RNA–Protein interactions for RNA: ENST00000606602.1

SNX5-219, Transcript of sorting nexin 5, humanhuman

TSL 1 (best) BASIC

Gene SNX5, Length 885 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX5-219ENST00000606602 COLQQ9Y215 455 aaPredicted RBP29.67■■■□□ 2.34
SNX5-219ENST00000606602 SGPL1O95470 568 aa29.66■■■□□ 2.34
SNX5-219ENST00000606602 IRX3P78415 501 aaPredicted RBP29.66■■■□□ 2.34
SNX5-219ENST00000606602 GINM1Q9NU53 330 aa29.66■■■□□ 2.34
SNX5-219ENST00000606602 LOC285556D6RIA3 1793 aa29.66■■■□□ 2.34
SNX5-219ENST00000606602 USP5P45974 858 aa29.65■■■□□ 2.34
SNX5-219ENST00000606602 UBE2Q1Q7Z7E8 422 aa29.65■■■□□ 2.34
SNX5-219ENST00000606602 CERS3Q8IU89 383 aa29.65■■■□□ 2.34
SNX5-219ENST00000606602 ANTXR1Q9H6X2 564 aa29.65■■■□□ 2.34
SNX5-219ENST00000606602 ZBTB21Q9ULJ3 1066 aa29.65■■■□□ 2.34
SNX5-219ENST00000606602 ATAD5Q96QE3 1844 aa29.65■■■□□ 2.34
SNX5-219ENST00000606602 SIPA1L1O43166 1804 aa29.64■■■□□ 2.34
SNX5-219ENST00000606602 C19orf81C9J6K1 198 aa29.64■■■□□ 2.34
SNX5-219ENST00000606602 USP17L10C9JJH3 530 aa29.64■■■□□ 2.34
SNX5-219ENST00000606602 MAP3K12Q12852 859 aa29.64■■■□□ 2.34
SNX5-219ENST00000606602 HTATIP2Q9BUP3 242 aa29.64■■■□□ 2.34
SNX5-219ENST00000606602 FARP2O94887 1054 aaPredicted RBP29.63■■■□□ 2.33
SNX5-219ENST00000606602 DEFB118Q96PH6 123 aa29.63■■■□□ 2.33
SNX5-219ENST00000606602 IL1RAPL2Q9NP60 686 aa29.63■■■□□ 2.33
SNX5-219ENST00000606602 TFRCP02786 760 aaKnown RBP29.62■■■□□ 2.33
SNX5-219ENST00000606602 HOXA7P31268 230 aaPredicted RBP29.62■■■□□ 2.33
SNX5-219ENST00000606602 HSP90AB4PQ58FF6 505 aa29.62■■■□□ 2.33
SNX5-219ENST00000606602 P2RX7Q99572 595 aaKnown RBP29.62■■■□□ 2.33
SNX5-219ENST00000606602 MORF4L1Q9UBU8 362 aa29.62■■■□□ 2.33
SNX5-219ENST00000606602 MS4A1P11836 297 aa29.61■■■□□ 2.33
SNX5-219ENST00000606602 MYO5AQ9Y4I1 1855 aaKnown RBP29.6■■■□□ 2.33
SNX5-219ENST00000606602 TMED8Q6PL24 325 aaPredicted RBP29.6■■■□□ 2.33
SNX5-219ENST00000606602 RHPN1Q8TCX5 695 aa29.6■■■□□ 2.33
SNX5-219ENST00000606602 PAK6Q9NQU5 681 aaPredicted RBP29.6■■■□□ 2.33
SNX5-219ENST00000606602 GJD2Q9UKL4 321 aa29.6■■■□□ 2.33
SNX5-219ENST00000606602 GH2P01242 217 aa29.59■■■□□ 2.33
SNX5-219ENST00000606602 HERVK_113P62684 666 aa29.59■■■□□ 2.33
SNX5-219ENST00000606602 APBB1O00213 710 aa29.58■■■□□ 2.33
SNX5-219ENST00000606602 FXR1P51114 621 aaKnown RBP eCLIP29.58■■■□□ 2.33
SNX5-219ENST00000606602 TTC6Q86TZ1 520 aa29.58■■■□□ 2.33
SNX5-219ENST00000606602 GPRC5AQ8NFJ5 357 aa29.58■■■□□ 2.33
SNX5-219ENST00000606602 SERPINB13Q9UIV8 391 aa29.58■■■□□ 2.33
SNX5-219ENST00000606602 CDK5RAP2Q96SN8 1893 aa29.57■■■□□ 2.32
SNX5-219ENST00000606602 FOCADQ5VW36 1801 aa29.57■■■□□ 2.32
SNX5-219ENST00000606602 PEX10O60683 326 aa29.57■■■□□ 2.32
SNX5-219ENST00000606602 HMGCRP04035 888 aa29.57■■■□□ 2.32
SNX5-219ENST00000606602 CAPN2P17655 700 aa29.57■■■□□ 2.32
SNX5-219ENST00000606602 TATDN1Q6P1N9 297 aa29.57■■■□□ 2.32
SNX5-219ENST00000606602 USP17L2Q6R6M4 530 aa29.57■■■□□ 2.32
SNX5-219ENST00000606602 XRN2Q9H0D6 950 aaKnown RBP eCLIP29.57■■■□□ 2.322e-6■□□□□ 9.9
SNX5-219ENST00000606602 EHD4Q9H223 541 aa29.57■■■□□ 2.32
SNX5-219ENST00000606602 TXNRD2Q9NNW7 524 aa29.57■■■□□ 2.32
SNX5-219ENST00000606602 EMILIN3Q9NT22 766 aa29.57■■■□□ 2.32
SNX5-219ENST00000606602 TTF1Q15361 905 aaPredicted RBP29.56■■■□□ 2.32
SNX5-219ENST00000606602 CHRDL2Q6WN34 429 aa29.56■■■□□ 2.32
SNX5-219ENST00000606602 CLASRPQ8N2M8 674 aaKnown RBP29.56■■■□□ 2.32
SNX5-219ENST00000606602 NR2E3Q9Y5X4 410 aa29.56■■■□□ 2.32
SNX5-219ENST00000606602 RPAP2Q8IXW5 612 aaPredicted RBP29.55■■■□□ 2.32
SNX5-219ENST00000606602 KIF1BPQ96EK5 621 aa29.55■■■□□ 2.32
SNX5-219ENST00000606602 FEZ1Q99689 392 aa29.55■■■□□ 2.32
SNX5-219ENST00000606602 RIOK1Q9BRS2 568 aaKnown RBP29.55■■■□□ 2.32
SNX5-219ENST00000606602 CRISPLD2Q9H0B8 497 aa29.55■■■□□ 2.32
SNX5-219ENST00000606602 BCL11AQ9H165 835 aa29.55■■■□□ 2.32
SNX5-219ENST00000606602 RBPJLQ9UBG7 517 aa29.55■■■□□ 2.32
SNX5-219ENST00000606602 MAGEB6P1A0A0J9YX57 407 aa29.54■■■□□ 2.32
SNX5-219ENST00000606602 ZYXQ15942 572 aaKnown RBP29.54■■■□□ 2.32
SNX5-219ENST00000606602 COG6Q9Y2V7 657 aa29.54■■■□□ 2.32
SNX5-219ENST00000606602 CEP290O15078 2479 aa29.54■■■□□ 2.32
SNX5-219ENST00000606602 HMMRO75330 724 aa29.53■■■□□ 2.32
SNX5-219ENST00000606602 IFIT2P09913 472 aaKnown RBP29.53■■■□□ 2.32
SNX5-219ENST00000606602 CYP2B6P20813 491 aa29.53■■■□□ 2.32
SNX5-219ENST00000606602 TRIM32Q13049 653 aa29.53■■■□□ 2.32
SNX5-219ENST00000606602 RAB3GAP1Q15042 981 aa29.53■■■□□ 2.32
SNX5-219ENST00000606602 CERKLQ49MI3 558 aaPredicted RBP29.53■■■□□ 2.32
SNX5-219ENST00000606602 SLC9C2Q5TAH2 1124 aa29.53■■■□□ 2.32
SNX5-219ENST00000606602 CCAR1Q8IX12 1150 aaKnown RBP29.53■■■□□ 2.32
SNX5-219ENST00000606602 DDX19BQ9UMR2 479 aa29.53■■■□□ 2.32
SNX5-219ENST00000606602 PDE6AP16499 860 aa29.52■■■□□ 2.32
SNX5-219ENST00000606602 PLCD1P51178 756 aa29.52■■■□□ 2.32
SNX5-219ENST00000606602 ABCB5Q2M3G0 1257 aa29.52■■■□□ 2.32
SNX5-219ENST00000606602 GTF3C2Q8WUA4 911 aaPredicted RBP29.52■■■□□ 2.32
SNX5-219ENST00000606602 DNAJC2Q99543 621 aaKnown RBP29.52■■■□□ 2.32
SNX5-219ENST00000606602 NUDT12Q9BQG2 462 aa29.52■■■□□ 2.32
SNX5-219ENST00000606602 PAGR1Q9BTK6 254 aa29.52■■■□□ 2.32
SNX5-219ENST00000606602 HMX1Q9NP08 348 aaPredicted RBP29.52■■■□□ 2.32
SNX5-219ENST00000606602 RPTORQ8N122 1335 aa29.51■■■□□ 2.32
SNX5-219ENST00000606602 GOLIM4O00461 696 aa29.51■■■□□ 2.31
SNX5-219ENST00000606602 POLR3DP05423 398 aaPredicted RBP29.51■■■□□ 2.31
SNX5-219ENST00000606602 MAPK4P31152 587 aa29.51■■■□□ 2.31
SNX5-219ENST00000606602 ERVK-9P63128 1117 aa29.51■■■□□ 2.31
SNX5-219ENST00000606602 ERVK-24P63145 666 aa29.51■■■□□ 2.31
SNX5-219ENST00000606602 Q3C1V9 767 aa29.51■■■□□ 2.31
SNX5-219ENST00000606602 SIRT2Q8IXJ6 389 aa29.51■■■□□ 2.31
SNX5-219ENST00000606602 SOCS4Q8WXH5 440 aa29.51■■■□□ 2.31
SNX5-219ENST00000606602 TRIB2Q92519 343 aa29.51■■■□□ 2.31
SNX5-219ENST00000606602 PAWRQ96IZ0 340 aaKnown RBP29.51■■■□□ 2.31
SNX5-219ENST00000606602 CABP5Q9NP86 173 aa29.51■■■□□ 2.31
SNX5-219ENST00000606602 ZBTB40Q9NUA8 1239 aa29.51■■■□□ 2.31
SNX5-219ENST00000606602 DOCK3Q8IZD9 2030 aa29.5■■■□□ 2.31
SNX5-219ENST00000606602 PDE3AQ14432 1141 aa29.5■■■□□ 2.31
SNX5-219ENST00000606602 C12orf42Q96LP6 360 aa29.5■■■□□ 2.31
SNX5-219ENST00000606602 CRNKL1Q9BZJ0 848 aaKnown RBP29.5■■■□□ 2.31
SNX5-219ENST00000606602 USP17L15C9J2P7 530 aa29.49■■■□□ 2.31
SNX5-219ENST00000606602 USP17L13C9JLJ4 530 aa29.49■■■□□ 2.31
SNX5-219ENST00000606602 USP17L11C9JVI0 530 aa29.49■■■□□ 2.31
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms