RNA–Protein interactions for RNA: ENST00000602516.1

HCG18-244, Transcript of HLA complex group 18, humanhuman

BASIC

Gene HCG18, Length 2,890 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCG18-244ENST00000602516 SCYL1Q96KG9 808 aa8.7□□□□□ -1.02
HCG18-244ENST00000602516 RBSNQ9H1K0 784 aa8.7□□□□□ -1.02
HCG18-244ENST00000602516 COPRSQ9NQ92 184 aa8.7□□□□□ -1.02
HCG18-244ENST00000602516 PRDM11Q9NQV5 511 aa8.7□□□□□ -1.02
HCG18-244ENST00000602516 SNRKQ9NRH2 765 aa8.7□□□□□ -1.02
HCG18-244ENST00000602516 PPFIA3O75145 1194 aa8.7□□□□□ -1.02
HCG18-244ENST00000602516 CASP7P55210 303 aa8.7□□□□□ -1.02
HCG18-244ENST00000602516 FAAH2Q6GMR7 532 aa8.7□□□□□ -1.02
HCG18-244ENST00000602516 AACSQ86V21 672 aa8.7□□□□□ -1.02
HCG18-244ENST00000602516 ZC3H15Q8WU90 426 aaKnown RBP8.7□□□□□ -1.02
HCG18-244ENST00000602516 SNX14Q9Y5W7 946 aa8.7□□□□□ -1.02
HCG18-244ENST00000602516 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP8.7□□□□□ -1.02
HCG18-244ENST00000602516 TNS2Q63HR2 1409 aa8.69□□□□□ -1.02
HCG18-244ENST00000602516 TJP1Q07157 1748 aa8.69□□□□□ -1.02
HCG18-244ENST00000602516 EIF3FO00303 357 aaPredicted RBP8.69□□□□□ -1.02
HCG18-244ENST00000602516 MTA2O94776 668 aa8.69□□□□□ -1.02
HCG18-244ENST00000602516 MLLT3P42568 568 aaPredicted RBP8.69□□□□□ -1.02
HCG18-244ENST00000602516 DBN1Q16643 649 aa8.69□□□□□ -1.02
HCG18-244ENST00000602516 KLHL40Q2TBA0 621 aa8.69□□□□□ -1.02
HCG18-244ENST00000602516 CWC27Q6UX04 472 aaKnown RBP8.69□□□□□ -1.02
HCG18-244ENST00000602516 TOM1L2Q6ZVM7 507 aa8.69□□□□□ -1.02
HCG18-244ENST00000602516 PARP9Q8IXQ6 854 aa8.69□□□□□ -1.02
HCG18-244ENST00000602516 KIF18AQ8NI77 898 aa8.69□□□□□ -1.02
HCG18-244ENST00000602516 RUFY2Q8WXA3 655 aa8.69□□□□□ -1.02
HCG18-244ENST00000602516 TRIM6Q9C030 488 aaPredicted RBP8.69□□□□□ -1.02
HCG18-244ENST00000602516 SENP2Q9HC62 589 aa8.69□□□□□ -1.02
HCG18-244ENST00000602516 COMMD8Q9NX08 183 aa8.69□□□□□ -1.02
HCG18-244ENST00000602516 RRP15Q9Y3B9 282 aaKnown RBP8.69□□□□□ -1.02
HCG18-244ENST00000602516 TOGARAM1Q9Y4F4 1720 aa8.69□□□□□ -1.02
HCG18-244ENST00000602516 NBPF26B4DH59 902 aa8.69□□□□□ -1.02
HCG18-244ENST00000602516 TRIM37O94972 964 aa8.69□□□□□ -1.02
HCG18-244ENST00000602516 ATN1P54259 1190 aaPredicted RBP8.69□□□□□ -1.02
HCG18-244ENST00000602516 USP4Q13107 963 aa8.69□□□□□ -1.02
HCG18-244ENST00000602516 NBPF14Q5TI25 921 aa8.69□□□□□ -1.02
HCG18-244ENST00000602516 LMNTD2Q8IXW0 634 aa8.69□□□□□ -1.02
HCG18-244ENST00000602516 NBPF15Q8N660 670 aa8.69□□□□□ -1.02
HCG18-244ENST00000602516 C3orf20Q8ND61 904 aa8.69□□□□□ -1.02
HCG18-244ENST00000602516 GABPB2Q8TAK5 448 aaPredicted RBP8.69□□□□□ -1.02
HCG18-244ENST00000602516 SYAP1Q96A49 352 aaPredicted RBP8.69□□□□□ -1.02
HCG18-244ENST00000602516 TTC14Q96N46 770 aa8.69□□□□□ -1.02
HCG18-244ENST00000602516 QTRT2Q9H974 415 aaKnown RBP8.69□□□□□ -1.02
HCG18-244ENST00000602516 ATP8A1Q9Y2Q0 1164 aa8.69□□□□□ -1.02
HCG18-244ENST00000602516 HARSP12081 509 aaKnown RBP8.68□□□□□ -1.02
HCG18-244ENST00000602516 IL2RBP14784 551 aa8.68□□□□□ -1.02
HCG18-244ENST00000602516 NASPP49321 788 aaPredicted RBP8.68□□□□□ -1.02
HCG18-244ENST00000602516 PTPN12Q05209 780 aaKnown RBP8.68□□□□□ -1.02
HCG18-244ENST00000602516 WASHC5Q12768 1159 aa8.68□□□□□ -1.02
HCG18-244ENST00000602516 IQCB1Q15051 598 aa8.68□□□□□ -1.02
HCG18-244ENST00000602516 PPP2R5BQ15173 497 aa8.68□□□□□ -1.02
HCG18-244ENST00000602516 AGAP9Q5VTM2 703 aa8.68□□□□□ -1.02
HCG18-244ENST00000602516 ARHGAP27Q6ZUM4 889 aa8.68□□□□□ -1.02
HCG18-244ENST00000602516 HDAC7Q8WUI4 952 aa8.68□□□□□ -1.02
HCG18-244ENST00000602516 VMP1Q96GC9 406 aa8.68□□□□□ -1.02
HCG18-244ENST00000602516 DDX27Q96GQ7 796 aaKnown RBP8.68□□□□□ -1.02
HCG18-244ENST00000602516 PHACTR1Q9C0D0 580 aa8.68□□□□□ -1.02
HCG18-244ENST00000602516 ODF2LQ9ULJ1 636 aa8.68□□□□□ -1.02
HCG18-244ENST00000602516 HIP1RO75146 1068 aa8.68□□□□□ -1.02
HCG18-244ENST00000602516 RRM1P23921 792 aa8.68□□□□□ -1.02
HCG18-244ENST00000602516 PIP4K2AP48426 406 aaPredicted RBP8.68□□□□□ -1.02
HCG18-244ENST00000602516 RAB27AP51159 221 aa8.68□□□□□ -1.02
HCG18-244ENST00000602516 ZCCHC8Q6NZY4 707 aaKnown RBP8.68□□□□□ -1.02
HCG18-244ENST00000602516 USP33Q8TEY7 942 aa8.68□□□□□ -1.02
HCG18-244ENST00000602516 UPF3BQ9BZI7 483 aaKnown RBP8.68□□□□□ -1.02
HCG18-244ENST00000602516 ALDH8A1Q9H2A2 487 aaPredicted RBP8.68□□□□□ -1.02
HCG18-244ENST00000602516 DIAPH3Q9NSV4 1193 aa8.68□□□□□ -1.02
HCG18-244ENST00000602516 LMBRD1Q9NUN5 540 aa8.68□□□□□ -1.02
HCG18-244ENST00000602516 IP6K2Q9UHH9 426 aa8.68□□□□□ -1.02
HCG18-244ENST00000602516 TMCC3Q9ULS5 477 aa8.68□□□□□ -1.02
HCG18-244ENST00000602516 SLC45A1Q9Y2W3 748 aa8.68□□□□□ -1.02
HCG18-244ENST00000602516 TMEM110-MUSTN1A8MSY1 372 aa8.67□□□□□ -1.02
HCG18-244ENST00000602516 HIP1O00291 1037 aa8.67□□□□□ -1.02
HCG18-244ENST00000602516 RTN2O75298 545 aa8.67□□□□□ -1.02
HCG18-244ENST00000602516 CPP00450 1065 aa8.67□□□□□ -1.02
HCG18-244ENST00000602516 MPP3Q13368 585 aa8.67□□□□□ -1.02
HCG18-244ENST00000602516 ARMC9Q7Z3E5 817 aa8.67□□□□□ -1.02
HCG18-244ENST00000602516 KLHDC4Q8TBB5 520 aa8.67□□□□□ -1.02
HCG18-244ENST00000602516 CCDC8Q9H0W5 538 aaPredicted RBP8.67□□□□□ -1.02
HCG18-244ENST00000602516 CD248Q9HCU0 757 aa8.67□□□□□ -1.02
HCG18-244ENST00000602516 TLR7Q9NYK1 1049 aaKnown RBP8.67□□□□□ -1.02
HCG18-244ENST00000602516 TFIP11Q9UBB9 837 aaKnown RBP8.67□□□□□ -1.02
HCG18-244ENST00000602516 JCADQ9P266 1359 aa8.67□□□□□ -1.02
HCG18-244ENST00000602516 H7C1W4 665 aa8.67□□□□□ -1.02
HCG18-244ENST00000602516 PTH1RQ03431 593 aa8.67□□□□□ -1.02
HCG18-244ENST00000602516 TMED1Q13445 227 aa8.67□□□□□ -1.02
HCG18-244ENST00000602516 NECTIN1Q15223 517 aa8.67□□□□□ -1.02
HCG18-244ENST00000602516 SYCP1Q15431 976 aa8.67□□□□□ -1.02
HCG18-244ENST00000602516 MCTP1Q6DN14 999 aa8.67□□□□□ -1.02
HCG18-244ENST00000602516 SPATA21Q7Z572 469 aa8.67□□□□□ -1.02
HCG18-244ENST00000602516 TXLNBQ8N3L3 684 aa8.67□□□□□ -1.02
HCG18-244ENST00000602516 LARGE2Q8N3Y3 721 aa8.67□□□□□ -1.02
HCG18-244ENST00000602516 ZNF512BQ96KM6 892 aaPredicted RBP8.67□□□□□ -1.02
HCG18-244ENST00000602516 V9GYY5 206 aaPredicted RBP8.67□□□□□ -1.02
HCG18-244ENST00000602516 A0A087WZG4 1122 aa8.67□□□□□ -1.02
HCG18-244ENST00000602516 IQCJ-SCHIP1C9J366 451 aaPredicted RBP8.67□□□□□ -1.02
HCG18-244ENST00000602516 RDXP35241 583 aaKnown RBP8.67□□□□□ -1.02
HCG18-244ENST00000602516 KIF4BQ2VIQ3 1234 aa8.67□□□□□ -1.02
HCG18-244ENST00000602516 UBE3BQ7Z3V4 1068 aa8.67□□□□□ -1.02
HCG18-244ENST00000602516 MPP4Q96JB8 637 aa8.67□□□□□ -1.02
HCG18-244ENST00000602516 TM6SF1Q9BZW5 370 aa8.67□□□□□ -1.02
HCG18-244ENST00000602516 SIL1Q9H173 461 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms