RNA–Protein interactions for RNA: ENST00000602164.5

USF2-215, Transcript of upstream transcription factor 2, c-fos interacting, human

TSL 3

Gene USF2, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
USF2-215	ENST00000602164	ZBTB21	Q9ULJ3	1066 aa		32.2	■■■□□ 2.75
USF2-215	ENST00000602164	TRIM6-TRIM34	B2RNG4	842 aa		32.19	■■■□□ 2.74
USF2-215	ENST00000602164	ASNS	P08243	561 aa		32.19	■■■□□ 2.74
USF2-215	ENST00000602164	OTUD7B	Q6GQQ9	843 aa		32.19	■■■□□ 2.74
USF2-215	ENST00000602164	GIMAP6	Q6P9H5	292 aa		32.19	■■■□□ 2.74
USF2-215	ENST00000602164	CTR9	Q6PD62	1173 aa		32.19	■■■□□ 2.74
USF2-215	ENST00000602164	CASP8AP2	Q9UKL3	1982 aa		32.18	■■■□□ 2.74
USF2-215	ENST00000602164	GNAT2	P19087	354 aa		32.18	■■■□□ 2.74
USF2-215	ENST00000602164	NOM1	Q5C9Z4	860 aa	Known RBP	32.18	■■■□□ 2.74
USF2-215	ENST00000602164	DYNLL2	Q96FJ2	89 aa		32.18	■■■□□ 2.74
USF2-215	ENST00000602164	ZCCHC17	Q9NP64	241 aa	Known RBP	32.18	■■■□□ 2.74
USF2-215	ENST00000602164	TAOK2	Q9UL54	1235 aa		32.18	■■■□□ 2.74
USF2-215	ENST00000602164	USP17L5	A8MUK1	530 aa		32.17	■■■□□ 2.74
USF2-215	ENST00000602164	FOXP2	O15409	715 aa		32.17	■■■□□ 2.74
USF2-215	ENST00000602164	CRHR2	Q13324	411 aa		32.17	■■■□□ 2.74
USF2-215	ENST00000602164	SLC44A5	Q8NCS7	719 aa		32.17	■■■□□ 2.74
USF2-215	ENST00000602164	DDRGK1	Q96HY6	314 aa		32.17	■■■□□ 2.74
USF2-215	ENST00000602164	TBC1D2	Q9BYX2	928 aa		32.17	■■■□□ 2.74
USF2-215	ENST00000602164		A0A0D9SFI3	127 aa		32.16	■■■□□ 2.74
USF2-215	ENST00000602164	TRIM75P	A6NK02	468 aa		32.16	■■■□□ 2.74
USF2-215	ENST00000602164	SBK1	Q52WX2	424 aa		32.16	■■■□□ 2.74
USF2-215	ENST00000602164	GPAT2	Q6NUI2	795 aa		32.16	■■■□□ 2.74
USF2-215	ENST00000602164	CCDC129	Q6ZRS4	1044 aa		32.16	■■■□□ 2.74
USF2-215	ENST00000602164	ANKRD23	Q86SG2	305 aa		32.16	■■■□□ 2.74
USF2-215	ENST00000602164	RILPL2	Q969X0	211 aa		32.16	■■■□□ 2.74
USF2-215	ENST00000602164	FAM227B	Q96M60	508 aa		32.16	■■■□□ 2.74
USF2-215	ENST00000602164	ARPP21	Q9UBL0	812 aa	Predicted RBP	32.16	■■■□□ 2.74
USF2-215	ENST00000602164	LOC285556	D6RIA3	1793 aa		32.16	■■■□□ 2.74
USF2-215	ENST00000602164	GSPT1	P15170	499 aa	Known RBP	32.15	■■■□□ 2.74
USF2-215	ENST00000602164	ZNF280C	Q8ND82	737 aa		32.15	■■■□□ 2.74
USF2-215	ENST00000602164	WDR18	Q9BV38	432 aa		32.15	■■■□□ 2.74
USF2-215	ENST00000602164	HELLS	Q9NRZ9	838 aa		32.15	■■■□□ 2.74
USF2-215	ENST00000602164	GPR25	O00155	361 aa		32.14	■■■□□ 2.74
USF2-215	ENST00000602164	GH2	P01242	217 aa		32.14	■■■□□ 2.74
USF2-215	ENST00000602164	SPP2	Q13103	211 aa		32.14	■■■□□ 2.74
USF2-215	ENST00000602164	CERKL	Q49MI3	558 aa	Predicted RBP	32.14	■■■□□ 2.74
USF2-215	ENST00000602164	TTC22	Q5TAA0	569 aa		32.14	■■■□□ 2.74
USF2-215	ENST00000602164	SWAP70	Q9UH65	585 aa		32.14	■■■□□ 2.74
USF2-215	ENST00000602164	PATL2	C9JE40	543 aa	Known RBP	32.13	■■■□□ 2.73
USF2-215	ENST00000602164	NMI	Q13287	307 aa	Predicted RBP	32.13	■■■□□ 2.73
USF2-215	ENST00000602164	C16orf86	Q6ZW13	317 aa		32.13	■■■□□ 2.73
USF2-215	ENST00000602164	CENPQ	Q7L2Z9	268 aa	Predicted RBP	32.13	■■■□□ 2.73
USF2-215	ENST00000602164	ROBO3	Q96MS0	1386 aa		32.13	■■■□□ 2.73
USF2-215	ENST00000602164	SDS	P20132	328 aa		32.12	■■■□□ 2.73
USF2-215	ENST00000602164	TAF1C	Q15572	869 aa	Predicted RBP	32.12	■■■□□ 2.73
USF2-215	ENST00000602164	AMOTL1	Q8IY63	956 aa		32.12	■■■□□ 2.73
USF2-215	ENST00000602164	IFNL3	Q8IZI9	196 aa		32.12	■■■□□ 2.73
USF2-215	ENST00000602164	ZNF296	Q8WUU4	475 aa	Predicted RBP	32.12	■■■□□ 2.73
USF2-215	ENST00000602164	AS3MT	Q9HBK9	375 aa		32.12	■■■□□ 2.73
USF2-215	ENST00000602164	MYH8	P13535	1937 aa		32.12	■■■□□ 2.73
USF2-215	ENST00000602164	GUCY1A2	P33402	732 aa		32.11	■■■□□ 2.73
USF2-215	ENST00000602164	ABCB5	Q2M3G0	1257 aa		32.11	■■■□□ 2.73
USF2-215	ENST00000602164	FASTKD5	Q7L8L6	764 aa	Known RBP	32.11	■■■□□ 2.73
USF2-215	ENST00000602164	CDK8	P49336	464 aa		32.1	■■■□□ 2.73
USF2-215	ENST00000602164	SH3D19	Q5HYK7	790 aa		32.1	■■■□□ 2.73
USF2-215	ENST00000602164	ADGRA2	Q96PE1	1338 aa		32.09	■■■□□ 2.73
USF2-215	ENST00000602164	PDHX	O00330	501 aa		32.09	■■■□□ 2.73
USF2-215	ENST00000602164	CENPB	P07199	599 aa	Predicted RBP	32.09	■■■□□ 2.73
USF2-215	ENST00000602164	TDO2	P48775	406 aa		32.09	■■■□□ 2.73
USF2-215	ENST00000602164	MCMDC2	Q4G0Z9	681 aa		32.09	■■■□□ 2.73
USF2-215	ENST00000602164	VPS53	Q5VIR6	699 aa		32.09	■■■□□ 2.73
USF2-215	ENST00000602164	ZNF589	Q86UQ0	364 aa	Predicted RBP	32.09	■■■□□ 2.73
USF2-215	ENST00000602164	APP	P05067	770 aa		32.08	■■■□□ 2.73
USF2-215	ENST00000602164	DGKZ	Q13574	1117 aa		32.08	■■■□□ 2.73
USF2-215	ENST00000602164	GADL1	Q6ZQY3	521 aa		32.08	■■■□□ 2.73
USF2-215	ENST00000602164	ZFYVE28	Q9HCC9	887 aa		32.08	■■■□□ 2.73
USF2-215	ENST00000602164	HMGCS2	P54868	508 aa		32.07	■■■□□ 2.72
USF2-215	ENST00000602164	BACE1	P56817	501 aa		32.07	■■■□□ 2.72
USF2-215	ENST00000602164	MTMR2	Q13614	643 aa		32.07	■■■□□ 2.72
USF2-215	ENST00000602164	PROCA1	Q8NCQ7	364 aa	Predicted RBP	32.07	■■■□□ 2.72
USF2-215	ENST00000602164	TREML2	Q5T2D2	321 aa		32.06	■■■□□ 2.72
USF2-215	ENST00000602164	NACAP1	Q9BZK3	213 aa		32.06	■■■□□ 2.72
USF2-215	ENST00000602164	CABP5	Q9NP86	173 aa		32.06	■■■□□ 2.72
USF2-215	ENST00000602164	AGTPBP1	Q9UPW5	1226 aa		32.06	■■■□□ 2.72
USF2-215	ENST00000602164	SLC45A1	Q9Y2W3	748 aa		32.06	■■■□□ 2.72
USF2-215	ENST00000602164	GREB1L	Q9C091	1923 aa	Predicted RBP	32.05	■■■□□ 2.72
USF2-215	ENST00000602164	MINDY4B	A8MYZ0	360 aa		32.05	■■■□□ 2.72
USF2-215	ENST00000602164	TLR2	O60603	784 aa		32.05	■■■□□ 2.72
USF2-215	ENST00000602164	FKTN	O75072	461 aa		32.05	■■■□□ 2.72
USF2-215	ENST00000602164	NEFL	P07196	543 aa		32.05	■■■□□ 2.72
USF2-215	ENST00000602164	AKR1B1	P15121	316 aa		32.05	■■■□□ 2.72
USF2-215	ENST00000602164	SEPT2	Q15019	361 aa		32.05	■■■□□ 2.72
USF2-215	ENST00000602164	RAB3GAP1	Q15042	981 aa		32.05	■■■□□ 2.72
USF2-215	ENST00000602164	CCDC171	Q6TFL3	1326 aa		32.04	■■■□□ 2.72
USF2-215	ENST00000602164	NAPB	Q9H115	298 aa		32.04	■■■□□ 2.72
USF2-215	ENST00000602164	USP17L10	C9JJH3	530 aa		32.03	■■■□□ 2.72
USF2-215	ENST00000602164	TMEM179	Q6ZVK1	233 aa		32.03	■■■□□ 2.72
USF2-215	ENST00000602164	TNS4	Q8IZW8	715 aa		32.03	■■■□□ 2.72
USF2-215	ENST00000602164	CCDC17	Q96LX7	622 aa		32.03	■■■□□ 2.72
USF2-215	ENST00000602164	C19orf81	C9J6K1	198 aa		32.02	■■■□□ 2.72
USF2-215	ENST00000602164	HIP1	O00291	1037 aa		32.02	■■■□□ 2.72
USF2-215	ENST00000602164	ALX1	Q15699	326 aa		32.02	■■■□□ 2.72
USF2-215	ENST00000602164	ACER1	Q8TDN7	264 aa		32.02	■■■□□ 2.72
USF2-215	ENST00000602164	PARK7	Q99497	189 aa	Known RBP	32.02	■■■□□ 2.72
USF2-215	ENST00000602164	DIAPH3	Q9NSV4	1193 aa		32.02	■■■□□ 2.72
USF2-215	ENST00000602164	MPHOSPH10	O00566	681 aa	Known RBP	32.01	■■■□□ 2.71
USF2-215	ENST00000602164	CYP2C8	P10632	490 aa		32.01	■■■□□ 2.71
USF2-215	ENST00000602164	RASA1	P20936	1047 aa		32.01	■■■□□ 2.71
USF2-215	ENST00000602164	SKAP1	Q86WV1	359 aa		32.01	■■■□□ 2.71
USF2-215	ENST00000602164	EMILIN3	Q9NT22	766 aa		32.01	■■■□□ 2.71

Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms