RNA–Protein interactions for RNA: ENST00000607039.1

CTTNBP2NL-204, Transcript of CTTNBP2 N-terminal like, humanhuman

TSL 1 (best)

Gene CTTNBP2NL, Length 1,459 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTTNBP2NL-204ENST00000607039 RFX7Q2KHR2 1363 aa9.35□□□□□ -0.91
CTTNBP2NL-204ENST00000607039 TIMM10P62072 90 aa9.34□□□□□ -0.91
CTTNBP2NL-204ENST00000607039 DZIP1Q86YF9 867 aaKnown RBP9.34□□□□□ -0.91
CTTNBP2NL-204ENST00000607039 ZSCAN29Q8IWY8 852 aaPredicted RBP9.34□□□□□ -0.91
CTTNBP2NL-204ENST00000607039 FAM163AQ96GL9 167 aaPredicted RBP9.34□□□□□ -0.91
CTTNBP2NL-204ENST00000607039 C1orf115Q9H7X2 142 aa9.34□□□□□ -0.91
CTTNBP2NL-204ENST00000607039 DDX4Q9NQI0 724 aaKnown RBP9.34□□□□□ -0.91
CTTNBP2NL-204ENST00000607039 GPHNQ9NQX3 736 aaPredicted RBP9.34□□□□□ -0.91
CTTNBP2NL-204ENST00000607039 GABRQQ9UN88 632 aa9.34□□□□□ -0.91
CTTNBP2NL-204ENST00000607039 ZSWIM8A7E2V4 1837 aa9.34□□□□□ -0.91
CTTNBP2NL-204ENST00000607039 TRIM75PA6NK02 468 aa9.34□□□□□ -0.91
CTTNBP2NL-204ENST00000607039 DPYSL4O14531 572 aa9.34□□□□□ -0.91
CTTNBP2NL-204ENST00000607039 TRIM66O15016 1216 aa9.34□□□□□ -0.91
CTTNBP2NL-204ENST00000607039 CTNND1O60716 968 aaKnown RBP9.34□□□□□ -0.91
CTTNBP2NL-204ENST00000607039 BTDP43251 543 aa9.34□□□□□ -0.91
CTTNBP2NL-204ENST00000607039 UBXN2AP68543 259 aa9.34□□□□□ -0.91
CTTNBP2NL-204ENST00000607039 GADL1Q6ZQY3 521 aa9.34□□□□□ -0.91
CTTNBP2NL-204ENST00000607039 SLF2Q8IX21 1173 aa9.34□□□□□ -0.91
CTTNBP2NL-204ENST00000607039 SLAIN1Q8ND83 568 aa9.34□□□□□ -0.91
CTTNBP2NL-204ENST00000607039 MEIS3Q99687 375 aa9.34□□□□□ -0.91
CTTNBP2NL-204ENST00000607039 UNC93B1Q9H1C4 597 aa9.34□□□□□ -0.91
CTTNBP2NL-204ENST00000607039 EMILIN3Q9NT22 766 aa9.34□□□□□ -0.91
CTTNBP2NL-204ENST00000607039 RBM27Q9P2N5 1060 aaKnown RBP9.34□□□□□ -0.91
CTTNBP2NL-204ENST00000607039 FRMD4AQ9P2Q2 1039 aaPredicted RBP9.34□□□□□ -0.91
CTTNBP2NL-204ENST00000607039 ABCF2Q9UG63 623 aa9.34□□□□□ -0.91
CTTNBP2NL-204ENST00000607039 HDAC5Q9UQL6 1122 aa9.34□□□□□ -0.91
CTTNBP2NL-204ENST00000607039 SLC45A1Q9Y2W3 748 aa9.34□□□□□ -0.91
CTTNBP2NL-204ENST00000607039 PDS5AQ29RF7 1337 aaKnown RBP9.33□□□□□ -0.92
CTTNBP2NL-204ENST00000607039 A0A1B0GUL7 405 aa9.33□□□□□ -0.92
CTTNBP2NL-204ENST00000607039 FLT3LGP49771 235 aa9.33□□□□□ -0.92
CTTNBP2NL-204ENST00000607039 RHBDL3P58872 404 aa9.33□□□□□ -0.92
CTTNBP2NL-204ENST00000607039 MECOMQ03112 1051 aa9.33□□□□□ -0.92
CTTNBP2NL-204ENST00000607039 PICALMQ13492 652 aa9.33□□□□□ -0.92
CTTNBP2NL-204ENST00000607039 SPTY2D1Q68D10 685 aaPredicted RBP9.33□□□□□ -0.92
CTTNBP2NL-204ENST00000607039 CCDC84Q86UT8 332 aaPredicted RBP9.33□□□□□ -0.92
CTTNBP2NL-204ENST00000607039 SMCR8Q8TEV9 937 aaPredicted RBP9.33□□□□□ -0.92
CTTNBP2NL-204ENST00000607039 U2AF1L4Q8WU68 220 aaKnown RBP9.33□□□□□ -0.92
CTTNBP2NL-204ENST00000607039 XAGE2Q96GT9 111 aa9.33□□□□□ -0.92
CTTNBP2NL-204ENST00000607039 HTATIP2Q9BUP3 242 aa9.33□□□□□ -0.92
CTTNBP2NL-204ENST00000607039 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP9.33□□□□□ -0.92
CTTNBP2NL-204ENST00000607039 MROH7-TTC4A0A0A0MT08 1334 aa9.32□□□□□ -0.92
CTTNBP2NL-204ENST00000607039 GPR75-ASB3A0A0A6YYF3 556 aa9.32□□□□□ -0.92
CTTNBP2NL-204ENST00000607039 TNPO2O14787 897 aaKnown RBP9.32□□□□□ -0.92
CTTNBP2NL-204ENST00000607039 ADCY3O60266 1144 aa9.32□□□□□ -0.92
CTTNBP2NL-204ENST00000607039 TBC1D12O60347 775 aa9.32□□□□□ -0.92
CTTNBP2NL-204ENST00000607039 FARP2O94887 1054 aaPredicted RBP9.32□□□□□ -0.92
CTTNBP2NL-204ENST00000607039 INHAP05111 366 aa9.32□□□□□ -0.92
CTTNBP2NL-204ENST00000607039 ELNP15502 786 aa9.32□□□□□ -0.92
CTTNBP2NL-204ENST00000607039 PDE4DQ08499 809 aa9.32□□□□□ -0.92
CTTNBP2NL-204ENST00000607039 TFCP2Q12800 502 aa9.32□□□□□ -0.92
CTTNBP2NL-204ENST00000607039 SMC5Q8IY18 1101 aa9.32□□□□□ -0.92
CTTNBP2NL-204ENST00000607039 ANKRD13CQ8N6S4 541 aa9.32□□□□□ -0.92
CTTNBP2NL-204ENST00000607039 PXYLP1Q8TE99 480 aa9.32□□□□□ -0.92
CTTNBP2NL-204ENST00000607039 ZNF384Q8TF68 577 aa9.32□□□□□ -0.92
CTTNBP2NL-204ENST00000607039 AGTPBP1Q9UPW5 1226 aa9.32□□□□□ -0.92
CTTNBP2NL-204ENST00000607039 FAM196BA6NMK8 535 aa9.31□□□□□ -0.92
CTTNBP2NL-204ENST00000607039 SRGAP3O43295 1099 aa9.31□□□□□ -0.92
CTTNBP2NL-204ENST00000607039 SGPL1O95470 568 aa9.31□□□□□ -0.92
CTTNBP2NL-204ENST00000607039 IRF5Q13568 498 aa9.31□□□□□ -0.92
CTTNBP2NL-204ENST00000607039 TREML2Q5T2D2 321 aa9.31□□□□□ -0.92
CTTNBP2NL-204ENST00000607039 PI16Q6UXB8 463 aa9.31□□□□□ -0.92
CTTNBP2NL-204ENST00000607039 BACH2Q9BYV9 841 aa9.31□□□□□ -0.92
CTTNBP2NL-204ENST00000607039 PRO3102Q9H379 93 aa9.31□□□□□ -0.92
CTTNBP2NL-204ENST00000607039 XPO5Q9HAV4 1204 aaKnown RBP eCLIP9.31□□□□□ -0.92
CTTNBP2NL-204ENST00000607039 HMG20BQ9P0W2 317 aa9.31□□□□□ -0.92
CTTNBP2NL-204ENST00000607039 AKAP2Q9Y2D5 859 aa9.31□□□□□ -0.92
CTTNBP2NL-204ENST00000607039 RANBP2P49792 3224 aaKnown RBP9.3□□□□□ -0.92
CTTNBP2NL-204ENST00000607039 SPP2Q13103 211 aa9.3□□□□□ -0.92
CTTNBP2NL-204ENST00000607039 MTX1Q13505 466 aa9.3□□□□□ -0.92
CTTNBP2NL-204ENST00000607039 TBC1D9Q6ZT07 1266 aa9.3□□□□□ -0.92
CTTNBP2NL-204ENST00000607039 SPATA5Q8NB90 893 aa9.3□□□□□ -0.92
CTTNBP2NL-204ENST00000607039 NSUN4Q96CB9 384 aaKnown RBP9.3□□□□□ -0.92
CTTNBP2NL-204ENST00000607039 NEUROD6Q96NK8 337 aa9.3□□□□□ -0.92
CTTNBP2NL-204ENST00000607039 DEFB118Q96PH6 123 aa9.3□□□□□ -0.92
CTTNBP2NL-204ENST00000607039 OCEL1Q9H607 264 aa9.3□□□□□ -0.92
CTTNBP2NL-204ENST00000607039 PAK6Q9NQU5 681 aaPredicted RBP9.3□□□□□ -0.92
CTTNBP2NL-204ENST00000607039 SZT2Q5T011 3432 aa9.3□□□□□ -0.92
CTTNBP2NL-204ENST00000607039 TFRCP02786 760 aaKnown RBP9.29□□□□□ -0.92
CTTNBP2NL-204ENST00000607039 GNAI3P08754 354 aa9.29□□□□□ -0.92
CTTNBP2NL-204ENST00000607039 GSTO1P78417 241 aa9.29□□□□□ -0.92
CTTNBP2NL-204ENST00000607039 DSG2Q14126 1118 aa9.29□□□□□ -0.92
CTTNBP2NL-204ENST00000607039 RRP1BQ14684 758 aaKnown RBP9.29□□□□□ -0.92
CTTNBP2NL-204ENST00000607039 FAM110CQ1W6H9 321 aa9.29□□□□□ -0.92
CTTNBP2NL-204ENST00000607039 SIRT2Q8IXJ6 389 aa9.29□□□□□ -0.92
CTTNBP2NL-204ENST00000607039 RPAP2Q8IXW5 612 aaPredicted RBP9.29□□□□□ -0.92
CTTNBP2NL-204ENST00000607039 PROCA1Q8NCQ7 364 aaPredicted RBP9.29□□□□□ -0.92
CTTNBP2NL-204ENST00000607039 COA7Q96BR5 231 aa9.29□□□□□ -0.92
CTTNBP2NL-204ENST00000607039 OSBPL5Q9H0X9 879 aaPredicted RBP9.29□□□□□ -0.92
CTTNBP2NL-204ENST00000607039 PNMA3Q9UL41 463 aa9.29□□□□□ -0.92
CTTNBP2NL-204ENST00000607039 NR2E3Q9Y5X4 410 aa9.29□□□□□ -0.92
CTTNBP2NL-204ENST00000607039 EVI5O60447 810 aa9.28□□□□□ -0.92
CTTNBP2NL-204ENST00000607039 MAP4K4O95819 1239 aaPredicted RBP9.28□□□□□ -0.92
CTTNBP2NL-204ENST00000607039 GNAI2P04899 355 aa9.28□□□□□ -0.92
CTTNBP2NL-204ENST00000607039 LDHCP07864 332 aa9.28□□□□□ -0.92
CTTNBP2NL-204ENST00000607039 CAPN2P17655 700 aa9.28□□□□□ -0.92
CTTNBP2NL-204ENST00000607039 ARID4AP29374 1257 aaPredicted RBP9.28□□□□□ -0.92
CTTNBP2NL-204ENST00000607039 CAP2P40123 477 aa9.28□□□□□ -0.92
CTTNBP2NL-204ENST00000607039 HMGCS2P54868 508 aa9.28□□□□□ -0.92
CTTNBP2NL-204ENST00000607039 NUCB1Q02818 461 aa9.28□□□□□ -0.92
CTTNBP2NL-204ENST00000607039 CEP85Q6P2H3 762 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms