000611869 VPS36Q86VN1 386 aa14.83□□□□□ -0.04
TCF3-220ENST00000611869 TDRD7Q8NHU6 1098 aaKnown RBP14.83□□□□□ -0.04
TCF3-220ENST00000611869 KLRF2D3W0D1 207 aa14.82□□□□□ -0.04
TCF3-220ENST00000611869 ERCC3P19447 782 aa14.82□□□□□ -0.04
TCF3-220ENST00000611869 PAFAH1B1P43034 410 aa14.82□□□□□ -0.04
TCF3-220ENST00000611869 ARID5AQ03989 594 aa14.82□□□□□ -0.04
TCF3-220ENST00000611869 PTGDRQ13258 359 aa14.82□□□□□ -0.04
TCF3-220ENST00000611869 SV2BQ7L1I2 683 aa14.82□□□□□ -0.04
TCF3-220ENST00000611869 SYCP3Q8IZU3 236 aa14.82□□□□□ -0.04
TCF3-220ENST00000611869 ZBTB9Q96C00 473 aa14.82□□□□□ -0.04
TCF3-220ENST00000611869 SPAG5Q96R06 1193 aa14.82□□□□□ -0.04
TCF3-220ENST00000611869 GBP3Q9H0R5 595 aa14.82□□□□□ -0.04
TCF3-220ENST00000611869 USP40Q9NVE5 1235 aa14.82□□□□□ -0.04
TCF3-220ENST00000611869 BSDC1Q9NW68 430 aaPredicted RBP14.82□□□□□ -0.04
TCF3-220ENST00000611869 GUCA1BQ9UMX6 200 aa14.82□□□□□ -0.04
TCF3-220ENST00000611869 RIMS1Q86UR5 1692 aaKnown RBP14.82□□□□□ -0.04
TCF3-220ENST00000611869 NEDD4P46934 1319 aa14.82□□□□□ -0.04
TCF3-220ENST00000611869 APBA3O96018 575 aa14.82□□□□□ -0.04
TCF3-220ENST00000611869 SLC1A4P43007 532 aa14.82□□□□□ -0.04
TCF3-220ENST00000611869 CLEC4GQ6UXB4 293 aa14.82□□□□□ -0.04
TCF3-220ENST00000611869 FCHSD1Q86WN1 690 aa14.82□□□□□ -0.04
TCF3-220ENST00000611869 MB21D2Q8IYB1 491 aaPredicted RBP14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 120.4 ms