RNA–Protein interactions for RNA: ENST00000602088.7

SSBP4-213, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 622 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-213ENST00000602088 FASTKD5Q7L8L6 764 aaKnown RBP20.1■□□□□ 0.81
SSBP4-213ENST00000602088 ZNF280CQ8ND82 737 aa20.1■□□□□ 0.81
SSBP4-213ENST00000602088 ZFYVE28Q9HCC9 887 aa20.1■□□□□ 0.81
SSBP4-213ENST00000602088 ZBTB21Q9ULJ3 1066 aa20.1■□□□□ 0.81
SSBP4-213ENST00000602088 BAZ2AQ9UIF9 1905 aaKnown RBP20.1■□□□□ 0.81
SSBP4-213ENST00000602088 GSG1L2A8MUP6 293 aa20.09■□□□□ 0.81
SSBP4-213ENST00000602088 USP17L12C9JPN9 530 aa20.09■□□□□ 0.81
SSBP4-213ENST00000602088 USP17L21D6R901 530 aa20.09■□□□□ 0.81
SSBP4-213ENST00000602088 GPAA1O43292 621 aa20.09■□□□□ 0.81
SSBP4-213ENST00000602088 FKTNO75072 461 aa20.09■□□□□ 0.81
SSBP4-213ENST00000602088 CYP2D6P10635 497 aa20.09■□□□□ 0.81
SSBP4-213ENST00000602088 SHMT1P34896 483 aa20.09■□□□□ 0.81
SSBP4-213ENST00000602088 SPP2Q13103 211 aa20.09■□□□□ 0.81
SSBP4-213ENST00000602088 C12orf60Q5U649 245 aa20.09■□□□□ 0.81
SSBP4-213ENST00000602088 DDRGK1Q96HY6 314 aa20.09■□□□□ 0.81
SSBP4-213ENST00000602088 SEC62Q99442 399 aaKnown RBP20.09■□□□□ 0.81
SSBP4-213ENST00000602088 WDR18Q9BV38 432 aa20.09■□□□□ 0.81
SSBP4-213ENST00000602088 PTPRFP10586 1907 aa20.09■□□□□ 0.81
SSBP4-213ENST00000602088 PDHXO00330 501 aa20.08■□□□□ 0.81
SSBP4-213ENST00000602088 GNAT2P19087 354 aa20.08■□□□□ 0.81
SSBP4-213ENST00000602088 CERKLQ49MI3 558 aaPredicted RBP20.08■□□□□ 0.81
SSBP4-213ENST00000602088 GIMAP6Q6P9H5 292 aa20.08■□□□□ 0.81
SSBP4-213ENST00000602088 CTR9Q6PD62 1173 aa20.08■□□□□ 0.81
SSBP4-213ENST00000602088 TICAM2Q86XR7 235 aa20.08■□□□□ 0.81
SSBP4-213ENST00000602088 AS3MTQ9HBK9 375 aa20.08■□□□□ 0.81
SSBP4-213ENST00000602088 TAOK2Q9UL54 1235 aa20.08■□□□□ 0.81
SSBP4-213ENST00000602088 CYP2D7A0A087X1C5 515 aa20.07■□□□□ 0.8
SSBP4-213ENST00000602088 GH2P01242 217 aa20.07■□□□□ 0.8
SSBP4-213ENST00000602088 GADL1Q6ZQY3 521 aa20.07■□□□□ 0.8
SSBP4-213ENST00000602088 AMOTL1Q8IY63 956 aa20.07■□□□□ 0.8
SSBP4-213ENST00000602088 DYNLL2Q96FJ2 89 aa20.07■□□□□ 0.8
SSBP4-213ENST00000602088 TRIM6-TRIM34B2RNG4 842 aa20.06■□□□□ 0.8
SSBP4-213ENST00000602088 TLR2O60603 784 aa20.06■□□□□ 0.8
SSBP4-213ENST00000602088 PDE4AP27815 886 aa20.06■□□□□ 0.8
SSBP4-213ENST00000602088 DGKZQ13574 1117 aa20.06■□□□□ 0.8
SSBP4-213ENST00000602088 ABCB5Q2M3G0 1257 aa20.06■□□□□ 0.8
SSBP4-213ENST00000602088 SH3D19Q5HYK7 790 aa20.06■□□□□ 0.8
SSBP4-213ENST00000602088 SWAP70Q9UH65 585 aa20.06■□□□□ 0.8
SSBP4-213ENST00000602088 PATL2C9JE40 543 aaKnown RBP20.05■□□□□ 0.8
SSBP4-213ENST00000602088 SMIM22K7EJ46 135 aa20.05■□□□□ 0.8
SSBP4-213ENST00000602088 SBK1Q52WX2 424 aa20.05■□□□□ 0.8
SSBP4-213ENST00000602088 CTU1Q7Z7A3 348 aaKnown RBP20.05■□□□□ 0.8
SSBP4-213ENST00000602088 PROCA1Q8NCQ7 364 aaPredicted RBP20.05■□□□□ 0.8
SSBP4-213ENST00000602088 MCOLN1Q9GZU1 580 aa20.05■□□□□ 0.8
SSBP4-213ENST00000602088 EPB41L4AQ9HCS5 686 aaPredicted RBP20.05■□□□□ 0.8
SSBP4-213ENST00000602088 CABP5Q9NP86 173 aa20.05■□□□□ 0.8
SSBP4-213ENST00000602088 ARPP21Q9UBL0 812 aaPredicted RBP20.05■□□□□ 0.8
SSBP4-213ENST00000602088 SLC45A1Q9Y2W3 748 aa20.05■□□□□ 0.8
SSBP4-213ENST00000602088 HMGCS2P54868 508 aa20.04■□□□□ 0.8
SSBP4-213ENST00000602088 BACE1P56817 501 aa20.04■□□□□ 0.8
SSBP4-213ENST00000602088 SP3Q02447 781 aa20.04■□□□□ 0.8
SSBP4-213ENST00000602088 C16orf86Q6ZW13 317 aa20.04■□□□□ 0.8
SSBP4-213ENST00000602088 SLC44A5Q8NCS7 719 aa20.04■□□□□ 0.8
SSBP4-213ENST00000602088 RILPL2Q969X0 211 aa20.04■□□□□ 0.8
SSBP4-213ENST00000602088 AGTPBP1Q9UPW5 1226 aa20.04■□□□□ 0.8
SSBP4-213ENST00000602088 USP17L10C9JJH3 530 aa20.03■□□□□ 0.8
SSBP4-213ENST00000602088 APPP05067 770 aa20.03■□□□□ 0.8
SSBP4-213ENST00000602088 CDK8P49336 464 aa20.03■□□□□ 0.8
SSBP4-213ENST00000602088 MTMR2Q13614 643 aa20.03■□□□□ 0.8
SSBP4-213ENST00000602088 C17orf99Q6UX52 265 aa20.03■□□□□ 0.8
SSBP4-213ENST00000602088 IFNL3Q8IZI9 196 aa20.03■□□□□ 0.8
SSBP4-213ENST00000602088 HELLSQ9NRZ9 838 aa20.03■□□□□ 0.8
SSBP4-213ENST00000602088 ADGRA2Q96PE1 1338 aa20.02■□□□□ 0.8
SSBP4-213ENST00000602088 C19orf81C9J6K1 198 aa20.02■□□□□ 0.8
SSBP4-213ENST00000602088 GUCY1A2P33402 732 aa20.02■□□□□ 0.8
SSBP4-213ENST00000602088 RAB3GAP1Q15042 981 aa20.02■□□□□ 0.8
SSBP4-213ENST00000602088 TREML2Q5T2D2 321 aa20.02■□□□□ 0.8
SSBP4-213ENST00000602088 IFFO2Q5TF58 517 aa20.02■□□□□ 0.8
SSBP4-213ENST00000602088 PARK7Q99497 189 aaKnown RBP20.02■□□□□ 0.8
SSBP4-213ENST00000602088 LOC285556D6RIA3 1793 aa20.01■□□□□ 0.79
SSBP4-213ENST00000602088 MPHOSPH10O00566 681 aaKnown RBP20.01■□□□□ 0.79
SSBP4-213ENST00000602088 CYP2C8P10632 490 aa20.01■□□□□ 0.79
SSBP4-213ENST00000602088 TDO2P48775 406 aa20.01■□□□□ 0.79
SSBP4-213ENST00000602088 CCDC129Q6ZRS4 1044 aa20.01■□□□□ 0.79
SSBP4-213ENST00000602088 CD99L2Q8TCZ2 262 aa20.01■□□□□ 0.79
SSBP4-213ENST00000602088 ERO1AQ96HE7 468 aa20.01■□□□□ 0.79
SSBP4-213ENST00000602088 FAM227BQ96M60 508 aa20.01■□□□□ 0.79
SSBP4-213ENST00000602088 NACAP1Q9BZK3 213 aa20.01■□□□□ 0.79
SSBP4-213ENST00000602088 A0A0D9SFI3 127 aa20■□□□□ 0.79
SSBP4-213ENST00000602088 MINDY4BA8MYZ0 360 aa20■□□□□ 0.79
SSBP4-213ENST00000602088 FOXP2O15409 715 aa20■□□□□ 0.79
SSBP4-213ENST00000602088 SDSP20132 328 aa20■□□□□ 0.79
SSBP4-213ENST00000602088 NMIQ13287 307 aaPredicted RBP20■□□□□ 0.79
SSBP4-213ENST00000602088 SEPT2Q15019 361 aa20■□□□□ 0.79
SSBP4-213ENST00000602088 CCDC17Q96LX7 622 aa20■□□□□ 0.79
SSBP4-213ENST00000602088 CPA4Q9UI42 421 aa20■□□□□ 0.79
SSBP4-213ENST00000602088 MYH8P13535 1937 aa20■□□□□ 0.79
SSBP4-213ENST00000602088 ROBO3Q96MS0 1386 aa19.99■□□□□ 0.79
SSBP4-213ENST00000602088 AKR1B1P15121 316 aa19.99■□□□□ 0.79
SSBP4-213ENST00000602088 PABPC4Q13310 644 aaKnown RBP eCLIP19.99■□□□□ 0.79
SSBP4-213ENST00000602088 PKN2Q16513 984 aaKnown RBP19.99■□□□□ 0.79
SSBP4-213ENST00000602088 MCMDC2Q4G0Z9 681 aa19.99■□□□□ 0.79
SSBP4-213ENST00000602088 TMEM179Q6ZVK1 233 aa19.99■□□□□ 0.79
SSBP4-213ENST00000602088 ABHD8Q96I13 439 aa19.99■□□□□ 0.79
SSBP4-213ENST00000602088 TMOD4Q9NZQ9 345 aa19.99■□□□□ 0.79
SSBP4-213ENST00000602088 CAP1Q01518 475 aa19.98■□□□□ 0.79
SSBP4-213ENST00000602088 TTC22Q5TAA0 569 aa19.98■□□□□ 0.79
SSBP4-213ENST00000602088 USP17L2Q6R6M4 530 aa19.98■□□□□ 0.79
SSBP4-213ENST00000602088 OTOP1Q7RTM1 612 aa19.98■□□□□ 0.79
SSBP4-213ENST00000602088 ACER1Q8TDN7 264 aa19.98■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms