RNA–Protein interactions for RNA: ENST00000609107.1

LINC02538-201, Transcript of long intergenic non-protein coding RNA 2538, humanhuman

TSL 2 BASIC

Gene LINC02538, Length 4,569 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02538-201ENST00000609107 NAP1L4Q99733 375 aaKnown RBP16.12■□□□□ 0.17
LINC02538-201ENST00000609107 VPS16Q9H269 839 aa16.12■□□□□ 0.17
LINC02538-201ENST00000609107 TFCP2L1Q9NZI6 479 aa16.12■□□□□ 0.17
LINC02538-201ENST00000609107 SHTN1A0MZ66 631 aa16.11■□□□□ 0.17
LINC02538-201ENST00000609107 USP17L12C9JPN9 530 aa16.11■□□□□ 0.17
LINC02538-201ENST00000609107 USP17L21D6R901 530 aa16.11■□□□□ 0.17
LINC02538-201ENST00000609107 F8W031 263 aaPredicted RBP16.11■□□□□ 0.17
LINC02538-201ENST00000609107 PPP2R3AQ06190 1150 aa16.11■□□□□ 0.17
LINC02538-201ENST00000609107 SPAG5Q96R06 1193 aa16.11■□□□□ 0.17
LINC02538-201ENST00000609107 CHRNDQ07001 517 aa16.11■□□□□ 0.17
LINC02538-201ENST00000609107 SV2BQ7L1I2 683 aa16.11■□□□□ 0.17
LINC02538-201ENST00000609107 TMTC1Q8IUR5 882 aa16.11■□□□□ 0.17
LINC02538-201ENST00000609107 PLIN2Q99541 437 aa16.11■□□□□ 0.17
LINC02538-201ENST00000609107 CCNL1Q9UK58 526 aaPredicted RBP16.11■□□□□ 0.17
LINC02538-201ENST00000609107 SH2B2O14492 632 aaPredicted RBP16.11■□□□□ 0.17
LINC02538-201ENST00000609107 UBE4AQ14139 1066 aa16.11■□□□□ 0.17
LINC02538-201ENST00000609107 TMEM132AQ24JP5 1023 aa16.11■□□□□ 0.17
LINC02538-201ENST00000609107 RABL6Q3YEC7 729 aaPredicted RBP16.11■□□□□ 0.17
LINC02538-201ENST00000609107 CYP26C1Q6V0L0 522 aa16.11■□□□□ 0.17
LINC02538-201ENST00000609107 C11orf57Q6ZUT1 292 aaPredicted RBP16.11■□□□□ 0.17
LINC02538-201ENST00000609107 KRT25Q7Z3Z0 450 aa16.11■□□□□ 0.17
LINC02538-201ENST00000609107 ZHX1Q9UKY1 873 aaPredicted RBP16.11■□□□□ 0.17
LINC02538-201ENST00000609107 LMTK3Q96Q04 1460 aa16.1■□□□□ 0.17
LINC02538-201ENST00000609107 MCM6Q14566 821 aa16.1■□□□□ 0.17
LINC02538-201ENST00000609107 FTOQ9C0B1 505 aaKnown RBP eCLIP16.1■□□□□ 0.17
LINC02538-201ENST00000609107 LMAN1P49257 510 aa16.1■□□□□ 0.17
LINC02538-201ENST00000609107 RBM17Q96I25 401 aaKnown RBP16.1■□□□□ 0.17
LINC02538-201ENST00000609107 FOXP1Q9H334 677 aaPredicted RBP16.1■□□□□ 0.17
LINC02538-201ENST00000609107 MAP2P11137 1827 aaKnown RBP16.1■□□□□ 0.17
LINC02538-201ENST00000609107 IKBKBO14920 756 aa16.1■□□□□ 0.17
LINC02538-201ENST00000609107 FMNL1O95466 1100 aaPredicted RBP16.1■□□□□ 0.17
LINC02538-201ENST00000609107 NOP2P46087 812 aaKnown RBP16.1■□□□□ 0.17
LINC02538-201ENST00000609107 GYG1P46976 350 aa16.1■□□□□ 0.17
LINC02538-201ENST00000609107 TRMT44Q8IYL2 757 aaKnown RBP16.1■□□□□ 0.17
LINC02538-201ENST00000609107 PUF60Q9UHX1 559 aaKnown RBP16.1■□□□□ 0.17
LINC02538-201ENST00000609107 TFAP4Q01664 338 aa16.09■□□□□ 0.17
LINC02538-201ENST00000609107 PDE4DQ08499 809 aa16.09■□□□□ 0.17
LINC02538-201ENST00000609107 ELF2Q15723 593 aa16.09■□□□□ 0.17
LINC02538-201ENST00000609107 PI16Q6UXB8 463 aa16.09■□□□□ 0.17
LINC02538-201ENST00000609107 SDR42E1Q8WUS8 393 aa16.09■□□□□ 0.17
LINC02538-201ENST00000609107 ZNF622Q969S3 477 aaKnown RBP eCLIP16.09■□□□□ 0.17
LINC02538-201ENST00000609107 SAP30BPQ9UHR5 308 aaKnown RBP16.09■□□□□ 0.17
LINC02538-201ENST00000609107 NRBP1Q9UHY1 535 aa16.09■□□□□ 0.17
LINC02538-201ENST00000609107 WWC3Q9ULE0 1092 aa16.09■□□□□ 0.17
LINC02538-201ENST00000609107 TBC1D8BQ0IIM8 1120 aa16.09■□□□□ 0.17
LINC02538-201ENST00000609107 NONOQ15233 471 aaKnown RBP eCLIP16.09■□□□□ 0.17
LINC02538-201ENST00000609107 CNNM4Q6P4Q7 775 aa16.09■□□□□ 0.17
LINC02538-201ENST00000609107 NEK11Q8NG66 645 aa16.09■□□□□ 0.17
LINC02538-201ENST00000609107 TTLL11Q8NHH1 800 aa16.09■□□□□ 0.17
LINC02538-201ENST00000609107 CLIC6Q96NY7 704 aa16.09■□□□□ 0.17
LINC02538-201ENST00000609107 CARD6Q9BX69 1037 aa16.09■□□□□ 0.17
LINC02538-201ENST00000609107 hCG_1642624A0A1W2PR95 340 aa16.09■□□□□ 0.17
LINC02538-201ENST00000609107 DDAH1O94760 285 aa16.09■□□□□ 0.17
LINC02538-201ENST00000609107 UFL1O94874 794 aa16.09■□□□□ 0.17
LINC02538-201ENST00000609107 MRPL12P52815 198 aaKnown RBP16.09■□□□□ 0.17
LINC02538-201ENST00000609107 SETD1BQ9UPS6 1966 aaKnown RBP16.09■□□□□ 0.17
LINC02538-201ENST00000609107 PSDA5PKW4 1024 aaPredicted RBP16.09■□□□□ 0.17
LINC02538-201ENST00000609107 TMCO5BA8MYB1 307 aa16.09■□□□□ 0.17
LINC02538-201ENST00000609107 MATR3P43243 847 aaKnown RBP eCLIP16.09■□□□□ 0.17
LINC02538-201ENST00000609107 RNF26Q9BY78 433 aaPredicted RBP16.09■□□□□ 0.17
LINC02538-201ENST00000609107 RNF216Q9NWF9 866 aaPredicted RBP16.09■□□□□ 0.17
LINC02538-201ENST00000609107 LOC102724428A0A0B4J2F2 783 aa16.08■□□□□ 0.17
LINC02538-201ENST00000609107 U2AF2P26368 475 aaKnown RBP eCLIP16.08■□□□□ 0.17
LINC02538-201ENST00000609107 LIFRP42702 1097 aa16.08■□□□□ 0.17
LINC02538-201ENST00000609107 SIK1P57059 783 aa16.08■□□□□ 0.17
LINC02538-201ENST00000609107 PIGBQ92521 554 aa16.08■□□□□ 0.17
LINC02538-201ENST00000609107 CCDC51Q96ER9 411 aa16.08■□□□□ 0.17
LINC02538-201ENST00000609107 CCDC172P0C7W6 258 aa16.08■□□□□ 0.16
LINC02538-201ENST00000609107 IFNAR1P17181 557 aa16.08■□□□□ 0.16
LINC02538-201ENST00000609107 CCDC122Q5T0U0 273 aa16.08■□□□□ 0.16
LINC02538-201ENST00000609107 CMTR1Q8N1G2 835 aaKnown RBP16.08■□□□□ 0.16
LINC02538-201ENST00000609107 NAPGQ99747 312 aaPredicted RBP16.08■□□□□ 0.16
LINC02538-201ENST00000609107 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.08■□□□□ 0.16
LINC02538-201ENST00000609107 DIP2BQ9P265 1576 aa16.08■□□□□ 0.16
LINC02538-201ENST00000609107 ARID4AP29374 1257 aaPredicted RBP16.08■□□□□ 0.16
LINC02538-201ENST00000609107 DPCR1Q3MIW9 517 aa16.08■□□□□ 0.16
LINC02538-201ENST00000609107 NUP58Q9BVL2 599 aa16.08■□□□□ 0.16
LINC02538-201ENST00000609107 FANCLQ9NW38 375 aa16.08■□□□□ 0.16
LINC02538-201ENST00000609107 RPAP1Q9BWH6 1393 aaPredicted RBP16.08■□□□□ 0.16
LINC02538-201ENST00000609107 POTEJP0CG39 1038 aa16.07■□□□□ 0.16
LINC02538-201ENST00000609107 CSGALNACT2Q8N6G5 542 aa16.07■□□□□ 0.16
LINC02538-201ENST00000609107 CACTINQ8WUQ7 758 aaKnown RBP16.07■□□□□ 0.16
LINC02538-201ENST00000609107 NOC4LQ9BVI4 516 aaKnown RBP16.07■□□□□ 0.16
LINC02538-201ENST00000609107 GGA1Q9UJY5 639 aa16.07■□□□□ 0.16
LINC02538-201ENST00000609107 PCDHA5Q9Y5H7 936 aa16.07■□□□□ 0.16
LINC02538-201ENST00000609107 CRKLP46109 303 aaKnown RBP16.07■□□□□ 0.16
LINC02538-201ENST00000609107 SF3B2Q13435 895 aaKnown RBP16.07■□□□□ 0.16
LINC02538-201ENST00000609107 HLTFQ14527 1009 aaKnown RBP eCLIP16.07■□□□□ 0.16
LINC02538-201ENST00000609107 FAM47AQ5JRC9 791 aa16.07■□□□□ 0.16
LINC02538-201ENST00000609107 TSGA10Q9BZW7 698 aa16.07■□□□□ 0.16
LINC02538-201ENST00000609107 ZNF219Q9P2Y4 722 aaPredicted RBP16.07■□□□□ 0.16
LINC02538-201ENST00000609107 UBAP1LF5GYI3 381 aa16.07■□□□□ 0.16
LINC02538-201ENST00000609107 SEMA3EO15041 775 aa16.07■□□□□ 0.16
LINC02538-201ENST00000609107 WDR19Q8NEZ3 1342 aa16.07■□□□□ 0.16
LINC02538-201ENST00000609107 ETF1P62495 437 aaKnown RBP16.07■□□□□ 0.16
LINC02538-201ENST00000609107 SMARCC2Q8TAQ2 1214 aa16.07■□□□□ 0.16
LINC02538-201ENST00000609107 TSC1Q92574 1164 aa16.07■□□□□ 0.16
LINC02538-201ENST00000609107 SPDYE3A6NKU9 549 aa16.06■□□□□ 0.16
LINC02538-201ENST00000609107 KRT9P35527 623 aa16.06■□□□□ 0.16
LINC02538-201ENST00000609107 NELFBQ8WX92 580 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms