RNA–Protein interactions for RNA: ENST00000607482.5

CTSA-217, Transcript of cathepsin A, humanhuman

TSL 3

Gene CTSA, Length 403 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-217ENST00000607482 ADD2P35612 726 aa23.16■■□□□ 1.3
CTSA-217ENST00000607482 RAB3GAP1Q15042 981 aa23.16■■□□□ 1.3
CTSA-217ENST00000607482 TREML2Q5T2D2 321 aa23.16■■□□□ 1.3
CTSA-217ENST00000607482 LCORLQ8N3X6 602 aa23.16■■□□□ 1.3
CTSA-217ENST00000607482 FEZ1Q99689 392 aa23.16■■□□□ 1.3
CTSA-217ENST00000607482 WDR18Q9BV38 432 aa23.16■■□□□ 1.3
CTSA-217ENST00000607482 DNAJC18Q9H819 358 aa23.16■■□□□ 1.3
CTSA-217ENST00000607482 TCRBV5S4A2TA0A5A2 114 aa23.15■■□□□ 1.3
CTSA-217ENST00000607482 C19orf81C9J6K1 198 aa23.15■■□□□ 1.3
CTSA-217ENST00000607482 USP17L10C9JJH3 530 aa23.15■■□□□ 1.3
CTSA-217ENST00000607482 BACE1P56817 501 aa23.15■■□□□ 1.3
CTSA-217ENST00000607482 IRX3P78415 501 aaPredicted RBP23.15■■□□□ 1.3
CTSA-217ENST00000607482 ABCB5Q2M3G0 1257 aa23.15■■□□□ 1.3
CTSA-217ENST00000607482 SDR42E1Q8WUS8 393 aa23.15■■□□□ 1.3
CTSA-217ENST00000607482 MPHOSPH10O00566 681 aaKnown RBP23.14■■□□□ 1.29
CTSA-217ENST00000607482 MYCP01106 439 aaPredicted RBP23.14■■□□□ 1.29
CTSA-217ENST00000607482 UBE3CQ15386 1083 aa23.14■■□□□ 1.29
CTSA-217ENST00000607482 LRRFIP1Q32MZ4 808 aaKnown RBP23.14■■□□□ 1.29
CTSA-217ENST00000607482 ANKRD13CQ8N6S4 541 aa23.14■■□□□ 1.29
CTSA-217ENST00000607482 TRIM47Q96LD4 638 aa23.14■■□□□ 1.29
CTSA-217ENST00000607482 BIN2Q9UBW5 565 aaPredicted RBP23.14■■□□□ 1.29
CTSA-217ENST00000607482 FOCADQ5VW36 1801 aa23.13■■□□□ 1.29
CTSA-217ENST00000607482 ERC2O15083 957 aa23.13■■□□□ 1.29
CTSA-217ENST00000607482 BCRP11274 1271 aa23.13■■□□□ 1.29
CTSA-217ENST00000607482 GCLCP48506 637 aaPredicted RBP23.13■■□□□ 1.29
CTSA-217ENST00000607482 PLCD1P51178 756 aa23.13■■□□□ 1.29
CTSA-217ENST00000607482 CAP1Q01518 475 aa23.13■■□□□ 1.29
CTSA-217ENST00000607482 ARMC5Q96C12 935 aa23.13■■□□□ 1.29
CTSA-217ENST00000607482 ATP8A2Q9NTI2 1148 aa23.13■■□□□ 1.29
CTSA-217ENST00000607482 SRRDQ9UH36 339 aa23.13■■□□□ 1.29
CTSA-217ENST00000607482 MYH1P12882 1939 aa23.13■■□□□ 1.29
CTSA-217ENST00000607482 CDK5RAP2Q96SN8 1893 aa23.13■■□□□ 1.29
CTSA-217ENST00000607482 MYPNQ86TC9 1320 aa23.12■■□□□ 1.29
CTSA-217ENST00000607482 ADGRA2Q96PE1 1338 aa23.12■■□□□ 1.29
CTSA-217ENST00000607482 TNPO2O14787 897 aaKnown RBP23.12■■□□□ 1.29
CTSA-217ENST00000607482 TSHZ3Q63HK5 1081 aa23.12■■□□□ 1.29
CTSA-217ENST00000607482 TATDN1Q6P1N9 297 aa23.12■■□□□ 1.29
CTSA-217ENST00000607482 DCP1AQ9NPI6 582 aaPredicted RBP23.12■■□□□ 1.29
CTSA-217ENST00000607482 SLC4A4Q9Y6R1 1079 aa23.12■■□□□ 1.29
CTSA-217ENST00000607482 ATAD5Q96QE3 1844 aa23.12■■□□□ 1.29
CTSA-217ENST00000607482 JAG1P78504 1218 aa23.11■■□□□ 1.29
CTSA-217ENST00000607482 ZYXQ15942 572 aaKnown RBP23.11■■□□□ 1.29
CTSA-217ENST00000607482 SLFNL1Q499Z3 407 aa23.11■■□□□ 1.29
CTSA-217ENST00000607482 SH3D19Q5HYK7 790 aa23.11■■□□□ 1.29
CTSA-217ENST00000607482 USP17L2Q6R6M4 530 aa23.11■■□□□ 1.29
CTSA-217ENST00000607482 SH3TC2Q8TF17 1288 aa23.11■■□□□ 1.29
CTSA-217ENST00000607482 ASCC2Q9H1I8 757 aaPredicted RBP23.11■■□□□ 1.29
CTSA-217ENST00000607482 TAOK2Q9UL54 1235 aa23.11■■□□□ 1.29
CTSA-217ENST00000607482 SHROOM1Q2M3G4 852 aaPredicted RBP23.1■■□□□ 1.29
CTSA-217ENST00000607482 ANKRD45Q5TZF3 282 aa23.1■■□□□ 1.29
CTSA-217ENST00000607482 CCAR1Q8IX12 1150 aaKnown RBP23.1■■□□□ 1.29
CTSA-217ENST00000607482 COA7Q96BR5 231 aa23.1■■□□□ 1.29
CTSA-217ENST00000607482 PRKAB2O43741 272 aa23.09■■□□□ 1.29
CTSA-217ENST00000607482 USP14P54578 494 aa23.09■■□□□ 1.29
CTSA-217ENST00000607482 KBTBD3Q8NAB2 608 aa23.09■■□□□ 1.29
CTSA-217ENST00000607482 SWAP70Q9UH65 585 aa23.09■■□□□ 1.29
CTSA-217ENST00000607482 PHIPQ8WWQ0 1821 aa23.09■■□□□ 1.29
CTSA-217ENST00000607482 TTC41PQ6P2S7 1318 aa23.08■■□□□ 1.29
CTSA-217ENST00000607482 ZFYP08048 801 aaPredicted RBP23.08■■□□□ 1.29
CTSA-217ENST00000607482 SHMT1P34896 483 aa23.08■■□□□ 1.29
CTSA-217ENST00000607482 FAM110CQ1W6H9 321 aa23.08■■□□□ 1.29
CTSA-217ENST00000607482 ZNF333Q96JL9 665 aa23.08■■□□□ 1.29
CTSA-217ENST00000607482 GLRX3O76003 335 aaKnown RBP23.07■■□□□ 1.28
CTSA-217ENST00000607482 CYP2D6P10635 497 aa23.07■■□□□ 1.28
CTSA-217ENST00000607482 CTGFP29279 349 aa23.07■■□□□ 1.28
CTSA-217ENST00000607482 GRK4P32298 578 aa23.07■■□□□ 1.28
CTSA-217ENST00000607482 PRKCZQ05513 592 aa23.07■■□□□ 1.28
CTSA-217ENST00000607482 AAMPQ13685 434 aa23.07■■□□□ 1.28
CTSA-217ENST00000607482 GCC1Q96CN9 775 aa23.07■■□□□ 1.28
CTSA-217ENST00000607482 CWC22Q9HCG8 908 aaKnown RBP23.07■■□□□ 1.28
CTSA-217ENST00000607482 SIPA1L1O43166 1804 aa23.07■■□□□ 1.28
CTSA-217ENST00000607482 PTPRFP10586 1907 aa23.06■■□□□ 1.28
CTSA-217ENST00000607482 RNF113AO15541 343 aaKnown RBP23.06■■□□□ 1.28
CTSA-217ENST00000607482 APPP05067 770 aa23.06■■□□□ 1.28
CTSA-217ENST00000607482 MX1P20591 662 aa23.06■■□□□ 1.28
CTSA-217ENST00000607482 PUS7LQ9H0K6 701 aaKnown RBP23.06■■□□□ 1.28
CTSA-217ENST00000607482 NAV1Q8NEY1 1877 aa23.06■■□□□ 1.28
CTSA-217ENST00000607482 POTEFA5A3E0 1075 aa23.05■■□□□ 1.28
CTSA-217ENST00000607482 USP17L12C9JPN9 530 aa23.05■■□□□ 1.28
CTSA-217ENST00000607482 USP17L21D6R901 530 aa23.05■■□□□ 1.28
CTSA-217ENST00000607482 CHGBP05060 677 aa23.05■■□□□ 1.28
CTSA-217ENST00000607482 HOXA7P31268 230 aaPredicted RBP23.05■■□□□ 1.28
CTSA-217ENST00000607482 UBXN2AP68543 259 aa23.05■■□□□ 1.28
CTSA-217ENST00000607482 DYNLL2Q96FJ2 89 aa23.05■■□□□ 1.28
CTSA-217ENST00000607482 P2RX7Q99572 595 aaKnown RBP23.05■■□□□ 1.28
CTSA-217ENST00000607482 FSD1Q9BTV5 496 aa23.05■■□□□ 1.28
CTSA-217ENST00000607482 SEPT2Q15019 361 aa23.04■■□□□ 1.28
CTSA-217ENST00000607482 SLAIN1Q8ND83 568 aa23.04■■□□□ 1.28
CTSA-217ENST00000607482 GPRC5AQ8NFJ5 357 aa23.04■■□□□ 1.28
CTSA-217ENST00000607482 GTF3C2Q8WUA4 911 aaPredicted RBP23.04■■□□□ 1.28
CTSA-217ENST00000607482 APPBP2Q92624 585 aa23.04■■□□□ 1.28
CTSA-217ENST00000607482 RWDD1Q9H446 243 aaPredicted RBP23.04■■□□□ 1.28
CTSA-217ENST00000607482 EMILIN3Q9NT22 766 aa23.04■■□□□ 1.28
CTSA-217ENST00000607482 HTTP42858 3142 aa23.04■■□□□ 1.28
CTSA-217ENST00000607482 USP17L15C9J2P7 530 aa23.03■■□□□ 1.28
CTSA-217ENST00000607482 USP17L13C9JLJ4 530 aa23.03■■□□□ 1.28
CTSA-217ENST00000607482 USP17L11C9JVI0 530 aa23.03■■□□□ 1.28
CTSA-217ENST00000607482 USP17L18D6R9N7 530 aa23.03■■□□□ 1.28
CTSA-217ENST00000607482 USP17L22D6RA61 530 aa23.03■■□□□ 1.28
CTSA-217ENST00000607482 USP17L17D6RBQ6 530 aa23.03■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms