RNA–Protein interactions for RNA: ENST00000602783.1

PPFIA3-209, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 1 (best)

Gene PPFIA3, Length 980 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-209ENST00000602783 PXYLP1Q8TE99 480 aa25.83■■□□□ 1.73
PPFIA3-209ENST00000602783 UNC93B1Q9H1C4 597 aa25.83■■□□□ 1.73
PPFIA3-209ENST00000602783 ZBTB40Q9NUA8 1239 aa25.83■■□□□ 1.73
PPFIA3-209ENST00000602783 TAOK2Q9UL54 1235 aa25.83■■□□□ 1.73
PPFIA3-209ENST00000602783 DOCK3Q8IZD9 2030 aa25.82■■□□□ 1.72
PPFIA3-209ENST00000602783 SHROOM1Q2M3G4 852 aaPredicted RBP25.82■■□□□ 1.72
PPFIA3-209ENST00000602783 HSP90AB4PQ58FF6 505 aa25.82■■□□□ 1.72
PPFIA3-209ENST00000602783 IL1RAPL2Q9NP60 686 aa25.82■■□□□ 1.72
PPFIA3-209ENST00000602783 TMOD4Q9NZQ9 345 aa25.82■■□□□ 1.72
PPFIA3-209ENST00000602783 USP5P45974 858 aa25.81■■□□□ 1.72
PPFIA3-209ENST00000602783 MAP3K12Q12852 859 aa25.81■■□□□ 1.72
PPFIA3-209ENST00000602783 RPAP2Q8IXW5 612 aaPredicted RBP25.81■■□□□ 1.72
PPFIA3-209ENST00000602783 GINM1Q9NU53 330 aa25.81■■□□□ 1.72
PPFIA3-209ENST00000602783 LOC285556D6RIA3 1793 aa25.8■■□□□ 1.72
PPFIA3-209ENST00000602783 INHAP05111 366 aa25.8■■□□□ 1.72
PPFIA3-209ENST00000602783 CERS3Q8IU89 383 aa25.8■■□□□ 1.72
PPFIA3-209ENST00000602783 RHPN1Q8TCX5 695 aa25.8■■□□□ 1.72
PPFIA3-209ENST00000602783 U2AF1L4Q8WU68 220 aaKnown RBP25.8■■□□□ 1.72
PPFIA3-209ENST00000602783 PCDH10Q9P2E7 1040 aa25.8■■□□□ 1.72
PPFIA3-209ENST00000602783 ZBTB21Q9ULJ3 1066 aa25.8■■□□□ 1.72
PPFIA3-209ENST00000602783 C19orf81C9J6K1 198 aa25.79■■□□□ 1.72
PPFIA3-209ENST00000602783 USP17L10C9JJH3 530 aa25.79■■□□□ 1.72
PPFIA3-209ENST00000602783 HMMRO75330 724 aa25.79■■□□□ 1.72
PPFIA3-209ENST00000602783 IRX3P78415 501 aaPredicted RBP25.79■■□□□ 1.72
PPFIA3-209ENST00000602783 C20orf194Q5TEA3 1177 aa25.79■■□□□ 1.72
PPFIA3-209ENST00000602783 SIRT2Q8IXJ6 389 aa25.79■■□□□ 1.72
PPFIA3-209ENST00000602783 DPF3Q92784 378 aa25.79■■□□□ 1.72
PPFIA3-209ENST00000602783 CEP290O15078 2479 aa25.78■■□□□ 1.72
PPFIA3-209ENST00000602783 APBB1O00213 710 aa25.78■■□□□ 1.72
PPFIA3-209ENST00000602783 SGPL1O95470 568 aa25.78■■□□□ 1.72
PPFIA3-209ENST00000602783 HOXA7P31268 230 aaPredicted RBP25.78■■□□□ 1.72
PPFIA3-209ENST00000602783 P2RX7Q99572 595 aaKnown RBP25.78■■□□□ 1.72
PPFIA3-209ENST00000602783 CHMP4BQ9H444 224 aaKnown RBP25.78■■□□□ 1.72
PPFIA3-209ENST00000602783 H0YGN5 161 aa25.77■■□□□ 1.72
PPFIA3-209ENST00000602783 TMED8Q6PL24 325 aaPredicted RBP25.76■■□□□ 1.71
PPFIA3-209ENST00000602783 UBE2Q1Q7Z7E8 422 aa25.76■■□□□ 1.71
PPFIA3-209ENST00000602783 CLASRPQ8N2M8 674 aaKnown RBP25.76■■□□□ 1.71
PPFIA3-209ENST00000602783 BCL11AQ9H165 835 aa25.76■■□□□ 1.71
PPFIA3-209ENST00000602783 MORF4L1Q9UBU8 362 aa25.76■■□□□ 1.71
PPFIA3-209ENST00000602783 COLQQ9Y215 455 aaPredicted RBP25.76■■□□□ 1.71
PPFIA3-209ENST00000602783 GH2P01242 217 aa25.75■■□□□ 1.71
PPFIA3-209ENST00000602783 PDE3AQ14432 1141 aa25.75■■□□□ 1.71
PPFIA3-209ENST00000602783 TTF1Q15361 905 aaPredicted RBP25.75■■□□□ 1.71
PPFIA3-209ENST00000602783 TTC6Q86TZ1 520 aa25.75■■□□□ 1.71
PPFIA3-209ENST00000602783 KIF1BPQ96EK5 621 aa25.75■■□□□ 1.71
PPFIA3-209ENST00000602783 DEFB118Q96PH6 123 aa25.75■■□□□ 1.71
PPFIA3-209ENST00000602783 SERPINB13Q9UIV8 391 aa25.75■■□□□ 1.71
PPFIA3-209ENST00000602783 GJD2Q9UKL4 321 aa25.75■■□□□ 1.71
PPFIA3-209ENST00000602783 MYH1P12882 1939 aa25.75■■□□□ 1.71
PPFIA3-209ENST00000602783 FARP2O94887 1054 aaPredicted RBP25.74■■□□□ 1.71
PPFIA3-209ENST00000602783 TFRCP02786 760 aaKnown RBP25.74■■□□□ 1.71
PPFIA3-209ENST00000602783 HERVK_113P62684 666 aa25.74■■□□□ 1.71
PPFIA3-209ENST00000602783 TATDN1Q6P1N9 297 aa25.74■■□□□ 1.71
PPFIA3-209ENST00000602783 HTATIP2Q9BUP3 242 aa25.74■■□□□ 1.71
PPFIA3-209ENST00000602783 EMILIN3Q9NT22 766 aa25.74■■□□□ 1.71
PPFIA3-209ENST00000602783 PEX10O60683 326 aa25.73■■□□□ 1.71
PPFIA3-209ENST00000602783 USP17L2Q6R6M4 530 aa25.73■■□□□ 1.71
PPFIA3-209ENST00000602783 RIOK1Q9BRS2 568 aaKnown RBP25.73■■□□□ 1.71
PPFIA3-209ENST00000602783 EHD4Q9H223 541 aa25.73■■□□□ 1.71
PPFIA3-209ENST00000602783 MAGEB6P1A0A0J9YX57 407 aa25.72■■□□□ 1.71
PPFIA3-209ENST00000602783 IFIT2P09913 472 aaKnown RBP25.72■■□□□ 1.71
PPFIA3-209ENST00000602783 SLC9C2Q5TAH2 1124 aa25.72■■□□□ 1.71
PPFIA3-209ENST00000602783 GPRC5AQ8NFJ5 357 aa25.72■■□□□ 1.71
PPFIA3-209ENST00000602783 TXNRD2Q9NNW7 524 aa25.72■■□□□ 1.71
PPFIA3-209ENST00000602783 PAK6Q9NQU5 681 aaPredicted RBP25.72■■□□□ 1.71
PPFIA3-209ENST00000602783 NAV1Q8NEY1 1877 aa25.72■■□□□ 1.71
PPFIA3-209ENST00000602783 DDX60LQ5H9U9 1706 aaKnown RBP25.71■■□□□ 1.71
PPFIA3-209ENST00000602783 CERKLQ49MI3 558 aaPredicted RBP25.71■■□□□ 1.71
PPFIA3-209ENST00000602783 DNAJC2Q99543 621 aaKnown RBP25.71■■□□□ 1.71
PPFIA3-209ENST00000602783 RBPJLQ9UBG7 517 aa25.71■■□□□ 1.71
PPFIA3-209ENST00000602783 GOLIM4O00461 696 aa25.7■■□□□ 1.7
PPFIA3-209ENST00000602783 RAB11FIP3O75154 756 aa25.7■■□□□ 1.7
PPFIA3-209ENST00000602783 HMGCRP04035 888 aa25.7■■□□□ 1.7
PPFIA3-209ENST00000602783 POLR3DP05423 398 aaPredicted RBP25.7■■□□□ 1.7
PPFIA3-209ENST00000602783 PDE6AP16499 860 aa25.7■■□□□ 1.7
PPFIA3-209ENST00000602783 CAPN2P17655 700 aa25.7■■□□□ 1.7
PPFIA3-209ENST00000602783 PLCD1P51178 756 aa25.7■■□□□ 1.7
PPFIA3-209ENST00000602783 RAB3GAP1Q15042 981 aa25.7■■□□□ 1.7
PPFIA3-209ENST00000602783 ZYXQ15942 572 aaKnown RBP25.7■■□□□ 1.7
PPFIA3-209ENST00000602783 PPIL4Q8WUA2 492 aaKnown RBP eCLIP25.7■■□□□ 1.7
PPFIA3-209ENST00000602783 ABCB5Q2M3G0 1257 aa25.69■■□□□ 1.7
PPFIA3-209ENST00000602783 Q3C1V9 767 aa25.69■■□□□ 1.7
PPFIA3-209ENST00000602783 FEZ1Q99689 392 aa25.69■■□□□ 1.7
PPFIA3-209ENST00000602783 CRNKL1Q9BZJ0 848 aaKnown RBP25.69■■□□□ 1.7
PPFIA3-209ENST00000602783 XRN2Q9H0D6 950 aaKnown RBP eCLIP25.69■■□□□ 1.7
PPFIA3-209ENST00000602783 CABP5Q9NP86 173 aa25.69■■□□□ 1.7
PPFIA3-209ENST00000602783 ZNF532Q9HCE3 1301 aa25.68■■□□□ 1.7
PPFIA3-209ENST00000602783 CYP2B6P20813 491 aa25.68■■□□□ 1.7
PPFIA3-209ENST00000602783 TRIM32Q13049 653 aa25.68■■□□□ 1.7
PPFIA3-209ENST00000602783 PAGR1Q9BTK6 254 aa25.68■■□□□ 1.7
PPFIA3-209ENST00000602783 CRISPLD2Q9H0B8 497 aa25.68■■□□□ 1.7
PPFIA3-209ENST00000602783 MYH7P12883 1935 aa25.67■■□□□ 1.7
PPFIA3-209ENST00000602783 SHMT1P34896 483 aa25.67■■□□□ 1.7
PPFIA3-209ENST00000602783 FXR1P51114 621 aaKnown RBP eCLIP25.67■■□□□ 1.7
PPFIA3-209ENST00000602783 ERVK-9P63128 1117 aa25.67■■□□□ 1.7
PPFIA3-209ENST00000602783 ERVK-24P63145 666 aa25.67■■□□□ 1.7
PPFIA3-209ENST00000602783 CHRDL2Q6WN34 429 aa25.67■■□□□ 1.7
PPFIA3-209ENST00000602783 CCAR1Q8IX12 1150 aaKnown RBP25.67■■□□□ 1.7
PPFIA3-209ENST00000602783 GTF3C2Q8WUA4 911 aaPredicted RBP25.67■■□□□ 1.7
PPFIA3-209ENST00000602783 EDC3Q96F86 508 aaKnown RBP25.67■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms