RNA–Protein interactions for RNA: ENST00000608158.5

CTCFL-215, Transcript of CCCTC-binding factor like, humanhuman

TSL 1 (best) BASIC

Gene CTCFL, Length 1,984 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-215ENST00000608158 VPS33BQ9H267 617 aa19.32■□□□□ 0.68
CTCFL-215ENST00000608158 ZSCAN16Q9H4T2 348 aaPredicted RBP19.32■□□□□ 0.68
CTCFL-215ENST00000608158 CCDC196A0A1B0GTZ2 297 aa19.31■□□□□ 0.68
CTCFL-215ENST00000608158 PSDA5PKW4 1024 aaPredicted RBP19.31■□□□□ 0.68
CTCFL-215ENST00000608158 RASA1P20936 1047 aa19.31■□□□□ 0.68
CTCFL-215ENST00000608158 IARSP41252 1262 aaKnown RBP19.31■□□□□ 0.68
CTCFL-215ENST00000608158 GUCY1B3Q02153 619 aa19.31■□□□□ 0.68
CTCFL-215ENST00000608158 FAM173BQ6P4H8 233 aa19.31■□□□□ 0.68
CTCFL-215ENST00000608158 GZF1Q9H116 711 aaPredicted RBP19.31■□□□□ 0.68
CTCFL-215ENST00000608158 PPP1R1BQ9UD71 204 aaPredicted RBP19.31■□□□□ 0.68
CTCFL-215ENST00000608158 SERPINA10Q9UK55 444 aa19.31■□□□□ 0.68
CTCFL-215ENST00000608158 KRT85P78386 507 aa19.3■□□□□ 0.68
CTCFL-215ENST00000608158 ILDR2Q71H61 639 aa19.3■□□□□ 0.68
CTCFL-215ENST00000608158 USP48Q86UV5 1035 aa19.3■□□□□ 0.68
CTCFL-215ENST00000608158 FANCBQ8NB91 859 aa19.3■□□□□ 0.68
CTCFL-215ENST00000608158 GPT2Q8TD30 523 aa19.3■□□□□ 0.68
CTCFL-215ENST00000608158 OSBPL5Q9H0X9 879 aaPredicted RBP19.3■□□□□ 0.68
CTCFL-215ENST00000608158 CD2APQ9Y5K6 639 aa19.3■□□□□ 0.68
CTCFL-215ENST00000608158 MYO3BQ8WXR4 1341 aa19.3■□□□□ 0.68
CTCFL-215ENST00000608158 MBD3O95983 291 aa19.3■□□□□ 0.68
CTCFL-215ENST00000608158 CDK8P49336 464 aa19.3■□□□□ 0.68
CTCFL-215ENST00000608158 TROAPQ12815 778 aa19.3■□□□□ 0.68
CTCFL-215ENST00000608158 PPP2R5BQ15173 497 aa19.3■□□□□ 0.68
CTCFL-215ENST00000608158 RCSD1Q6JBY9 416 aa19.3■□□□□ 0.68
CTCFL-215ENST00000608158 PCDHAC2Q9Y5I4 1007 aa19.3■□□□□ 0.68
CTCFL-215ENST00000608158 FMNL1O95466 1100 aaPredicted RBP19.29■□□□□ 0.68
CTCFL-215ENST00000608158 TSPY3P0CV98 308 aa19.29■□□□□ 0.68
CTCFL-215ENST00000608158 TSPY8P0CW00 308 aa19.29■□□□□ 0.68
CTCFL-215ENST00000608158 CALM1P0DP23 149 aa19.29■□□□□ 0.68
CTCFL-215ENST00000608158 CALM2P0DP24 149 aa19.29■□□□□ 0.68
CTCFL-215ENST00000608158 CALM3P0DP25 149 aa19.29■□□□□ 0.68
CTCFL-215ENST00000608158 PTGER2P43116 358 aa19.29■□□□□ 0.68
CTCFL-215ENST00000608158 CSPP1Q1MSJ5 1256 aa19.29■□□□□ 0.68
CTCFL-215ENST00000608158 TTC6Q86TZ1 520 aa19.29■□□□□ 0.68
CTCFL-215ENST00000608158 ZNF444Q8N0Y2 327 aaPredicted RBP19.29■□□□□ 0.68
CTCFL-215ENST00000608158 KLHL34Q8N239 644 aa19.29■□□□□ 0.68
CTCFL-215ENST00000608158 RGS22Q8NE09 1264 aa19.29■□□□□ 0.68
CTCFL-215ENST00000608158 FBXO18Q8NFZ0 1043 aa19.29■□□□□ 0.68
CTCFL-215ENST00000608158 ALG1Q9BT22 464 aa19.29■□□□□ 0.68
CTCFL-215ENST00000608158 SLC26A6Q9BXS9 759 aa19.29■□□□□ 0.68
CTCFL-215ENST00000608158 RBM5P52756 815 aaKnown RBP eCLIP19.28■□□□□ 0.68
CTCFL-215ENST00000608158 NFIAQ12857 509 aa19.28■□□□□ 0.68
CTCFL-215ENST00000608158 RSBN1LQ6PCB5 846 aaPredicted RBP19.28■□□□□ 0.68
CTCFL-215ENST00000608158 AIFM3Q96NN9 605 aa19.28■□□□□ 0.68
CTCFL-215ENST00000608158 IL17RBQ9NRM6 502 aa19.28■□□□□ 0.68
CTCFL-215ENST00000608158 TCP11L1Q9NUJ3 509 aa19.28■□□□□ 0.68
CTCFL-215ENST00000608158 GABPAQ06546 454 aa19.28■□□□□ 0.68
CTCFL-215ENST00000608158 SSRP1Q08945 709 aaKnown RBP19.28■□□□□ 0.68
CTCFL-215ENST00000608158 CCDC178Q5BJE1 867 aa19.28■□□□□ 0.68
CTCFL-215ENST00000608158 OTUD7BQ6GQQ9 843 aa19.28■□□□□ 0.68
CTCFL-215ENST00000608158 DGKHQ86XP1 1220 aa19.28■□□□□ 0.68
CTCFL-215ENST00000608158 NIM1KQ8IY84 436 aa19.28■□□□□ 0.68
CTCFL-215ENST00000608158 TAOK3Q9H2K8 898 aa19.28■□□□□ 0.68
CTCFL-215ENST00000608158 RBM28Q9NW13 759 aaKnown RBP19.28■□□□□ 0.68
CTCFL-215ENST00000608158 TCHHQ07283 1943 aa19.28■□□□□ 0.68
CTCFL-215ENST00000608158 FER1L6Q2WGJ9 1857 aa19.27■□□□□ 0.68
CTCFL-215ENST00000608158 RAD17O75943 681 aa19.27■□□□□ 0.68
CTCFL-215ENST00000608158 NBPF11Q86T75 865 aa19.27■□□□□ 0.68
CTCFL-215ENST00000608158 TRIM22Q8IYM9 498 aa19.27■□□□□ 0.68
CTCFL-215ENST00000608158 ANKS1AQ92625 1134 aa19.27■□□□□ 0.68
CTCFL-215ENST00000608158 GJB4Q9NTQ9 266 aa19.27■□□□□ 0.68
CTCFL-215ENST00000608158 PLIN4Q96Q06 1357 aa19.27■□□□□ 0.68
CTCFL-215ENST00000608158 PSMD14O00487 310 aa19.26■□□□□ 0.67
CTCFL-215ENST00000608158 GADD45BO75293 160 aaPredicted RBP19.26■□□□□ 0.67
CTCFL-215ENST00000608158 ZNRF3Q9ULT6 936 aa19.26■□□□□ 0.67
CTCFL-215ENST00000608158 NFKBIEO00221 500 aa19.26■□□□□ 0.67
CTCFL-215ENST00000608158 VIL1P09327 827 aaKnown RBP19.26■□□□□ 0.67
CTCFL-215ENST00000608158 CFAP100Q494V2 611 aa19.26■□□□□ 0.67
CTCFL-215ENST00000608158 CRACR2BQ8N4Y2 399 aaPredicted RBP19.26■□□□□ 0.67
CTCFL-215ENST00000608158 NEDD1Q8NHV4 660 aa19.26■□□□□ 0.67
CTCFL-215ENST00000608158 WASF1Q92558 559 aa19.26■□□□□ 0.67
CTCFL-215ENST00000608158 IDI2Q9BXS1 227 aa19.26■□□□□ 0.67
CTCFL-215ENST00000608158 KAT14Q9H8E8 782 aa19.26■□□□□ 0.67
CTCFL-215ENST00000608158 GOLGB1Q14789 3259 aaKnown RBP19.26■□□□□ 0.67
CTCFL-215ENST00000608158 ELP1O95163 1332 aa19.25■□□□□ 0.67
CTCFL-215ENST00000608158 UBE2Q2LH0YL09 131 aa19.25■□□□□ 0.67
CTCFL-215ENST00000608158 HLA-DOAP06340 250 aa19.25■□□□□ 0.67
CTCFL-215ENST00000608158 CACNB3P54284 484 aa19.25■□□□□ 0.67
CTCFL-215ENST00000608158 CAVIN1Q6NZI2 390 aaKnown RBP19.25■□□□□ 0.67
CTCFL-215ENST00000608158 TMTC3Q6ZXV5 915 aa19.25■□□□□ 0.67
CTCFL-215ENST00000608158 CMTR1Q8N1G2 835 aaKnown RBP19.25■□□□□ 0.67
CTCFL-215ENST00000608158 CTCFLQ8NI51 663 aaPredicted RBP19.25■□□□□ 0.67
CTCFL-215ENST00000608158 GMLQ99445 158 aa19.25■□□□□ 0.67
CTCFL-215ENST00000608158 SERPINB13Q9UIV8 391 aa19.25■□□□□ 0.67
CTCFL-215ENST00000608158 MYH15Q9Y2K3 1946 aa19.25■□□□□ 0.67
CTCFL-215ENST00000608158 PLEKHA8P1O95397 391 aa19.24■□□□□ 0.67
CTCFL-215ENST00000608158 UBE2HP62256 183 aa19.24■□□□□ 0.67
CTCFL-215ENST00000608158 RNF26Q9BY78 433 aaPredicted RBP19.24■□□□□ 0.67
CTCFL-215ENST00000608158 SCAND2PQ9GZW5 306 aaPredicted RBP19.24■□□□□ 0.67
CTCFL-215ENST00000608158 SWAP70Q9UH65 585 aa19.24■□□□□ 0.67
CTCFL-215ENST00000608158 NPM3O75607 178 aaKnown RBP19.24■□□□□ 0.67
CTCFL-215ENST00000608158 DEXIO95424 95 aa19.24■□□□□ 0.67
CTCFL-215ENST00000608158 GUCY1A2P33402 732 aa19.24■□□□□ 0.67
CTCFL-215ENST00000608158 KIF23Q02241 960 aaPredicted RBP19.24■□□□□ 0.67
CTCFL-215ENST00000608158 FUT2Q10981 343 aa19.24■□□□□ 0.67
CTCFL-215ENST00000608158 KRT40Q6A162 431 aa19.24■□□□□ 0.67
CTCFL-215ENST00000608158 PNMA1Q8ND90 353 aa19.24■□□□□ 0.67
CTCFL-215ENST00000608158 EHD4Q9H223 541 aa19.24■□□□□ 0.67
CTCFL-215ENST00000608158 FAM198AQ9UFP1 575 aa19.24■□□□□ 0.67
CTCFL-215ENST00000608158 BCS1LQ9Y276 419 aa19.24■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 243 ms