RNA–Protein interactions for RNA: ENST00000609445.5

SGMS1-209, Transcript of sphingomyelin synthase 1, humanhuman

TSL 4

Gene SGMS1, Length 594 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-209ENST00000609445 ZBTB40Q9NUA8 1239 aa19.49■□□□□ 0.71
SGMS1-209ENST00000609445 ZBTB21Q9ULJ3 1066 aa19.49■□□□□ 0.71
SGMS1-209ENST00000609445 DDX19BQ9UMR2 479 aa19.49■□□□□ 0.71
SGMS1-209ENST00000609445 UBXN2AP68543 259 aa19.48■□□□□ 0.71
SGMS1-209ENST00000609445 PABPC4Q13310 644 aaKnown RBP eCLIP19.48■□□□□ 0.71
SGMS1-209ENST00000609445 RPAP2Q8IXW5 612 aaPredicted RBP19.48■□□□□ 0.71
SGMS1-209ENST00000609445 RNF208Q9H0X6 261 aa19.48■□□□□ 0.71
SGMS1-209ENST00000609445 UNC93B1Q9H1C4 597 aa19.48■□□□□ 0.71
SGMS1-209ENST00000609445 RCAN3Q9UKA8 241 aa19.48■□□□□ 0.71
SGMS1-209ENST00000609445 TAOK2Q9UL54 1235 aa19.48■□□□□ 0.71
SGMS1-209ENST00000609445 CLASRPQ8N2M8 674 aaKnown RBP19.47■□□□□ 0.71
SGMS1-209ENST00000609445 KIF1BPQ96EK5 621 aa19.47■□□□□ 0.71
SGMS1-209ENST00000609445 NAV1Q8NEY1 1877 aa19.47■□□□□ 0.71
SGMS1-209ENST00000609445 DDX60LQ5H9U9 1706 aaKnown RBP19.46■□□□□ 0.71
SGMS1-209ENST00000609445 PEX10O60683 326 aa19.46■□□□□ 0.71
SGMS1-209ENST00000609445 HMMRO75330 724 aa19.46■□□□□ 0.71
SGMS1-209ENST00000609445 GJB1P08034 283 aa19.46■□□□□ 0.71
SGMS1-209ENST00000609445 GCLCP48506 637 aaPredicted RBP19.46■□□□□ 0.71
SGMS1-209ENST00000609445 COA7Q96BR5 231 aa19.46■□□□□ 0.71
SGMS1-209ENST00000609445 EDC3Q96F86 508 aaKnown RBP19.46■□□□□ 0.71
SGMS1-209ENST00000609445 RIOK1Q9BRS2 568 aaKnown RBP19.46■□□□□ 0.71
SGMS1-209ENST00000609445 TMOD4Q9NZQ9 345 aa19.46■□□□□ 0.71
SGMS1-209ENST00000609445 USP17L10C9JJH3 530 aa19.45■□□□□ 0.7
SGMS1-209ENST00000609445 GOLIM4O00461 696 aa19.45■□□□□ 0.7
SGMS1-209ENST00000609445 GH2P01242 217 aa19.45■□□□□ 0.7
SGMS1-209ENST00000609445 INHAP05111 366 aa19.45■□□□□ 0.7
SGMS1-209ENST00000609445 PDE6AP16499 860 aa19.45■□□□□ 0.7
SGMS1-209ENST00000609445 GJA8P48165 433 aa19.45■□□□□ 0.7
SGMS1-209ENST00000609445 IRX3P78415 501 aaPredicted RBP19.45■□□□□ 0.7
SGMS1-209ENST00000609445 IRF5Q13568 498 aa19.45■□□□□ 0.7
SGMS1-209ENST00000609445 C20orf194Q5TEA3 1177 aa19.45■□□□□ 0.7
SGMS1-209ENST00000609445 CERS3Q8IU89 383 aa19.45■□□□□ 0.7
SGMS1-209ENST00000609445 DNAJC2Q99543 621 aaKnown RBP19.45■□□□□ 0.7
SGMS1-209ENST00000609445 P2RX7Q99572 595 aaKnown RBP19.45■□□□□ 0.7
SGMS1-209ENST00000609445 GINM1Q9NU53 330 aa19.45■□□□□ 0.7
SGMS1-209ENST00000609445 PLXNB2O15031 1838 aa19.45■□□□□ 0.7
SGMS1-209ENST00000609445 MAGEB6P1A0A0J9YX57 407 aa19.44■□□□□ 0.7
SGMS1-209ENST00000609445 C19orf81C9J6K1 198 aa19.44■□□□□ 0.7
SGMS1-209ENST00000609445 IFIT2P09913 472 aaKnown RBP19.44■□□□□ 0.7
SGMS1-209ENST00000609445 HOXA7P31268 230 aaPredicted RBP19.44■□□□□ 0.7
SGMS1-209ENST00000609445 TTF1Q15361 905 aaPredicted RBP19.44■□□□□ 0.7
SGMS1-209ENST00000609445 SLC9C2Q5TAH2 1124 aa19.44■□□□□ 0.7
SGMS1-209ENST00000609445 TATDN1Q6P1N9 297 aa19.44■□□□□ 0.7
SGMS1-209ENST00000609445 NKX2-3Q8TAU0 364 aa19.44■□□□□ 0.7
SGMS1-209ENST00000609445 PXYLP1Q8TE99 480 aa19.44■□□□□ 0.7
SGMS1-209ENST00000609445 MORF4L1Q9UBU8 362 aa19.44■□□□□ 0.7
SGMS1-209ENST00000609445 RAB11FIP3O75154 756 aa19.43■□□□□ 0.7
SGMS1-209ENST00000609445 PLCD1P51178 756 aa19.43■□□□□ 0.7
SGMS1-209ENST00000609445 EVX2Q03828 476 aa19.43■□□□□ 0.7
SGMS1-209ENST00000609445 U2AF1L4Q8WU68 220 aaKnown RBP19.43■□□□□ 0.7
SGMS1-209ENST00000609445 GCC1Q96CN9 775 aa19.43■□□□□ 0.7
SGMS1-209ENST00000609445 EHD4Q9H223 541 aa19.43■□□□□ 0.7
SGMS1-209ENST00000609445 TXNRD2Q9NNW7 524 aa19.43■□□□□ 0.7
SGMS1-209ENST00000609445 EMILIN3Q9NT22 766 aa19.43■□□□□ 0.7
SGMS1-209ENST00000609445 SERPINB13Q9UIV8 391 aa19.43■□□□□ 0.7
SGMS1-209ENST00000609445 ZNF532Q9HCE3 1301 aa19.43■□□□□ 0.7
SGMS1-209ENST00000609445 HERVK_113P62684 666 aa19.42■□□□□ 0.7
SGMS1-209ENST00000609445 ZYXQ15942 572 aaKnown RBP19.42■□□□□ 0.7
SGMS1-209ENST00000609445 HABP4Q5JVS0 413 aaKnown RBP19.42■□□□□ 0.7
SGMS1-209ENST00000609445 TMED8Q6PL24 325 aaPredicted RBP19.42■□□□□ 0.7
SGMS1-209ENST00000609445 TTC6Q86TZ1 520 aa19.42■□□□□ 0.7
SGMS1-209ENST00000609445 PPIL4Q8WUA2 492 aaKnown RBP eCLIP19.42■□□□□ 0.7
SGMS1-209ENST00000609445 GJD2Q9UKL4 321 aa19.42■□□□□ 0.7
SGMS1-209ENST00000609445 TRIOBPQ9H2D6 2365 aa19.41■□□□□ 0.7
SGMS1-209ENST00000609445 TCRBV5S4A2TA0A5A2 114 aa19.41■□□□□ 0.7
SGMS1-209ENST00000609445 SLFNL1Q499Z3 407 aa19.41■□□□□ 0.7
SGMS1-209ENST00000609445 CERKLQ49MI3 558 aaPredicted RBP19.41■□□□□ 0.7
SGMS1-209ENST00000609445 USP17L2Q6R6M4 530 aa19.41■□□□□ 0.7
SGMS1-209ENST00000609445 UBE2Q1Q7Z7E8 422 aa19.41■□□□□ 0.7
SGMS1-209ENST00000609445 BOLA2Q9H3K6 86 aa19.41■□□□□ 0.7
SGMS1-209ENST00000609445 H0YGN5 161 aa19.4■□□□□ 0.7
SGMS1-209ENST00000609445 SGPL1O95470 568 aa19.4■□□□□ 0.7
SGMS1-209ENST00000609445 SHMT1P34896 483 aa19.4■□□□□ 0.7
SGMS1-209ENST00000609445 RAB3GAP1Q15042 981 aa19.4■□□□□ 0.7
SGMS1-209ENST00000609445 POTEEQ6S8J3 1075 aa19.4■□□□□ 0.7
SGMS1-209ENST00000609445 LCORLQ8N3X6 602 aa19.4■□□□□ 0.7
SGMS1-209ENST00000609445 SDR42E1Q8WUS8 393 aa19.4■□□□□ 0.7
SGMS1-209ENST00000609445 DEFB118Q96PH6 123 aa19.4■□□□□ 0.7
SGMS1-209ENST00000609445 FEZ1Q99689 392 aa19.4■□□□□ 0.7
SGMS1-209ENST00000609445 CRNKL1Q9BZJ0 848 aaKnown RBP19.4■□□□□ 0.7
SGMS1-209ENST00000609445 RBPJLQ9UBG7 517 aa19.4■□□□□ 0.7
SGMS1-209ENST00000609445 MYH7P12883 1935 aa19.4■□□□□ 0.7
SGMS1-209ENST00000609445 BAZ2AQ9UIF9 1905 aaKnown RBP19.39■□□□□ 0.7
SGMS1-209ENST00000609445 POLR3DP05423 398 aaPredicted RBP19.39■□□□□ 0.69
SGMS1-209ENST00000609445 CYP2D6P10635 497 aa19.39■□□□□ 0.69
SGMS1-209ENST00000609445 TRIM32Q13049 653 aa19.39■□□□□ 0.69
SGMS1-209ENST00000609445 ABCB5Q2M3G0 1257 aa19.39■□□□□ 0.69
SGMS1-209ENST00000609445 ACER1Q8TDN7 264 aa19.39■□□□□ 0.69
SGMS1-209ENST00000609445 DPF3Q92784 378 aa19.39■□□□□ 0.69
SGMS1-209ENST00000609445 PAGR1Q9BTK6 254 aa19.39■□□□□ 0.69
SGMS1-209ENST00000609445 CHMP4BQ9H444 224 aaKnown RBP19.39■□□□□ 0.69
SGMS1-209ENST00000609445 PAG1Q9NWQ8 432 aa19.39■□□□□ 0.69
SGMS1-209ENST00000609445 MCM9Q9NXL9 1143 aa19.39■□□□□ 0.69
SGMS1-209ENST00000609445 FARP2O94887 1054 aaPredicted RBP19.38■□□□□ 0.69
SGMS1-209ENST00000609445 CHGBP05060 677 aa19.38■□□□□ 0.69
SGMS1-209ENST00000609445 GUCY1A2P33402 732 aa19.38■□□□□ 0.69
SGMS1-209ENST00000609445 GABPAQ06546 454 aa19.38■□□□□ 0.69
SGMS1-209ENST00000609445 Q3C1V9 767 aa19.38■□□□□ 0.69
SGMS1-209ENST00000609445 GPRC5AQ8NFJ5 357 aa19.38■□□□□ 0.69
SGMS1-209ENST00000609445 C12orf42Q96LP6 360 aa19.38■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms