RNA–Protein interactions for RNA: ENST00000603334.1

DDX55P1-201, Transcript of DEAD-box helicase 55 pseudogene 1, humanhuman

BASIC

Gene DDX55P1, Length 1,414 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55P1-201ENST00000603334 FZD1Q9UP38 647 aa12.16□□□□□ -0.46
DDX55P1-201ENST00000603334 CASP8AP2Q9UKL3 1982 aa12.16□□□□□ -0.46
DDX55P1-201ENST00000603334 TCP10L2B9ZVM9 353 aa12.15□□□□□ -0.46
DDX55P1-201ENST00000603334 RHBDL3P58872 404 aa12.15□□□□□ -0.46
DDX55P1-201ENST00000603334 NOGQ13253 232 aa12.15□□□□□ -0.46
DDX55P1-201ENST00000603334 DHX32Q7L7V1 743 aaKnown RBP12.15□□□□□ -0.46
DDX55P1-201ENST00000603334 TTC14Q96N46 770 aa12.15□□□□□ -0.46
DDX55P1-201ENST00000603334 EPB41L4AQ9HCS5 686 aaPredicted RBP12.15□□□□□ -0.46
DDX55P1-201ENST00000603334 TSKSQ9UJT2 592 aa12.15□□□□□ -0.46
DDX55P1-201ENST00000603334 NAP1L2Q9ULW6 460 aaPredicted RBP12.15□□□□□ -0.46
DDX55P1-201ENST00000603334 COL2A1P02458 1487 aaPredicted RBP12.14□□□□□ -0.47
DDX55P1-201ENST00000603334 WDHD1O75717 1129 aaPredicted RBP12.14□□□□□ -0.47
DDX55P1-201ENST00000603334 IREB2P48200 963 aaKnown RBP12.14□□□□□ -0.47
DDX55P1-201ENST00000603334 ZNF157P51786 506 aaPredicted RBP12.14□□□□□ -0.47
DDX55P1-201ENST00000603334 RRP12Q5JTH9 1297 aaKnown RBP12.14□□□□□ -0.47
DDX55P1-201ENST00000603334 DCAF15Q66K64 600 aa12.14□□□□□ -0.47
DDX55P1-201ENST00000603334 MFSD6Q6ZSS7 791 aa12.14□□□□□ -0.47
DDX55P1-201ENST00000603334 CHST3Q7LGC8 479 aa12.14□□□□□ -0.47
DDX55P1-201ENST00000603334 CDAN1Q8IWY9 1227 aa12.14□□□□□ -0.47
DDX55P1-201ENST00000603334 AMOTL1Q8IY63 956 aa12.14□□□□□ -0.47
DDX55P1-201ENST00000603334 REM2Q8IYK8 340 aaPredicted RBP12.14□□□□□ -0.47
DDX55P1-201ENST00000603334 SH3RF3Q8TEJ3 882 aaPredicted RBP12.14□□□□□ -0.47
DDX55P1-201ENST00000603334 LRRC2Q9BYS8 371 aa12.14□□□□□ -0.47
DDX55P1-201ENST00000603334 MYH1P12882 1939 aa12.14□□□□□ -0.47
DDX55P1-201ENST00000603334 UBE2Q2LH0YL09 131 aa12.13□□□□□ -0.47
DDX55P1-201ENST00000603334 MCM5P33992 734 aa12.13□□□□□ -0.47
DDX55P1-201ENST00000603334 PPARAQ07869 468 aa12.13□□□□□ -0.47
DDX55P1-201ENST00000603334 LDLRAD1Q5T700 205 aa12.13□□□□□ -0.47
DDX55P1-201ENST00000603334 NBPF12Q5TAG4 269 aaPredicted RBP12.13□□□□□ -0.47
DDX55P1-201ENST00000603334 TEX11Q8IYF3 940 aa12.13□□□□□ -0.47
DDX55P1-201ENST00000603334 TGFBRAP1Q8WUH2 860 aa12.13□□□□□ -0.47
DDX55P1-201ENST00000603334 TMEM39BQ9GZU3 492 aa12.13□□□□□ -0.47
DDX55P1-201ENST00000603334 DHX36Q9H2U1 1008 aaKnown RBP12.13□□□□□ -0.47
DDX55P1-201ENST00000603334 ATP8A2Q9NTI2 1148 aa12.13□□□□□ -0.47
DDX55P1-201ENST00000603334 FAM198AQ9UFP1 575 aa12.13□□□□□ -0.47
DDX55P1-201ENST00000603334 TAOK2Q9UL54 1235 aa12.13□□□□□ -0.47
DDX55P1-201ENST00000603334 ZMYM6O95789 1325 aa12.13□□□□□ -0.47
DDX55P1-201ENST00000603334 HTTP42858 3142 aa12.13□□□□□ -0.47
DDX55P1-201ENST00000603334 CDK5RAP2Q96SN8 1893 aa12.13□□□□□ -0.47
DDX55P1-201ENST00000603334 PRC1O43663 620 aa12.12□□□□□ -0.47
DDX55P1-201ENST00000603334 SLC3A2P08195 630 aaKnown RBP12.12□□□□□ -0.47
DDX55P1-201ENST00000603334 KIF23Q02241 960 aaPredicted RBP12.12□□□□□ -0.47
DDX55P1-201ENST00000603334 MKRN4PQ13434 485 aaPredicted RBP12.12□□□□□ -0.47
DDX55P1-201ENST00000603334 TTLL12Q14166 644 aaPredicted RBP12.12□□□□□ -0.47
DDX55P1-201ENST00000603334 AKNAD1Q5T1N1 836 aa12.12□□□□□ -0.47
DDX55P1-201ENST00000603334 GIMAP6Q6P9H5 292 aa12.12□□□□□ -0.47
DDX55P1-201ENST00000603334 TBC1D10CQ8IV04 446 aa12.12□□□□□ -0.47
DDX55P1-201ENST00000603334 TNS4Q8IZW8 715 aa12.12□□□□□ -0.47
DDX55P1-201ENST00000603334 CSRNP1Q96S65 589 aa12.12□□□□□ -0.47
DDX55P1-201ENST00000603334 KRT23Q9C075 422 aa12.12□□□□□ -0.47
DDX55P1-201ENST00000603334 ALDH8A1Q9H2A2 487 aaPredicted RBP12.12□□□□□ -0.47
DDX55P1-201ENST00000603334 RNF41Q9H4P4 317 aaPredicted RBP12.12□□□□□ -0.47
DDX55P1-201ENST00000603334 INCENPQ9NQS7 918 aa12.12□□□□□ -0.47
DDX55P1-201ENST00000603334 SH2B1Q9NRF2 756 aaPredicted RBP12.12□□□□□ -0.47
DDX55P1-201ENST00000603334 MCM9Q9NXL9 1143 aa12.12□□□□□ -0.47
DDX55P1-201ENST00000603334 CHMP5Q9NZZ3 219 aa12.12□□□□□ -0.47
DDX55P1-201ENST00000603334 ATRNL1Q5VV63 1379 aa12.12□□□□□ -0.47
DDX55P1-201ENST00000603334 B4E1Z4 1266 aa12.11□□□□□ -0.47
DDX55P1-201ENST00000603334 USP17L12C9JPN9 530 aa12.11□□□□□ -0.47
DDX55P1-201ENST00000603334 USP17L21D6R901 530 aa12.11□□□□□ -0.47
DDX55P1-201ENST00000603334 TBC1D12O60347 775 aa12.11□□□□□ -0.47
DDX55P1-201ENST00000603334 POLR3DP05423 398 aaPredicted RBP12.11□□□□□ -0.47
DDX55P1-201ENST00000603334 CACNB3P54284 484 aa12.11□□□□□ -0.47
DDX55P1-201ENST00000603334 MAP3K10Q02779 954 aa12.11□□□□□ -0.47
DDX55P1-201ENST00000603334 NFIAQ12857 509 aa12.11□□□□□ -0.47
DDX55P1-201ENST00000603334 STK3Q13188 491 aa12.11□□□□□ -0.47
DDX55P1-201ENST00000603334 MAPKAPK5Q8IW41 473 aa12.11□□□□□ -0.47
DDX55P1-201ENST00000603334 CCDC83Q8IWF9 413 aa12.11□□□□□ -0.47
DDX55P1-201ENST00000603334 ANKRD13AQ8IZ07 590 aa12.11□□□□□ -0.47
DDX55P1-201ENST00000603334 BRF1Q92994 677 aa12.11□□□□□ -0.47
DDX55P1-201ENST00000603334 CNNM2Q9H8M5 875 aa12.11□□□□□ -0.47
DDX55P1-201ENST00000603334 CWC22Q9HCG8 908 aaKnown RBP12.11□□□□□ -0.47
DDX55P1-201ENST00000603334 DCP1AQ9NPI6 582 aaPredicted RBP12.11□□□□□ -0.47
DDX55P1-201ENST00000603334 ANGEL1Q9UNK9 670 aaKnown RBP12.11□□□□□ -0.47
DDX55P1-201ENST00000603334 CENPFP49454 3210 aa12.11□□□□□ -0.47
DDX55P1-201ENST00000603334 NAV1Q8NEY1 1877 aa12.11□□□□□ -0.47
DDX55P1-201ENST00000603334 CYP2D7A0A087X1C5 515 aa12.11□□□□□ -0.47
DDX55P1-201ENST00000603334 USP2O75604 605 aaPredicted RBP12.11□□□□□ -0.47
DDX55P1-201ENST00000603334 EXOSC10Q01780 885 aaKnown RBP12.11□□□□□ -0.47
DDX55P1-201ENST00000603334 PRKG1Q13976 671 aa12.11□□□□□ -0.47
DDX55P1-201ENST00000603334 COL9A3Q14050 684 aaPredicted RBP12.11□□□□□ -0.47
DDX55P1-201ENST00000603334 TOB2Q14106 344 aaPredicted RBP12.11□□□□□ -0.47
DDX55P1-201ENST00000603334 SLC4A8Q2Y0W8 1093 aa12.11□□□□□ -0.47
DDX55P1-201ENST00000603334 CTR9Q6PD62 1173 aa12.11□□□□□ -0.47
DDX55P1-201ENST00000603334 ZNF341Q9BYN7 854 aa12.11□□□□□ -0.47
DDX55P1-201ENST00000603334 OSBPL5Q9H0X9 879 aaPredicted RBP12.11□□□□□ -0.47
DDX55P1-201ENST00000603334 ARPP21Q9UBL0 812 aaPredicted RBP12.11□□□□□ -0.47
DDX55P1-201ENST00000603334 SAP30BPQ9UHR5 308 aaKnown RBP12.11□□□□□ -0.47
DDX55P1-201ENST00000603334 TPCN1Q9ULQ1 816 aa12.11□□□□□ -0.47
DDX55P1-201ENST00000603334 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.11□□□□□ -0.47
DDX55P1-201ENST00000603334 MAP3K9P80192 1104 aa12.1□□□□□ -0.47
DDX55P1-201ENST00000603334 APOBRQ0VD83 1088 aa12.1□□□□□ -0.47
DDX55P1-201ENST00000603334 TCP10Q12799 353 aa12.1□□□□□ -0.47
DDX55P1-201ENST00000603334 CUL4AQ13619 759 aa12.1□□□□□ -0.47
DDX55P1-201ENST00000603334 ME3Q16798 604 aa12.1□□□□□ -0.47
DDX55P1-201ENST00000603334 MB21D2Q8IYB1 491 aaPredicted RBP12.1□□□□□ -0.47
DDX55P1-201ENST00000603334 NECAB1Q8N987 351 aa12.1□□□□□ -0.47
DDX55P1-201ENST00000603334 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.1□□□□□ -0.47
DDX55P1-201ENST00000603334 STAG1Q8WVM7 1258 aa12.1□□□□□ -0.47
DDX55P1-201ENST00000603334 NBPF3Q9H094 633 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms