RNA–Protein interactions for RNA: ENST00000611614.4

COPS7B-223, Transcript of COP9 signalosome subunit 7B, humanhuman

TSL 3 BASIC

Gene COPS7B, Length 2,468 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7B-223ENST00000611614 PPIP5K2O43314 1243 aa16.04■□□□□ 0.16
COPS7B-223ENST00000611614 SLC3A2P08195 630 aaKnown RBP16.04■□□□□ 0.16
COPS7B-223ENST00000611614 CTDSPL2Q05D32 466 aa16.04■□□□□ 0.16
COPS7B-223ENST00000611614 GRIK5Q16478 980 aa16.04■□□□□ 0.16
COPS7B-223ENST00000611614 PYCARDQ9ULZ3 195 aa16.04■□□□□ 0.16
COPS7B-223ENST00000611614 PCDHA7Q9UN72 937 aa16.04■□□□□ 0.16
COPS7B-223ENST00000611614 A0A1W2PQ27 194 aa16.03■□□□□ 0.16
COPS7B-223ENST00000611614 A0A1W2PQ64 194 aa16.03■□□□□ 0.16
COPS7B-223ENST00000611614 A0A1W2PQD8 194 aa16.03■□□□□ 0.16
COPS7B-223ENST00000611614 B4E1Z4 1266 aa16.03■□□□□ 0.16
COPS7B-223ENST00000611614 ECE2O60344 883 aa16.03■□□□□ 0.16
COPS7B-223ENST00000611614 CDKL5O76039 1030 aa16.03■□□□□ 0.16
COPS7B-223ENST00000611614 METAP2P50579 478 aaKnown RBP eCLIP16.03■□□□□ 0.16
COPS7B-223ENST00000611614 PPP4CP60510 307 aa16.03■□□□□ 0.16
COPS7B-223ENST00000611614 SYCP1Q15431 976 aa16.03■□□□□ 0.16
COPS7B-223ENST00000611614 STX1AQ16623 288 aa16.03■□□□□ 0.16
COPS7B-223ENST00000611614 AOC3Q16853 763 aa16.03■□□□□ 0.16
COPS7B-223ENST00000611614 ADALQ6DHV7 355 aa16.03■□□□□ 0.16
COPS7B-223ENST00000611614 LINC00301Q8NCQ3 95 aa16.03■□□□□ 0.16
COPS7B-223ENST00000611614 NKX2-3Q8TAU0 364 aa16.03■□□□□ 0.16
COPS7B-223ENST00000611614 POLR3EQ9NVU0 708 aa16.03■□□□□ 0.16
COPS7B-223ENST00000611614 PSDA5PKW4 1024 aaPredicted RBP16.03■□□□□ 0.16
COPS7B-223ENST00000611614 YEATS4O95619 227 aa16.03■□□□□ 0.16
COPS7B-223ENST00000611614 NEDD4P46934 1319 aa16.03■□□□□ 0.16
COPS7B-223ENST00000611614 STK38Q15208 465 aa16.03■□□□□ 0.16
COPS7B-223ENST00000611614 MYSM1Q5VVJ2 828 aa16.03■□□□□ 0.16
COPS7B-223ENST00000611614 MAST2Q6P0Q8 1798 aa16.03■□□□□ 0.16
COPS7B-223ENST00000611614 SPC24Q8NBT2 197 aa16.03■□□□□ 0.16
COPS7B-223ENST00000611614 KCNG4Q8TDN1 519 aa16.03■□□□□ 0.16
COPS7B-223ENST00000611614 STAG1Q8WVM7 1258 aa16.03■□□□□ 0.16
COPS7B-223ENST00000611614 MRPS27Q92552 414 aaKnown RBP16.03■□□□□ 0.16
COPS7B-223ENST00000611614 ARPP21Q9UBL0 812 aaPredicted RBP16.03■□□□□ 0.16
COPS7B-223ENST00000611614 F8W031 263 aaPredicted RBP16.02■□□□□ 0.16
COPS7B-223ENST00000611614 CTIFO43310 598 aaKnown RBP16.02■□□□□ 0.16
COPS7B-223ENST00000611614 POLR3DP05423 398 aaPredicted RBP16.02■□□□□ 0.16
COPS7B-223ENST00000611614 KCNA3P22001 575 aa16.02■□□□□ 0.16
COPS7B-223ENST00000611614 BTDP43251 543 aa16.02■□□□□ 0.16
COPS7B-223ENST00000611614 KIF23Q02241 960 aaPredicted RBP16.02■□□□□ 0.16
COPS7B-223ENST00000611614 DALRD3Q5D0E6 543 aaKnown RBP16.02■□□□□ 0.16
COPS7B-223ENST00000611614 RRP12Q5JTH9 1297 aaKnown RBP16.02■□□□□ 0.16
COPS7B-223ENST00000611614 STRIP1Q5VSL9 837 aa16.02■□□□□ 0.16
COPS7B-223ENST00000611614 IGDCC4Q8TDY8 1250 aa16.02■□□□□ 0.16
COPS7B-223ENST00000611614 FAM163AQ96GL9 167 aaPredicted RBP16.02■□□□□ 0.16
COPS7B-223ENST00000611614 DCP1AQ9NPI6 582 aaPredicted RBP16.02■□□□□ 0.16
COPS7B-223ENST00000611614 TTF2Q9UNY4 1162 aaKnown RBP16.02■□□□□ 0.16
COPS7B-223ENST00000611614 CLIC4Q9Y696 253 aa16.02■□□□□ 0.16
COPS7B-223ENST00000611614 USP17L12C9JPN9 530 aa16.02■□□□□ 0.15
COPS7B-223ENST00000611614 USP17L21D6R901 530 aa16.02■□□□□ 0.15
COPS7B-223ENST00000611614 PCP11498 1178 aaKnown RBP16.02■□□□□ 0.15
COPS7B-223ENST00000611614 ZNF75DP51815 510 aa16.02■□□□□ 0.15
COPS7B-223ENST00000611614 DMTNQ08495 405 aa16.02■□□□□ 0.15
COPS7B-223ENST00000611614 SART3Q15020 963 aaKnown RBP16.02■□□□□ 0.15
COPS7B-223ENST00000611614 CPLX2Q6PUV4 134 aaKnown RBP16.02■□□□□ 0.15
COPS7B-223ENST00000611614 APOA5Q6Q788 366 aa16.02■□□□□ 0.15
COPS7B-223ENST00000611614 PLA2G4DQ86XP0 818 aa16.02■□□□□ 0.15
COPS7B-223ENST00000611614 ANKRD7Q92527 254 aa16.02■□□□□ 0.15
COPS7B-223ENST00000611614 PSMD1Q99460 953 aa16.02■□□□□ 0.15
COPS7B-223ENST00000611614 MCM9Q9NXL9 1143 aa16.02■□□□□ 0.15
COPS7B-223ENST00000611614 ANAPC4Q9UJX5 808 aa16.02■□□□□ 0.15
COPS7B-223ENST00000611614 GPR75-ASB3A0A0A6YYF3 556 aa16.01■□□□□ 0.15
COPS7B-223ENST00000611614 USP17L3A6NCW0 530 aa16.01■□□□□ 0.15
COPS7B-223ENST00000611614 USP17L4A6NCW7 530 aa16.01■□□□□ 0.15
COPS7B-223ENST00000611614 SF3A1Q15459 793 aaKnown RBP16.01■□□□□ 0.15
COPS7B-223ENST00000611614 SYNE3Q6ZMZ3 975 aa16.01■□□□□ 0.15
COPS7B-223ENST00000611614 USP17L1Q7RTZ2 530 aa16.01■□□□□ 0.15
COPS7B-223ENST00000611614 FMR1NBQ8N0W7 255 aaPredicted RBP16.01■□□□□ 0.15
COPS7B-223ENST00000611614 STK11IPQ8N1F8 1099 aa16.01■□□□□ 0.15
COPS7B-223ENST00000611614 ERICH2A1L162 156 aa16.01■□□□□ 0.15
COPS7B-223ENST00000611614 KIF28PB7ZC32 967 aa16.01■□□□□ 0.15
COPS7B-223ENST00000611614 RIOK3O14730 519 aaKnown RBP16.01■□□□□ 0.15
COPS7B-223ENST00000611614 IQCB1Q15051 598 aa16.01■□□□□ 0.15
COPS7B-223ENST00000611614 CTR9Q6PD62 1173 aa16.01■□□□□ 0.15
COPS7B-223ENST00000611614 SGMS1Q86VZ5 419 aa16.01■□□□□ 0.15
COPS7B-223ENST00000611614 PDCL2Q8N4E4 241 aa16.01■□□□□ 0.15
COPS7B-223ENST00000611614 SH3RF3Q8TEJ3 882 aaPredicted RBP16.01■□□□□ 0.15
COPS7B-223ENST00000611614 GTPBP4Q9BZE4 634 aaKnown RBP16.01■□□□□ 0.15
COPS7B-223ENST00000611614 TRIM5Q9C035 493 aa16.01■□□□□ 0.15
COPS7B-223ENST00000611614 LY9Q9HBG7 655 aa16.01■□□□□ 0.15
COPS7B-223ENST00000611614 GJB4Q9NTQ9 266 aa16.01■□□□□ 0.15
COPS7B-223ENST00000611614 CD2APQ9Y5K6 639 aa16.01■□□□□ 0.15
COPS7B-223ENST00000611614 SPTLC2O15270 562 aa16■□□□□ 0.15
COPS7B-223ENST00000611614 ZBTB43O43298 467 aa16■□□□□ 0.15
COPS7B-223ENST00000611614 TMEM67Q5HYA8 995 aa16■□□□□ 0.15
COPS7B-223ENST00000611614 NFXL1Q6ZNB6 911 aa16■□□□□ 0.15
COPS7B-223ENST00000611614 ESR2Q92731 530 aa16■□□□□ 0.15
COPS7B-223ENST00000611614 ALG1Q9BT22 464 aa16■□□□□ 0.15
COPS7B-223ENST00000611614 SENP2Q9HC62 589 aa16■□□□□ 0.15
COPS7B-223ENST00000611614 CDC27P30260 824 aa16■□□□□ 0.15
COPS7B-223ENST00000611614 CDC25BP30305 580 aa16■□□□□ 0.15
COPS7B-223ENST00000611614 LIFRP42702 1097 aa16■□□□□ 0.15
COPS7B-223ENST00000611614 FKBP1AP62942 108 aaKnown RBP16■□□□□ 0.15
COPS7B-223ENST00000611614 C11orf57Q6ZUT1 292 aaPredicted RBP16■□□□□ 0.15
COPS7B-223ENST00000611614 TEX11Q8IYF3 940 aa16■□□□□ 0.15
COPS7B-223ENST00000611614 LARGE2Q8N3Y3 721 aa16■□□□□ 0.15
COPS7B-223ENST00000611614 TGFBRAP1Q8WUH2 860 aa16■□□□□ 0.15
COPS7B-223ENST00000611614 ANO10Q9NW15 660 aa16■□□□□ 0.15
COPS7B-223ENST00000611614 PDE4BQ07343 736 aa15.99■□□□□ 0.15
COPS7B-223ENST00000611614 ANO1Q5XXA6 986 aa15.99■□□□□ 0.15
COPS7B-223ENST00000611614 CERS5Q8N5B7 392 aa15.99■□□□□ 0.15
COPS7B-223ENST00000611614 TEKT1Q969V4 418 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms