RNA–Protein interactions for RNA: ENST00000602204.1

SIN3B-212, Transcript of SIN3 transcription regulator family member B, humanhuman

TSL 2

Gene SIN3B, Length 517 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3B-212ENST00000602204 CNTNAP1P78357 1384 aa23.17■■□□□ 1.3
SIN3B-212ENST00000602204 CCDC69A6NI79 296 aa23.17■■□□□ 1.3
SIN3B-212ENST00000602204 TFAP4Q01664 338 aa23.17■■□□□ 1.3
SIN3B-212ENST00000602204 ST3GAL1Q11201 340 aa23.17■■□□□ 1.3
SIN3B-212ENST00000602204 TCP10Q12799 353 aa23.17■■□□□ 1.3
SIN3B-212ENST00000602204 KIF4BQ2VIQ3 1234 aa23.17■■□□□ 1.3
SIN3B-212ENST00000602204 APOA5Q6Q788 366 aa23.17■■□□□ 1.3
SIN3B-212ENST00000602204 SH3BP5LQ7L8J4 393 aa23.17■■□□□ 1.3
SIN3B-212ENST00000602204 ZFPM1Q8IX07 1006 aa23.17■■□□□ 1.3
SIN3B-212ENST00000602204 ENAHQ8N8S7 591 aaPredicted RBP23.17■■□□□ 1.3
SIN3B-212ENST00000602204 NEDD1Q8NHV4 660 aa23.17■■□□□ 1.3
SIN3B-212ENST00000602204 ANKS1AQ92625 1134 aa23.17■■□□□ 1.3
SIN3B-212ENST00000602204 BRPF3Q9ULD4 1205 aa23.17■■□□□ 1.3
SIN3B-212ENST00000602204 GOLGB1Q14789 3259 aaKnown RBP23.16■■□□□ 1.3
SIN3B-212ENST00000602204 SHTN1A0MZ66 631 aa23.16■■□□□ 1.3
SIN3B-212ENST00000602204 CLRN2A0PK11 232 aa23.16■■□□□ 1.3
SIN3B-212ENST00000602204 DDTLA6NHG4 134 aaPredicted RBP23.16■■□□□ 1.3
SIN3B-212ENST00000602204 TSPY3P0CV98 308 aa23.16■■□□□ 1.3
SIN3B-212ENST00000602204 TSPY8P0CW00 308 aa23.16■■□□□ 1.3
SIN3B-212ENST00000602204 NBPF9Q3BBW0 867 aa23.16■■□□□ 1.3
SIN3B-212ENST00000602204 SYNE3Q6ZMZ3 975 aa23.16■■□□□ 1.3
SIN3B-212ENST00000602204 NFXL1Q6ZNB6 911 aa23.16■■□□□ 1.3
SIN3B-212ENST00000602204 DGKHQ86XP1 1220 aa23.16■■□□□ 1.3
SIN3B-212ENST00000602204 ZSCAN29Q8IWY8 852 aaPredicted RBP23.16■■□□□ 1.3
SIN3B-212ENST00000602204 SLC44A5Q8NCS7 719 aa23.16■■□□□ 1.3
SIN3B-212ENST00000602204 CCDC17Q96LX7 622 aa23.16■■□□□ 1.3
SIN3B-212ENST00000602204 HERC5Q9UII4 1024 aaKnown RBP23.16■■□□□ 1.3
SIN3B-212ENST00000602204 ATAD5Q96QE3 1844 aa23.15■■□□□ 1.3
SIN3B-212ENST00000602204 GOLGA8BA8MQT2 603 aa23.15■■□□□ 1.3
SIN3B-212ENST00000602204 TCP10L2B9ZVM9 353 aa23.15■■□□□ 1.3
SIN3B-212ENST00000602204 DHX16O60231 1041 aaKnown RBP23.15■■□□□ 1.3
SIN3B-212ENST00000602204 PPP2R5BQ15173 497 aa23.15■■□□□ 1.3
SIN3B-212ENST00000602204 FAM47AQ5JRC9 791 aa23.15■■□□□ 1.3
SIN3B-212ENST00000602204 PPP4R3BQ5MIZ7 849 aa23.15■■□□□ 1.3
SIN3B-212ENST00000602204 NECAB1Q8N987 351 aa23.15■■□□□ 1.3
SIN3B-212ENST00000602204 VEZTQ9HBM0 779 aa23.15■■□□□ 1.3
SIN3B-212ENST00000602204 SMC3Q9UQE7 1217 aa23.15■■□□□ 1.3
SIN3B-212ENST00000602204 SLC12A7Q9Y666 1083 aa23.15■■□□□ 1.3
SIN3B-212ENST00000602204 ZBTB43O43298 467 aa23.14■■□□□ 1.29
SIN3B-212ENST00000602204 PDIA4P13667 645 aaKnown RBP23.14■■□□□ 1.29
SIN3B-212ENST00000602204 SHMT1P34896 483 aa23.14■■□□□ 1.29
SIN3B-212ENST00000602204 SCRN1Q12765 414 aa23.14■■□□□ 1.29
SIN3B-212ENST00000602204 IFIT1BQ5T764 474 aaKnown RBP23.14■■□□□ 1.29
SIN3B-212ENST00000602204 CRACR2BQ8N4Y2 399 aaPredicted RBP23.14■■□□□ 1.29
SIN3B-212ENST00000602204 ZKSCAN3Q9BRR0 538 aa23.14■■□□□ 1.29
SIN3B-212ENST00000602204 TRIM34Q9BYJ4 488 aa23.14■■□□□ 1.29
SIN3B-212ENST00000602204 FOXD4L1Q9NU39 408 aa23.14■■□□□ 1.29
SIN3B-212ENST00000602204 HPS5Q9UPZ3 1129 aa23.14■■□□□ 1.29
SIN3B-212ENST00000602204 CALM1P0DP23 149 aa23.13■■□□□ 1.29
SIN3B-212ENST00000602204 CALM2P0DP24 149 aa23.13■■□□□ 1.29
SIN3B-212ENST00000602204 CALM3P0DP25 149 aa23.13■■□□□ 1.29
SIN3B-212ENST00000602204 LMOD1P29536 600 aaPredicted RBP23.13■■□□□ 1.29
SIN3B-212ENST00000602204 NOVP48745 357 aa23.13■■□□□ 1.29
SIN3B-212ENST00000602204 STK3Q13188 491 aa23.13■■□□□ 1.29
SIN3B-212ENST00000602204 DPY19L2Q6NUT2 758 aa23.13■■□□□ 1.29
SIN3B-212ENST00000602204 TATDN1Q6P1N9 297 aa23.13■■□□□ 1.29
SIN3B-212ENST00000602204 SAMD7Q7Z3H4 446 aa23.13■■□□□ 1.29
SIN3B-212ENST00000602204 L3MBTL3Q96JM7 780 aaPredicted RBP23.13■■□□□ 1.29
SIN3B-212ENST00000602204 WDR90Q96KV7 1748 aa23.13■■□□□ 1.29
SIN3B-212ENST00000602204 TBC1D12O60347 775 aa23.12■■□□□ 1.29
SIN3B-212ENST00000602204 DDAH1O94760 285 aa23.12■■□□□ 1.29
SIN3B-212ENST00000602204 METAP2P50579 478 aaKnown RBP eCLIP23.12■■□□□ 1.29
SIN3B-212ENST00000602204 NUCB2P80303 420 aa23.12■■□□□ 1.29
SIN3B-212ENST00000602204 TBC1D10BQ4KMP7 808 aaPredicted RBP23.12■■□□□ 1.29
SIN3B-212ENST00000602204 APOBEC3FQ8IUX4 373 aaKnown RBP23.12■■□□□ 1.29
SIN3B-212ENST00000602204 ZNF654Q8IZM8 581 aa23.12■■□□□ 1.29
SIN3B-212ENST00000602204 CSRNP1Q96S65 589 aa23.12■■□□□ 1.29
SIN3B-212ENST00000602204 DNAJC18Q9H819 358 aa23.12■■□□□ 1.29
SIN3B-212ENST00000602204 SENP2Q9HC62 589 aa23.12■■□□□ 1.29
SIN3B-212ENST00000602204 NAP1L2Q9ULW6 460 aaPredicted RBP23.12■■□□□ 1.29
SIN3B-212ENST00000602204 EGFRP00533 1210 aa23.11■■□□□ 1.29
SIN3B-212ENST00000602204 HMGN5P82970 282 aaKnown RBP23.11■■□□□ 1.29
SIN3B-212ENST00000602204 RBM26Q5T8P6 1007 aaKnown RBP23.11■■□□□ 1.29
SIN3B-212ENST00000602204 RCSD1Q6JBY9 416 aa23.11■■□□□ 1.29
SIN3B-212ENST00000602204 CATIPQ7Z7H3 387 aa23.11■■□□□ 1.29
SIN3B-212ENST00000602204 SMARCC2Q8TAQ2 1214 aa23.11■■□□□ 1.29
SIN3B-212ENST00000602204 IL17RBQ9NRM6 502 aa23.11■■□□□ 1.29
SIN3B-212ENST00000602204 ADARB2Q9NS39 739 aaKnown RBP23.11■■□□□ 1.29
SIN3B-212ENST00000602204 PGAP2Q9UHJ9 254 aa23.11■■□□□ 1.29
SIN3B-212ENST00000602204 PITPNM2Q9BZ72 1349 aa23.1■■□□□ 1.29
SIN3B-212ENST00000602204 IGKV6D-41A0A0C4DH26 115 aa23.1■■□□□ 1.29
SIN3B-212ENST00000602204 CCDC196A0A1B0GTZ2 297 aa23.1■■□□□ 1.29
SIN3B-212ENST00000602204 DDNO94850 711 aaPredicted RBP23.1■■□□□ 1.29
SIN3B-212ENST00000602204 CPLX2Q6PUV4 134 aaKnown RBP23.1■■□□□ 1.29
SIN3B-212ENST00000602204 MAP3K14Q99558 947 aa23.1■■□□□ 1.29
SIN3B-212ENST00000602204 KIF3AQ9Y496 699 aa23.1■■□□□ 1.29
SIN3B-212ENST00000602204 GOLGA8AA7E2F4 631 aa23.09■■□□□ 1.29
SIN3B-212ENST00000602204 CDKL5O76039 1030 aa23.09■■□□□ 1.29
SIN3B-212ENST00000602204 CCT2P78371 535 aaKnown RBP23.09■■□□□ 1.29
SIN3B-212ENST00000602204 MAP3K10Q02779 954 aa23.09■■□□□ 1.29
SIN3B-212ENST00000602204 MICU3Q86XE3 530 aa23.09■■□□□ 1.29
SIN3B-212ENST00000602204 NSUN7Q8NE18 718 aaKnown RBP23.09■■□□□ 1.29
SIN3B-212ENST00000602204 HACL1Q9UJ83 578 aa23.09■■□□□ 1.29
SIN3B-212ENST00000602204 PPP2R3BQ9Y5P8 575 aa23.09■■□□□ 1.29
SIN3B-212ENST00000602204 AKR1B1P15121 316 aa23.08■■□□□ 1.29
SIN3B-212ENST00000602204 PDCP20941 246 aa23.08■■□□□ 1.29
SIN3B-212ENST00000602204 GJB2P29033 226 aa23.08■■□□□ 1.29
SIN3B-212ENST00000602204 EPS15P42566 896 aa23.08■■□□□ 1.29
SIN3B-212ENST00000602204 TRPM4Q8TD43 1214 aa23.08■■□□□ 1.29
SIN3B-212ENST00000602204 KAT14Q9H8E8 782 aa23.08■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms