RNA–Protein interactions for RNA: ENST00000603946.5

NOLC1-208, Transcript of nucleolar and coiled-body phosphoprotein 1, humanhuman

TSL 1 (best)

Gene NOLC1, Length 3,217 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOLC1-208ENST00000603946 ANTXR2P58335 489 aa9.61□□□□□ -0.87
NOLC1-208ENST00000603946 RNF20Q5VTR2 975 aa9.61□□□□□ -0.87
NOLC1-208ENST00000603946 DDX11Q96FC9 970 aa9.61□□□□□ -0.87
NOLC1-208ENST00000603946 NUP88Q99567 741 aaPredicted RBP9.61□□□□□ -0.87
NOLC1-208ENST00000603946 VAT1LQ9HCJ6 419 aa9.61□□□□□ -0.87
NOLC1-208ENST00000603946 ANGEL1Q9UNK9 670 aaKnown RBP9.61□□□□□ -0.87
NOLC1-208ENST00000603946 MYO3BQ8WXR4 1341 aa9.61□□□□□ -0.87
NOLC1-208ENST00000603946 CNTNAP1P78357 1384 aa9.61□□□□□ -0.87
NOLC1-208ENST00000603946 HSP90AA1P07900 732 aaKnown RBP9.61□□□□□ -0.87
NOLC1-208ENST00000603946 TAL1P17542 331 aaPredicted RBP9.61□□□□□ -0.87
NOLC1-208ENST00000603946 ZNF280AP59817 542 aaPredicted RBP9.61□□□□□ -0.87
NOLC1-208ENST00000603946 CLIP2Q9UDT6 1046 aa9.61□□□□□ -0.87
NOLC1-208ENST00000603946 CTNNA3Q9UI47 895 aa9.61□□□□□ -0.87
NOLC1-208ENST00000603946 AMOTL1Q8IY63 956 aa9.6□□□□□ -0.87
NOLC1-208ENST00000603946 CHAMP1Q96JM3 812 aa9.6□□□□□ -0.87
NOLC1-208ENST00000603946 WRNIP1Q96S55 665 aa9.6□□□□□ -0.87
NOLC1-208ENST00000603946 VPS33BQ9H267 617 aa9.6□□□□□ -0.87
NOLC1-208ENST00000603946 GJB4Q9NTQ9 266 aa9.6□□□□□ -0.87
NOLC1-208ENST00000603946 CYP46A1Q9Y6A2 500 aa9.6□□□□□ -0.87
NOLC1-208ENST00000603946 TRIM75PA6NK02 468 aa9.6□□□□□ -0.87
NOLC1-208ENST00000603946 PLCG2P16885 1265 aa9.6□□□□□ -0.87
NOLC1-208ENST00000603946 GNAT2P19087 354 aa9.6□□□□□ -0.87
NOLC1-208ENST00000603946 CERKLQ49MI3 558 aaPredicted RBP9.6□□□□□ -0.87
NOLC1-208ENST00000603946 TBC1D2Q9BYX2 928 aa9.6□□□□□ -0.87
NOLC1-208ENST00000603946 PI4KBQ9UBF8 816 aa9.6□□□□□ -0.87
NOLC1-208ENST00000603946 HLA-DOAP06340 250 aa9.6□□□□□ -0.87
NOLC1-208ENST00000603946 RASA1P20936 1047 aa9.6□□□□□ -0.87
NOLC1-208ENST00000603946 RPS12P25398 132 aaKnown RBP9.6□□□□□ -0.87
NOLC1-208ENST00000603946 ANP32AP39687 249 aaKnown RBP9.6□□□□□ -0.87
NOLC1-208ENST00000603946 TMEM67Q5HYA8 995 aa9.6□□□□□ -0.87
NOLC1-208ENST00000603946 NCOA7Q8NI08 942 aa9.6□□□□□ -0.87
NOLC1-208ENST00000603946 ACER1Q8TDN7 264 aa9.6□□□□□ -0.87
NOLC1-208ENST00000603946 CEP95Q96GE4 821 aa9.6□□□□□ -0.87
NOLC1-208ENST00000603946 TEPSINQ96N21 525 aa9.6□□□□□ -0.87
NOLC1-208ENST00000603946 IL17RBQ9NRM6 502 aa9.6□□□□□ -0.87
NOLC1-208ENST00000603946 TPCN1Q9ULQ1 816 aa9.6□□□□□ -0.87
NOLC1-208ENST00000603946 SUGT1Q9Y2Z0 365 aa9.6□□□□□ -0.87
NOLC1-208ENST00000603946 PDS5AQ29RF7 1337 aaKnown RBP9.59□□□□□ -0.87
NOLC1-208ENST00000603946 SHMT1P34896 483 aa9.59□□□□□ -0.87
NOLC1-208ENST00000603946 TTC6Q86TZ1 520 aa9.59□□□□□ -0.87
NOLC1-208ENST00000603946 CCDC83Q8IWF9 413 aa9.59□□□□□ -0.87
NOLC1-208ENST00000603946 BRPF3Q9ULD4 1205 aa9.59□□□□□ -0.87
NOLC1-208ENST00000603946 ADD1P35611 737 aaKnown RBP9.59□□□□□ -0.87
NOLC1-208ENST00000603946 RBM25P49756 843 aaKnown RBP9.59□□□□□ -0.87
NOLC1-208ENST00000603946 PDE4BQ07343 736 aa9.59□□□□□ -0.87
NOLC1-208ENST00000603946 RUFY3Q7L099 469 aa9.59□□□□□ -0.87
NOLC1-208ENST00000603946 FAM151AQ8WW52 585 aa9.59□□□□□ -0.87
NOLC1-208ENST00000603946 UBAC1Q9BSL1 405 aa9.59□□□□□ -0.87
NOLC1-208ENST00000603946 FRMPD2Q68DX3 1309 aaPredicted RBP9.59□□□□□ -0.87
NOLC1-208ENST00000603946 CELF2O95319 508 aaKnown RBP9.58□□□□□ -0.88
NOLC1-208ENST00000603946 SLC16A2P36021 539 aa9.58□□□□□ -0.88
NOLC1-208ENST00000603946 UBA5Q9GZZ9 404 aa9.58□□□□□ -0.88
NOLC1-208ENST00000603946 TNKSO95271 1327 aa9.58□□□□□ -0.88
NOLC1-208ENST00000603946 KLF18A0A0U1RQI7 1052 aa9.58□□□□□ -0.88
NOLC1-208ENST00000603946 USP17L2Q6R6M4 530 aa9.58□□□□□ -0.88
NOLC1-208ENST00000603946 ZNF784Q8NCA9 323 aaPredicted RBP9.58□□□□□ -0.88
NOLC1-208ENST00000603946 ELP3Q9H9T3 547 aa9.58□□□□□ -0.88
NOLC1-208ENST00000603946 ARPP21Q9UBL0 812 aaPredicted RBP9.58□□□□□ -0.88
NOLC1-208ENST00000603946 ARAP2Q8WZ64 1704 aa9.58□□□□□ -0.88
NOLC1-208ENST00000603946 ARFGEF1Q9Y6D6 1849 aa9.58□□□□□ -0.88
NOLC1-208ENST00000603946 HTTP42858 3142 aa9.58□□□□□ -0.88
NOLC1-208ENST00000603946 IQCA1LA6NCM1 817 aa9.58□□□□□ -0.88
NOLC1-208ENST00000603946 RPS6KB1P23443 525 aa9.58□□□□□ -0.88
NOLC1-208ENST00000603946 GUCY1B3Q02153 619 aa9.58□□□□□ -0.88
NOLC1-208ENST00000603946 TOB2Q14106 344 aaPredicted RBP9.58□□□□□ -0.88
NOLC1-208ENST00000603946 ME3Q16798 604 aa9.58□□□□□ -0.88
NOLC1-208ENST00000603946 DHX32Q7L7V1 743 aaKnown RBP9.58□□□□□ -0.88
NOLC1-208ENST00000603946 CDCA5Q96FF9 252 aa9.58□□□□□ -0.88
NOLC1-208ENST00000603946 IDI2Q9BXS1 227 aa9.58□□□□□ -0.88
NOLC1-208ENST00000603946 A0A1W2PRG0 241 aa9.57□□□□□ -0.88
NOLC1-208ENST00000603946 HDLBPQ00341 1268 aaKnown RBP9.57□□□□□ -0.88
NOLC1-208ENST00000603946 KCTD1Q719H9 257 aa9.57□□□□□ -0.88
NOLC1-208ENST00000603946 ENAHQ8N8S7 591 aaPredicted RBP9.57□□□□□ -0.88
NOLC1-208ENST00000603946 PHKBQ93100 1093 aa9.57□□□□□ -0.88
NOLC1-208ENST00000603946 OTUD5Q96G74 571 aa9.57□□□□□ -0.88
NOLC1-208ENST00000603946 ZBED3Q96IU2 234 aaPredicted RBP9.57□□□□□ -0.88
NOLC1-208ENST00000603946 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.57□□□□□ -0.885e-7■□□□□ 10.1
NOLC1-208ENST00000603946 GPCPD1Q9NPB8 672 aa9.57□□□□□ -0.88
NOLC1-208ENST00000603946 ZHX2Q9Y6X8 837 aa9.57□□□□□ -0.88
NOLC1-208ENST00000603946 DHX16O60231 1041 aaKnown RBP9.57□□□□□ -0.88
NOLC1-208ENST00000603946 JAK2O60674 1132 aa9.57□□□□□ -0.88
NOLC1-208ENST00000603946 MCM5P33992 734 aa9.57□□□□□ -0.88
NOLC1-208ENST00000603946 FKBP1AP62942 108 aaKnown RBP9.57□□□□□ -0.88
NOLC1-208ENST00000603946 SPP2Q13103 211 aa9.57□□□□□ -0.88
NOLC1-208ENST00000603946 ABCB5Q2M3G0 1257 aa9.57□□□□□ -0.88
NOLC1-208ENST00000603946 OTUD7BQ6GQQ9 843 aa9.57□□□□□ -0.88
NOLC1-208ENST00000603946 MB21D2Q8IYB1 491 aaPredicted RBP9.57□□□□□ -0.88
NOLC1-208ENST00000603946 ESR2Q92731 530 aa9.57□□□□□ -0.88
NOLC1-208ENST00000603946 RPAP1Q9BWH6 1393 aaPredicted RBP9.56□□□□□ -0.88
NOLC1-208ENST00000603946 EEF2P13639 858 aaKnown RBP9.56□□□□□ -0.88
NOLC1-208ENST00000603946 TNNI2P48788 182 aa9.56□□□□□ -0.88
NOLC1-208ENST00000603946 HOMER1Q86YM7 354 aa9.56□□□□□ -0.88
NOLC1-208ENST00000603946 STAG2Q8N3U4 1231 aa9.56□□□□□ -0.88
NOLC1-208ENST00000603946 AIFM3Q96NN9 605 aa9.56□□□□□ -0.88
NOLC1-208ENST00000603946 ZSWIM6Q9HCJ5 1215 aa9.56□□□□□ -0.88
NOLC1-208ENST00000603946 MYH7P12883 1935 aa9.56□□□□□ -0.88
NOLC1-208ENST00000603946 IKQ13123 557 aaPredicted RBP9.56□□□□□ -0.88
NOLC1-208ENST00000603946 KIAA1755Q5JYT7 1200 aa9.56□□□□□ -0.88
NOLC1-208ENST00000603946 IFIT1BQ5T764 474 aaKnown RBP9.56□□□□□ -0.88
NOLC1-208ENST00000603946 TTBK2Q6IQ55 1244 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms