RNA–Protein interactions for RNA: ENST00000606782.1

CTSA-213, Transcript of cathepsin A, humanhuman

TSL 3

Gene CTSA, Length 582 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-213ENST00000606782 PRKCZQ05513 592 aa16.2■□□□□ 0.18
CTSA-213ENST00000606782 IRF5Q13568 498 aa16.2■□□□□ 0.18
CTSA-213ENST00000606782 CRACR2BQ8N4Y2 399 aaPredicted RBP16.2■□□□□ 0.18
CTSA-213ENST00000606782 SMCR8Q8TEV9 937 aaPredicted RBP16.2■□□□□ 0.18
CTSA-213ENST00000606782 SAP30BPQ9UHR5 308 aaKnown RBP16.2■□□□□ 0.18
CTSA-213ENST00000606782 MYH1P12882 1939 aa16.19■□□□□ 0.18
CTSA-213ENST00000606782 DOCK3Q8IZD9 2030 aa16.19■□□□□ 0.18
CTSA-213ENST00000606782 SLC34A2O95436 690 aa16.19■□□□□ 0.18
CTSA-213ENST00000606782 NEFLP07196 543 aa16.19■□□□□ 0.18
CTSA-213ENST00000606782 IFIT2P09913 472 aaKnown RBP16.19■□□□□ 0.18
CTSA-213ENST00000606782 PDE6AP16499 860 aa16.19■□□□□ 0.18
CTSA-213ENST00000606782 SLC4A8Q2Y0W8 1093 aa16.19■□□□□ 0.18
CTSA-213ENST00000606782 ASCC2Q9H1I8 757 aaPredicted RBP16.19■□□□□ 0.18
CTSA-213ENST00000606782 SERPINB13Q9UIV8 391 aa16.19■□□□□ 0.18
CTSA-213ENST00000606782 ZBTB21Q9ULJ3 1066 aa16.19■□□□□ 0.18
CTSA-213ENST00000606782 GABRQQ9UN88 632 aa16.19■□□□□ 0.18
CTSA-213ENST00000606782 TCRBV5S4A2TA0A5A2 114 aa16.18■□□□□ 0.18
CTSA-213ENST00000606782 USP17L10C9JJH3 530 aa16.18■□□□□ 0.18
CTSA-213ENST00000606782 ATP5JP18859 108 aa16.18■□□□□ 0.18
CTSA-213ENST00000606782 USP5P45974 858 aa16.18■□□□□ 0.18
CTSA-213ENST00000606782 MTFR1Q15390 333 aa16.18■□□□□ 0.18
CTSA-213ENST00000606782 SLC9C2Q5TAH2 1124 aa16.18■□□□□ 0.18
CTSA-213ENST00000606782 ERICH6BQ5W0A0 696 aa16.18■□□□□ 0.18
CTSA-213ENST00000606782 TTC6Q86TZ1 520 aa16.18■□□□□ 0.18
CTSA-213ENST00000606782 ANKRD13CQ8N6S4 541 aa16.18■□□□□ 0.18
CTSA-213ENST00000606782 SLAIN1Q8ND83 568 aa16.18■□□□□ 0.18
CTSA-213ENST00000606782 PXYLP1Q8TE99 480 aa16.18■□□□□ 0.18
CTSA-213ENST00000606782 TRIM34Q9BYJ4 488 aa16.18■□□□□ 0.18
CTSA-213ENST00000606782 MORF4L1Q9UBU8 362 aa16.18■□□□□ 0.18
CTSA-213ENST00000606782 BRCA2P51587 3418 aa16.17■□□□□ 0.18
CTSA-213ENST00000606782 CEP290O15078 2479 aa16.17■□□□□ 0.18
CTSA-213ENST00000606782 MAGEB6P1A0A0J9YX57 407 aa16.17■□□□□ 0.18
CTSA-213ENST00000606782 ECM2O94769 699 aaPredicted RBP16.17■□□□□ 0.18
CTSA-213ENST00000606782 FLT3LGP49771 235 aa16.17■□□□□ 0.18
CTSA-213ENST00000606782 HDAC1Q13547 482 aaPredicted RBP16.17■□□□□ 0.18
CTSA-213ENST00000606782 MTMR2Q13614 643 aa16.17■□□□□ 0.18
CTSA-213ENST00000606782 SHROOM1Q2M3G4 852 aaPredicted RBP16.17■□□□□ 0.18
CTSA-213ENST00000606782 DCTPP1Q9H773 170 aa16.17■□□□□ 0.18
CTSA-213ENST00000606782 TAOK2Q9UL54 1235 aa16.17■□□□□ 0.18
CTSA-213ENST00000606782 MKI67P46013 3256 aaKnown RBP16.16■□□□□ 0.18
CTSA-213ENST00000606782 APBB1O00213 710 aa16.16■□□□□ 0.18
CTSA-213ENST00000606782 GOLIM4O00461 696 aa16.16■□□□□ 0.18
CTSA-213ENST00000606782 TNPO2O14787 897 aaKnown RBP16.16■□□□□ 0.18
CTSA-213ENST00000606782 ADCY3O60266 1144 aa16.16■□□□□ 0.18
CTSA-213ENST00000606782 GDF11O95390 407 aa16.16■□□□□ 0.18
CTSA-213ENST00000606782 GJB1P08034 283 aa16.16■□□□□ 0.18
CTSA-213ENST00000606782 GABPAQ06546 454 aa16.16■□□□□ 0.18
CTSA-213ENST00000606782 NKX2-3Q8TAU0 364 aa16.16■□□□□ 0.18
CTSA-213ENST00000606782 TMOD4Q9NZQ9 345 aa16.16■□□□□ 0.18
CTSA-213ENST00000606782 ZNF532Q9HCE3 1301 aa16.16■□□□□ 0.18
CTSA-213ENST00000606782 GH2P01242 217 aa16.15■□□□□ 0.18
CTSA-213ENST00000606782 CAPN2P17655 700 aa16.15■□□□□ 0.18
CTSA-213ENST00000606782 GJA8P48165 433 aa16.15■□□□□ 0.18
CTSA-213ENST00000606782 PLCD1P51178 756 aa16.15■□□□□ 0.18
CTSA-213ENST00000606782 UBXN2AP68543 259 aa16.15■□□□□ 0.18
CTSA-213ENST00000606782 DDX60LQ5H9U9 1706 aaKnown RBP16.15■□□□□ 0.18
CTSA-213ENST00000606782 COA7Q96BR5 231 aa16.15■□□□□ 0.18
CTSA-213ENST00000606782 SHISA4Q96DD7 197 aa16.15■□□□□ 0.18
CTSA-213ENST00000606782 C12orf42Q96LP6 360 aa16.15■□□□□ 0.18
CTSA-213ENST00000606782 DNAJC2Q99543 621 aaKnown RBP16.15■□□□□ 0.18
CTSA-213ENST00000606782 P2RX7Q99572 595 aaKnown RBP16.15■□□□□ 0.18
CTSA-213ENST00000606782 HAUS7Q99871 368 aa16.15■□□□□ 0.18
CTSA-213ENST00000606782 CRNKL1Q9BZJ0 848 aaKnown RBP16.15■□□□□ 0.18
CTSA-213ENST00000606782 RWDD1Q9H446 243 aaPredicted RBP16.15■□□□□ 0.18
CTSA-213ENST00000606782 EMILIN3Q9NT22 766 aa16.15■□□□□ 0.18
CTSA-213ENST00000606782 PAG1Q9NWQ8 432 aa16.15■□□□□ 0.18
CTSA-213ENST00000606782 GJD2Q9UKL4 321 aa16.15■□□□□ 0.18
CTSA-213ENST00000606782 MYCP01106 439 aaPredicted RBP16.14■□□□□ 0.17
CTSA-213ENST00000606782 IGHDP01880 384 aa16.14■□□□□ 0.17
CTSA-213ENST00000606782 CCL5P13501 91 aa16.14■□□□□ 0.17
CTSA-213ENST00000606782 SHMT1P34896 483 aa16.14■□□□□ 0.17
CTSA-213ENST00000606782 CERKLQ49MI3 558 aaPredicted RBP16.14■□□□□ 0.17
CTSA-213ENST00000606782 USP17L2Q6R6M4 530 aa16.14■□□□□ 0.17
CTSA-213ENST00000606782 EDC3Q96F86 508 aaKnown RBP16.14■□□□□ 0.17
CTSA-213ENST00000606782 LRRCC1Q9C099 1032 aa16.14■□□□□ 0.17
CTSA-213ENST00000606782 ADD2P35612 726 aa16.13■□□□□ 0.17
CTSA-213ENST00000606782 HERVK_113P62684 666 aa16.13■□□□□ 0.17
CTSA-213ENST00000606782 IRX3P78415 501 aaPredicted RBP16.13■□□□□ 0.17
CTSA-213ENST00000606782 UBE2Q1Q7Z7E8 422 aa16.13■□□□□ 0.17
CTSA-213ENST00000606782 GTF3C2Q8WUA4 911 aaPredicted RBP16.13■□□□□ 0.17
CTSA-213ENST00000606782 KIAA1683Q9H0B3 1180 aa16.13■□□□□ 0.17
CTSA-213ENST00000606782 RNF208Q9H0X6 261 aa16.13■□□□□ 0.17
CTSA-213ENST00000606782 BOLA2Q9H3K6 86 aa16.13■□□□□ 0.17
CTSA-213ENST00000606782 DCP1AQ9NPI6 582 aaPredicted RBP16.13■□□□□ 0.17
CTSA-213ENST00000606782 RBPJLQ9UBG7 517 aa16.13■□□□□ 0.17
CTSA-213ENST00000606782 ELNP15502 786 aa16.12■□□□□ 0.17
CTSA-213ENST00000606782 GUCY1A2P33402 732 aa16.12■□□□□ 0.17
CTSA-213ENST00000606782 UBE3CQ15386 1083 aa16.12■□□□□ 0.17
CTSA-213ENST00000606782 ABCB5Q2M3G0 1257 aa16.12■□□□□ 0.17
CTSA-213ENST00000606782 LCORLQ8N3X6 602 aa16.12■□□□□ 0.17
CTSA-213ENST00000606782 GCC1Q96CN9 775 aa16.12■□□□□ 0.17
CTSA-213ENST00000606782 TXNRD2Q9NNW7 524 aa16.12■□□□□ 0.17
CTSA-213ENST00000606782 MCM9Q9NXL9 1143 aa16.12■□□□□ 0.17
CTSA-213ENST00000606782 BIN2Q9UBW5 565 aaPredicted RBP16.12■□□□□ 0.17
CTSA-213ENST00000606782 POLR3DP05423 398 aaPredicted RBP16.11■□□□□ 0.17
CTSA-213ENST00000606782 USP14P54578 494 aa16.11■□□□□ 0.17
CTSA-213ENST00000606782 POTEEQ6S8J3 1075 aa16.11■□□□□ 0.17
CTSA-213ENST00000606782 GPRC5AQ8NFJ5 357 aa16.11■□□□□ 0.17
CTSA-213ENST00000606782 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.11■□□□□ 0.17
CTSA-213ENST00000606782 UNC93B1Q9H1C4 597 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms