RNA–Protein interactions for RNA: ENST00000611625.4

CDH1-212, Transcript of cadherin 1, humanhuman

TSL 5 BASIC

Gene CDH1, Length 4,878 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-212ENST00000611625 INO80Q9ULG1 1556 aaPredicted RBP13.97□□□□□ -0.17
CDH1-212ENST00000611625 HSPA2P54652 639 aa13.97□□□□□ -0.17
CDH1-212ENST00000611625 DHX37Q8IY37 1157 aaKnown RBP13.97□□□□□ -0.17
CDH1-212ENST00000611625 GPR161Q8N6U8 529 aaKnown RBP13.97□□□□□ -0.17
CDH1-212ENST00000611625 NELFBQ8WX92 580 aa13.97□□□□□ -0.17
CDH1-212ENST00000611625 AATFQ9NY61 560 aaKnown RBP eCLIP13.97□□□□□ -0.17
CDH1-212ENST00000611625 CCDC172P0C7W6 258 aa13.96□□□□□ -0.17
CDH1-212ENST00000611625 HMGB2P26583 209 aaKnown RBP13.96□□□□□ -0.17
CDH1-212ENST00000611625 ST5P78524 1137 aa13.96□□□□□ -0.17
CDH1-212ENST00000611625 EPHA10Q5JZY3 1008 aa13.96□□□□□ -0.17
CDH1-212ENST00000611625 JAKMIP2Q96AA8 810 aa13.96□□□□□ -0.17
CDH1-212ENST00000611625 CRB1P82279 1406 aa13.96□□□□□ -0.17
CDH1-212ENST00000611625 PHKA1P46020 1223 aa13.96□□□□□ -0.17
CDH1-212ENST00000611625 PPP1R13BQ96KQ4 1090 aa13.96□□□□□ -0.17
CDH1-212ENST00000611625 CCDC87Q9NVE4 849 aa13.96□□□□□ -0.17
CDH1-212ENST00000611625 GOLGA6L10A0A0M3HER8 536 aa13.96□□□□□ -0.17
CDH1-212ENST00000611625 IKBKBO14920 756 aa13.96□□□□□ -0.17
CDH1-212ENST00000611625 OAS2P29728 719 aaKnown RBP13.96□□□□□ -0.17
CDH1-212ENST00000611625 CCDC51Q96ER9 411 aa13.96□□□□□ -0.17
CDH1-212ENST00000611625 GREM2Q9H772 168 aa13.96□□□□□ -0.17
CDH1-212ENST00000611625 PPP6R2O75170 966 aa13.96□□□□□ -0.18
CDH1-212ENST00000611625 CNNM4Q6P4Q7 775 aa13.96□□□□□ -0.18
CDH1-212ENST00000611625 TNKSO95271 1327 aa13.96□□□□□ -0.18
CDH1-212ENST00000611625 PDE8BO95263 885 aa13.95□□□□□ -0.18
CDH1-212ENST00000611625 DDIT3P35638 169 aa13.95□□□□□ -0.18
CDH1-212ENST00000611625 PRM3Q9NNZ6 103 aa13.95□□□□□ -0.18
CDH1-212ENST00000611625 NCOA3Q9Y6Q9 1424 aa13.95□□□□□ -0.18
CDH1-212ENST00000611625 EFCAB8A8MWE9 144 aa13.95□□□□□ -0.18
CDH1-212ENST00000611625 EBAG9O00559 213 aa13.95□□□□□ -0.18
CDH1-212ENST00000611625 CTNNBL1Q8WYA6 563 aaPredicted RBP13.95□□□□□ -0.18
CDH1-212ENST00000611625 NUP58Q9BVL2 599 aa13.95□□□□□ -0.18
CDH1-212ENST00000611625 ANKARQ7Z5J8 1434 aa13.95□□□□□ -0.18
CDH1-212ENST00000611625 TRAF5O00463 557 aa13.95□□□□□ -0.18
CDH1-212ENST00000611625 KIAA0753Q2KHM9 967 aa13.95□□□□□ -0.18
CDH1-212ENST00000611625 FAM76AQ8TAV0 307 aa13.95□□□□□ -0.18
CDH1-212ENST00000611625 ATRIPQ8WXE1 791 aa13.95□□□□□ -0.18
CDH1-212ENST00000611625 PGBD1Q96JS3 809 aa13.95□□□□□ -0.18
CDH1-212ENST00000611625 TRMT1LQ7Z2T5 733 aaKnown RBP13.94□□□□□ -0.18
CDH1-212ENST00000611625 TBC1D5Q92609 795 aa13.94□□□□□ -0.18
CDH1-212ENST00000611625 ATG3Q9NT62 314 aa13.94□□□□□ -0.18
CDH1-212ENST00000611625 NCAPD2Q15021 1401 aa13.94□□□□□ -0.18
CDH1-212ENST00000611625 DNAJC21Q5F1R6 531 aaKnown RBP13.94□□□□□ -0.18
CDH1-212ENST00000611625 TEX11Q8IYF3 940 aa13.94□□□□□ -0.18
CDH1-212ENST00000611625 IFT81Q8WYA0 676 aa13.94□□□□□ -0.18
CDH1-212ENST00000611625 SAP30BPQ9UHR5 308 aaKnown RBP13.94□□□□□ -0.18
CDH1-212ENST00000611625 NRXN1Q9ULB1 1477 aa13.94□□□□□ -0.18
CDH1-212ENST00000611625 NEXMIFQ5QGS0 1516 aa13.94□□□□□ -0.18
CDH1-212ENST00000611625 MAP3K15Q6ZN16 1313 aa13.94□□□□□ -0.18
CDH1-212ENST00000611625 STX10O60499 249 aa13.94□□□□□ -0.18
CDH1-212ENST00000611625 GBP2P32456 591 aaPredicted RBP13.94□□□□□ -0.18
CDH1-212ENST00000611625 PI16Q6UXB8 463 aa13.94□□□□□ -0.18
CDH1-212ENST00000611625 USP17L12C9JPN9 530 aa13.93□□□□□ -0.18
CDH1-212ENST00000611625 USP17L21D6R901 530 aa13.93□□□□□ -0.18
CDH1-212ENST00000611625 SMC1AQ14683 1233 aaKnown RBP13.93□□□□□ -0.18
CDH1-212ENST00000611625 FCHSD1Q86WN1 690 aa13.93□□□□□ -0.18
CDH1-212ENST00000611625 SDR42E1Q8WUS8 393 aa13.93□□□□□ -0.18
CDH1-212ENST00000611625 SPTLC3Q9NUV7 552 aa13.93□□□□□ -0.18
CDH1-212ENST00000611625 RTCBQ9Y3I0 505 aaKnown RBP13.93□□□□□ -0.18
CDH1-212ENST00000611625 MYO3AQ8NEV4 1616 aa13.93□□□□□ -0.18
CDH1-212ENST00000611625 CCNT1O60563 726 aaKnown RBP13.93□□□□□ -0.18
CDH1-212ENST00000611625 IBSPP21815 317 aaPredicted RBP13.93□□□□□ -0.18
CDH1-212ENST00000611625 NONOQ15233 471 aaKnown RBP eCLIP13.93□□□□□ -0.18
CDH1-212ENST00000611625 SPATA1Q5VX52 437 aa13.93□□□□□ -0.18
CDH1-212ENST00000611625 LMBR1Q8WVP7 490 aa13.93□□□□□ -0.18
CDH1-212ENST00000611625 C10orf67Q8IYJ2 551 aa13.93□□□□□ -0.18
CDH1-212ENST00000611625 GIMAP7Q8NHV1 300 aa13.93□□□□□ -0.18
CDH1-212ENST00000611625 ZSCAN10Q96SZ4 725 aaPredicted RBP13.93□□□□□ -0.18
CDH1-212ENST00000611625 PUS7LQ9H0K6 701 aaKnown RBP13.93□□□□□ -0.18
CDH1-212ENST00000611625 ZNF219Q9P2Y4 722 aaPredicted RBP13.93□□□□□ -0.18
CDH1-212ENST00000611625 CAMSAP1Q5T5Y3 1602 aa13.93□□□□□ -0.18
CDH1-212ENST00000611625 ARID4AP29374 1257 aaPredicted RBP13.93□□□□□ -0.18
CDH1-212ENST00000611625 TXKP42681 527 aa13.93□□□□□ -0.18
CDH1-212ENST00000611625 BCAMP50895 628 aa13.93□□□□□ -0.18
CDH1-212ENST00000611625 BRD3Q15059 726 aa13.93□□□□□ -0.18
CDH1-212ENST00000611625 FAM47AQ5JRC9 791 aa13.93□□□□□ -0.18
CDH1-212ENST00000611625 CFAP58Q5T655 872 aa13.93□□□□□ -0.18
CDH1-212ENST00000611625 GIGYF2Q6Y7W6 1299 aaKnown RBP13.93□□□□□ -0.18
CDH1-212ENST00000611625 AFAP1L1Q8TED9 768 aa13.93□□□□□ -0.18
CDH1-212ENST00000611625 SECISBP2LQ93073 1101 aaKnown RBP13.93□□□□□ -0.18
CDH1-212ENST00000611625 GPHNQ9NQX3 736 aaPredicted RBP13.93□□□□□ -0.18
CDH1-212ENST00000611625 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.93□□□□□ -0.18
CDH1-212ENST00000611625 TFCP2L1Q9NZI6 479 aa13.93□□□□□ -0.18
CDH1-212ENST00000611625 ADD2P35612 726 aa13.92□□□□□ -0.18
CDH1-212ENST00000611625 TNNC1P63316 161 aa13.92□□□□□ -0.18
CDH1-212ENST00000611625 SARM1Q6SZW1 724 aa13.92□□□□□ -0.18
CDH1-212ENST00000611625 KRT25Q7Z3Z0 450 aa13.92□□□□□ -0.18
CDH1-212ENST00000611625 CCDC65Q8IXS2 484 aa13.92□□□□□ -0.18
CDH1-212ENST00000611625 USP31Q70CQ4 1352 aa13.92□□□□□ -0.18
CDH1-212ENST00000611625 RAPGEF1Q13905 1077 aa13.92□□□□□ -0.18
CDH1-212ENST00000611625 SAMM50Q9Y512 469 aa13.92□□□□□ -0.18
CDH1-212ENST00000611625 ANKRD62A6NC57 917 aa13.92□□□□□ -0.18
CDH1-212ENST00000611625 TFAP4Q01664 338 aa13.92□□□□□ -0.18
CDH1-212ENST00000611625 OR8K1Q8NGG5 319 aa13.92□□□□□ -0.18
CDH1-212ENST00000611625 SMARCC2Q8TAQ2 1214 aa13.92□□□□□ -0.18
CDH1-212ENST00000611625 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.92□□□□□ -0.18
CDH1-212ENST00000611625 SPDYE3A6NKU9 549 aa13.92□□□□□ -0.18
CDH1-212ENST00000611625 TRAF1Q13077 416 aa13.92□□□□□ -0.18
CDH1-212ENST00000611625 ADGRL3Q9HAR2 1447 aa13.92□□□□□ -0.18
CDH1-212ENST00000611625 RPAP1Q9BWH6 1393 aaPredicted RBP13.92□□□□□ -0.18
CDH1-212ENST00000611625 TSPOAP1O95153 1857 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms