RNA–Protein interactions for RNA: ENST00000606699.5

NECAB3-220, Transcript of N-terminal EF-hand calcium binding protein 3, humanhuman

TSL 2

Gene NECAB3, Length 1,022 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAB3-220ENST00000606699 GTF3C2Q8WUA4 911 aaPredicted RBP22.7■■□□□ 1.22
NECAB3-220ENST00000606699 TRIB2Q92519 343 aa22.7■■□□□ 1.22
NECAB3-220ENST00000606699 FRAT1Q92837 279 aaPredicted RBP22.7■■□□□ 1.22
NECAB3-220ENST00000606699 USP17L10C9JJH3 530 aa22.69■■□□□ 1.22
NECAB3-220ENST00000606699 MAPK4P31152 587 aa22.69■■□□□ 1.22
NECAB3-220ENST00000606699 HERVK_113P62684 666 aa22.69■■□□□ 1.22
NECAB3-220ENST00000606699 GPR108Q9NPR9 543 aa22.69■■□□□ 1.22
NECAB3-220ENST00000606699 COL6A3P12111 3177 aa22.69■■□□□ 1.22
NECAB3-220ENST00000606699 DLL1O00548 723 aa22.68■■□□□ 1.22
NECAB3-220ENST00000606699 CYP2B6P20813 491 aa22.68■■□□□ 1.22
NECAB3-220ENST00000606699 PDE3AQ14432 1141 aa22.68■■□□□ 1.22
NECAB3-220ENST00000606699 LRIT3Q3SXY7 679 aa22.68■■□□□ 1.22
NECAB3-220ENST00000606699 TGFBRAP1Q8WUH2 860 aa22.68■■□□□ 1.22
NECAB3-220ENST00000606699 TRIM34Q9BYJ4 488 aa22.68■■□□□ 1.22
NECAB3-220ENST00000606699 AATFQ9NY61 560 aaKnown RBP eCLIP22.68■■□□□ 1.222e-8■■■■□ 22.6
NECAB3-220ENST00000606699 TNNQ9UQP3 1299 aa22.68■■□□□ 1.22
NECAB3-220ENST00000606699 PRKAR2AP13861 404 aaKnown RBP22.67■■□□□ 1.22
NECAB3-220ENST00000606699 CCDC158Q5M9N0 1113 aa22.67■■□□□ 1.22
NECAB3-220ENST00000606699 TXNRD2Q9NNW7 524 aa22.67■■□□□ 1.22
NECAB3-220ENST00000606699 ZMYND8Q9ULU4 1186 aaPredicted RBP22.67■■□□□ 1.22
NECAB3-220ENST00000606699 A0A0C4DFX4 3053 aa22.67■■□□□ 1.22
NECAB3-220ENST00000606699 PNMA6EA0A0J9YXQ4 647 aa22.66■■□□□ 1.22
NECAB3-220ENST00000606699 ATF7IPQ6VMQ6 1270 aa22.66■■□□□ 1.22
NECAB3-220ENST00000606699 CRACR2BQ8N4Y2 399 aaPredicted RBP22.66■■□□□ 1.22
NECAB3-220ENST00000606699 USP6NLQ92738 828 aa22.66■■□□□ 1.22
NECAB3-220ENST00000606699 ZNF512BQ96KM6 892 aaPredicted RBP22.66■■□□□ 1.22
NECAB3-220ENST00000606699 DNAJC18Q9H819 358 aa22.66■■□□□ 1.22
NECAB3-220ENST00000606699 RBPJLQ9UBG7 517 aa22.66■■□□□ 1.22
NECAB3-220ENST00000606699 ALPK3Q96L96 1907 aa22.65■■□□□ 1.22
NECAB3-220ENST00000606699 FLT1P17948 1338 aa22.65■■□□□ 1.22
NECAB3-220ENST00000606699 ERVK-9P63128 1117 aa22.65■■□□□ 1.22
NECAB3-220ENST00000606699 ERVK-24P63145 666 aa22.65■■□□□ 1.22
NECAB3-220ENST00000606699 JAG1P78504 1218 aa22.65■■□□□ 1.22
NECAB3-220ENST00000606699 TTC39AQ5SRH9 613 aa22.65■■□□□ 1.22
NECAB3-220ENST00000606699 MAPKAPK5Q8IW41 473 aa22.65■■□□□ 1.22
NECAB3-220ENST00000606699 CCAR1Q8IX12 1150 aaKnown RBP22.65■■□□□ 1.22
NECAB3-220ENST00000606699 ATAD5Q96QE3 1844 aa22.65■■□□□ 1.22
NECAB3-220ENST00000606699 TRIM27P14373 513 aa22.64■■□□□ 1.21
NECAB3-220ENST00000606699 ZKSCAN1P17029 563 aaPredicted RBP22.64■■□□□ 1.21
NECAB3-220ENST00000606699 MAGEA10P43363 369 aaPredicted RBP22.64■■□□□ 1.21
NECAB3-220ENST00000606699 CACNB2Q08289 660 aaPredicted RBP22.64■■□□□ 1.21
NECAB3-220ENST00000606699 TDHQ8IZJ6 230 aa22.64■■□□□ 1.21
NECAB3-220ENST00000606699 PALD1Q9ULE6 856 aa22.64■■□□□ 1.21
NECAB3-220ENST00000606699 ZBTB21Q9ULJ3 1066 aa22.64■■□□□ 1.21
NECAB3-220ENST00000606699 PFASO15067 1338 aa22.63■■□□□ 1.21
NECAB3-220ENST00000606699 CYP2E1P05181 493 aaPredicted RBP22.63■■□□□ 1.21
NECAB3-220ENST00000606699 HLA-DOAP06340 250 aa22.63■■□□□ 1.21
NECAB3-220ENST00000606699 COL6A1P12109 1028 aa22.63■■□□□ 1.21
NECAB3-220ENST00000606699 RGS2P41220 211 aa22.63■■□□□ 1.21
NECAB3-220ENST00000606699 Q3C1V9 767 aa22.63■■□□□ 1.21
NECAB3-220ENST00000606699 TNNI3KQ59H18 835 aa22.63■■□□□ 1.21
NECAB3-220ENST00000606699 MORN1Q5T089 497 aa22.63■■□□□ 1.21
NECAB3-220ENST00000606699 ZKSCAN2Q63HK3 967 aa22.63■■□□□ 1.21
NECAB3-220ENST00000606699 USP17L2Q6R6M4 530 aa22.63■■□□□ 1.21
NECAB3-220ENST00000606699 GPR142Q7Z601 462 aa22.63■■□□□ 1.21
NECAB3-220ENST00000606699 PLEKHH3Q7Z736 793 aa22.63■■□□□ 1.21
NECAB3-220ENST00000606699 DEFB123Q8N688 67 aa22.63■■□□□ 1.21
NECAB3-220ENST00000606699 CLUAP1Q96AJ1 413 aa22.63■■□□□ 1.21
NECAB3-220ENST00000606699 SNRKQ9NRH2 765 aa22.63■■□□□ 1.21
NECAB3-220ENST00000606699 FPGT-TNNI3KV9GXZ4 949 aa22.63■■□□□ 1.21
NECAB3-220ENST00000606699 PLXNB2O15031 1838 aa22.62■■□□□ 1.21
NECAB3-220ENST00000606699 SYN1P17600 705 aa22.62■■□□□ 1.21
NECAB3-220ENST00000606699 LHX8Q68G74 356 aa22.62■■□□□ 1.21
NECAB3-220ENST00000606699 CERS3Q8IU89 383 aa22.62■■□□□ 1.21
NECAB3-220ENST00000606699 EMILIN3Q9NT22 766 aa22.62■■□□□ 1.21
NECAB3-220ENST00000606699 RCAN3Q9UKA8 241 aa22.62■■□□□ 1.21
NECAB3-220ENST00000606699 GDF11O95390 407 aa22.61■■□□□ 1.21
NECAB3-220ENST00000606699 POLA2Q14181 598 aa22.61■■□□□ 1.21
NECAB3-220ENST00000606699 ADGRA1Q86SQ6 560 aa22.61■■□□□ 1.21
NECAB3-220ENST00000606699 APBA2Q99767 749 aa22.61■■□□□ 1.21
NECAB3-220ENST00000606699 UBE2OQ9C0C9 1292 aaKnown RBP22.61■■□□□ 1.21
NECAB3-220ENST00000606699 PORCNQ9H237 461 aa22.61■■□□□ 1.21
NECAB3-220ENST00000606699 RABGAP1Q9Y3P9 1069 aa22.61■■□□□ 1.21
NECAB3-220ENST00000606699 PEX10O60683 326 aa22.6■■□□□ 1.21
NECAB3-220ENST00000606699 GLRX3O76003 335 aaKnown RBP22.6■■□□□ 1.21
NECAB3-220ENST00000606699 C12orf42Q96LP6 360 aa22.6■■□□□ 1.21
NECAB3-220ENST00000606699 DBNDD2Q9BQY9 259 aa22.6■■□□□ 1.21
NECAB3-220ENST00000606699 CCNA1P78396 465 aa22.59■■□□□ 1.21
NECAB3-220ENST00000606699 TATDN1Q6P1N9 297 aa22.59■■□□□ 1.21
NECAB3-220ENST00000606699 TMED8Q6PL24 325 aaPredicted RBP22.59■■□□□ 1.21
NECAB3-220ENST00000606699 SSH3Q8TE77 659 aa22.59■■□□□ 1.21
NECAB3-220ENST00000606699 PAGR1Q9BTK6 254 aa22.59■■□□□ 1.21
NECAB3-220ENST00000606699 STXBP5LQ9Y2K9 1186 aa22.59■■□□□ 1.21
NECAB3-220ENST00000606699 DDX60LQ5H9U9 1706 aaKnown RBP22.59■■□□□ 1.21
NECAB3-220ENST00000606699 SIPA1L1O43166 1804 aa22.59■■□□□ 1.21
NECAB3-220ENST00000606699 USP17L15C9J2P7 530 aa22.58■■□□□ 1.21
NECAB3-220ENST00000606699 USP17L13C9JLJ4 530 aa22.58■■□□□ 1.21
NECAB3-220ENST00000606699 USP17L11C9JVI0 530 aa22.58■■□□□ 1.21
NECAB3-220ENST00000606699 USP17L18D6R9N7 530 aa22.58■■□□□ 1.21
NECAB3-220ENST00000606699 USP17L22D6RA61 530 aa22.58■■□□□ 1.21
NECAB3-220ENST00000606699 USP17L17D6RBQ6 530 aa22.58■■□□□ 1.21
NECAB3-220ENST00000606699 USP17L19D6RCP7 530 aa22.58■■□□□ 1.21
NECAB3-220ENST00000606699 USP17L20D6RJB6 530 aa22.58■■□□□ 1.21
NECAB3-220ENST00000606699 CCND3P30281 292 aaPredicted RBP22.58■■□□□ 1.21
NECAB3-220ENST00000606699 USP14P54578 494 aa22.58■■□□□ 1.21
NECAB3-220ENST00000606699 ATP8B2P98198 1209 aa22.58■■□□□ 1.21
NECAB3-220ENST00000606699 USP17L24Q0WX57 530 aa22.58■■□□□ 1.21
NECAB3-220ENST00000606699 MAP2K5Q13163 448 aa22.58■■□□□ 1.21
NECAB3-220ENST00000606699 OS9Q13438 667 aaPredicted RBP22.58■■□□□ 1.21
NECAB3-220ENST00000606699 CCL14Q16627 93 aa22.58■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms