RNA–Protein interactions for RNA: ENST00000601953.5

CAPN12-212, Transcript of calpain 12, humanhuman

TSL 5 BASIC

Gene CAPN12, Length 2,381 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN12-212ENST00000601953 RAB21Q9UL25 225 aa25.3■■□□□ 1.64
CAPN12-212ENST00000601953 SLC3A2P08195 630 aaKnown RBP25.3■■□□□ 1.64
CAPN12-212ENST00000601953 LMOD1P29536 600 aaPredicted RBP25.3■■□□□ 1.64
CAPN12-212ENST00000601953 NDUFA8P51970 172 aa25.3■■□□□ 1.64
CAPN12-212ENST00000601953 UBASH3AP57075 661 aa25.3■■□□□ 1.64
CAPN12-212ENST00000601953 OTUD7BQ6GQQ9 843 aa25.3■■□□□ 1.64
CAPN12-212ENST00000601953 LAMB2P55268 1798 aa25.29■■□□□ 1.64
CAPN12-212ENST00000601953 SPATA31A5Q5VU36 1347 aa25.29■■□□□ 1.64
CAPN12-212ENST00000601953 SPATA31A7Q8IWB4 1347 aa25.29■■□□□ 1.64
CAPN12-212ENST00000601953 AXDND1Q5T1B0 1012 aaPredicted RBP25.29■■□□□ 1.64
CAPN12-212ENST00000601953 EFCAB13Q8IY85 973 aa25.29■■□□□ 1.64
CAPN12-212ENST00000601953 NKX2-3Q8TAU0 364 aa25.29■■□□□ 1.64
CAPN12-212ENST00000601953 HSD3B7Q9H2F3 369 aa25.29■■□□□ 1.64
CAPN12-212ENST00000601953 POLR3EQ9NVU0 708 aa25.29■■□□□ 1.64
CAPN12-212ENST00000601953 MYH14Q7Z406 1995 aaKnown RBP25.29■■□□□ 1.64
CAPN12-212ENST00000601953 MYO1BO43795 1136 aa25.29■■□□□ 1.64
CAPN12-212ENST00000601953 IGHMBP2P38935 993 aaKnown RBP25.29■■□□□ 1.64
CAPN12-212ENST00000601953 TUBB4BP68371 445 aa25.29■■□□□ 1.64
CAPN12-212ENST00000601953 FAM177A1Q8N128 213 aaPredicted RBP25.29■■□□□ 1.64
CAPN12-212ENST00000601953 MAGEB6Q8N7X4 407 aa25.29■■□□□ 1.64
CAPN12-212ENST00000601953 LINC00301Q8NCQ3 95 aa25.29■■□□□ 1.64
CAPN12-212ENST00000601953 TOMM22Q9NS69 142 aa25.29■■□□□ 1.64
CAPN12-212ENST00000601953 NIP7Q9Y221 180 aaKnown RBP eCLIP25.29■■□□□ 1.64
CAPN12-212ENST00000601953 A0A1B0GVL5 298 aa25.28■■□□□ 1.64
CAPN12-212ENST00000601953 ERLIN1O75477 346 aa25.28■■□□□ 1.64
CAPN12-212ENST00000601953 YEATS4O95619 227 aa25.28■■□□□ 1.64
CAPN12-212ENST00000601953 EPB41L4AQ9HCS5 686 aaPredicted RBP25.28■■□□□ 1.64
CAPN12-212ENST00000601953 B4E1Z4 1266 aa25.27■■□□□ 1.64
CAPN12-212ENST00000601953 SNAP23O00161 211 aa25.27■■□□□ 1.64
CAPN12-212ENST00000601953 MCM6Q14566 821 aa25.27■■□□□ 1.64
CAPN12-212ENST00000601953 APOA5Q6Q788 366 aa25.27■■□□□ 1.64
CAPN12-212ENST00000601953 RAB11FIP4Q86YS3 637 aa25.27■■□□□ 1.64
CAPN12-212ENST00000601953 IFNL3Q8IZI9 196 aa25.27■■□□□ 1.64
CAPN12-212ENST00000601953 A0A0G2JS52 829 aa25.27■■□□□ 1.64
CAPN12-212ENST00000601953 CDKL5O76039 1030 aa25.27■■□□□ 1.64
CAPN12-212ENST00000601953 TOP1P11387 765 aaKnown RBP25.27■■□□□ 1.64
CAPN12-212ENST00000601953 METAP2P50579 478 aaKnown RBP eCLIP25.27■■□□□ 1.64
CAPN12-212ENST00000601953 MYSM1Q5VVJ2 828 aa25.27■■□□□ 1.64
CAPN12-212ENST00000601953 MMS22LQ6ZRQ5 1243 aa25.27■■□□□ 1.64
CAPN12-212ENST00000601953 BARGINQ6ZT62 677 aa25.27■■□□□ 1.64
CAPN12-212ENST00000601953 CCDC91Q7Z6B0 441 aa25.27■■□□□ 1.64
CAPN12-212ENST00000601953 KCNG4Q8TDN1 519 aa25.27■■□□□ 1.64
CAPN12-212ENST00000601953 IGDCC4Q8TDY8 1250 aa25.27■■□□□ 1.64
CAPN12-212ENST00000601953 DHX58Q96C10 678 aa25.27■■□□□ 1.64
CAPN12-212ENST00000601953 L1RE1Q9UN81 338 aa25.27■■□□□ 1.64
CAPN12-212ENST00000601953 MBD4O95243 580 aa25.26■■□□□ 1.63
CAPN12-212ENST00000601953 ATP1A3P13637 1013 aa25.26■■□□□ 1.63
CAPN12-212ENST00000601953 LRRC31Q6UY01 552 aa25.26■■□□□ 1.63
CAPN12-212ENST00000601953 SRGAP1Q7Z6B7 1085 aa25.26■■□□□ 1.63
CAPN12-212ENST00000601953 SGMS1Q86VZ5 419 aa25.26■■□□□ 1.63
CAPN12-212ENST00000601953 MSANTD4Q8NCY6 345 aa25.26■■□□□ 1.63
CAPN12-212ENST00000601953 FAM71BQ8TC56 605 aa25.26■■□□□ 1.63
CAPN12-212ENST00000601953 FAN1Q9Y2M0 1017 aa25.26■■□□□ 1.63
CAPN12-212ENST00000601953 CLGNO14967 610 aa25.26■■□□□ 1.63
CAPN12-212ENST00000601953 CHMP4BP1P59074 171 aa25.26■■□□□ 1.63
CAPN12-212ENST00000601953 KIF23Q02241 960 aaPredicted RBP25.26■■□□□ 1.63
CAPN12-212ENST00000601953 MCTP2Q6DN12 878 aa25.26■■□□□ 1.63
CAPN12-212ENST00000601953 SMARCC1Q92922 1105 aaPredicted RBP25.26■■□□□ 1.63
CAPN12-212ENST00000601953 NAPBQ9H115 298 aa25.26■■□□□ 1.63
CAPN12-212ENST00000601953 STX10O60499 249 aa25.25■■□□□ 1.63
CAPN12-212ENST00000601953 CEP89Q96ST8 783 aa25.25■■□□□ 1.63
CAPN12-212ENST00000601953 SERPINC1P01008 464 aa25.25■■□□□ 1.63
CAPN12-212ENST00000601953 POLR3DP05423 398 aaPredicted RBP25.25■■□□□ 1.63
CAPN12-212ENST00000601953 ANKZF1Q9H8Y5 726 aa25.25■■□□□ 1.63
CAPN12-212ENST00000601953 CLIC4Q9Y696 253 aa25.25■■□□□ 1.63
CAPN12-212ENST00000601953 PNPLA7Q6ZV29 1317 aa25.25■■□□□ 1.63
CAPN12-212ENST00000601953 GNAT2P19087 354 aa25.24■■□□□ 1.63
CAPN12-212ENST00000601953 LIFRP42702 1097 aa25.24■■□□□ 1.63
CAPN12-212ENST00000601953 STK38Q15208 465 aa25.24■■□□□ 1.63
CAPN12-212ENST00000601953 CFAP100Q494V2 611 aa25.24■■□□□ 1.63
CAPN12-212ENST00000601953 CPLX2Q6PUV4 134 aaKnown RBP25.24■■□□□ 1.63
CAPN12-212ENST00000601953 DPF2Q92785 391 aa25.24■■□□□ 1.63
CAPN12-212ENST00000601953 BAG1Q99933 345 aaPredicted RBP25.24■■□□□ 1.63
CAPN12-212ENST00000601953 LY9Q9HBG7 655 aa25.24■■□□□ 1.63
CAPN12-212ENST00000601953 ZNF652Q9Y2D9 606 aa25.24■■□□□ 1.63
CAPN12-212ENST00000601953 TIAM2Q8IVF5 1701 aa25.24■■□□□ 1.63
CAPN12-212ENST00000601953 GSG1L2A8MUP6 293 aa25.24■■□□□ 1.63
CAPN12-212ENST00000601953 BIN1O00499 593 aa25.24■■□□□ 1.63
CAPN12-212ENST00000601953 BCAMP50895 628 aa25.24■■□□□ 1.63
CAPN12-212ENST00000601953 GSCP56915 257 aaPredicted RBP25.24■■□□□ 1.63
CAPN12-212ENST00000601953 CNNM2Q9H8M5 875 aa25.24■■□□□ 1.63
CAPN12-212ENST00000601953 ARMT1Q9H993 441 aa25.24■■□□□ 1.63
CAPN12-212ENST00000601953 KIF28PB7ZC32 967 aa25.23■■□□□ 1.63
CAPN12-212ENST00000601953 CUTAO60888 179 aa25.23■■□□□ 1.63
CAPN12-212ENST00000601953 PPFIA4O75335 1185 aa25.23■■□□□ 1.63
CAPN12-212ENST00000601953 CHRNDQ07001 517 aa25.23■■□□□ 1.63
CAPN12-212ENST00000601953 CEP112Q8N8E3 955 aa25.23■■□□□ 1.63
CAPN12-212ENST00000601953 GJB4Q9NTQ9 266 aa25.23■■□□□ 1.63
CAPN12-212ENST00000601953 BCL9LQ86UU0 1499 aa25.23■■□□□ 1.63
CAPN12-212ENST00000601953 ZBTB43O43298 467 aa25.23■■□□□ 1.63
CAPN12-212ENST00000601953 MYL5Q02045 173 aa25.23■■□□□ 1.63
CAPN12-212ENST00000601953 HSP90B2PQ58FF3 399 aa25.23■■□□□ 1.63
CAPN12-212ENST00000601953 CLEC4GQ6UXB4 293 aa25.23■■□□□ 1.63
CAPN12-212ENST00000601953 RNF216Q9NWF9 866 aaPredicted RBP25.23■■□□□ 1.63
CAPN12-212ENST00000601953 SF3A1Q15459 793 aaKnown RBP25.22■■□□□ 1.63
CAPN12-212ENST00000601953 SYNE3Q6ZMZ3 975 aa25.22■■□□□ 1.63
CAPN12-212ENST00000601953 FAM107BQ9H098 131 aa25.22■■□□□ 1.63
CAPN12-212ENST00000601953 SENP2Q9HC62 589 aa25.22■■□□□ 1.63
CAPN12-212ENST00000601953 MED4Q9NPJ6 270 aa25.22■■□□□ 1.63
CAPN12-212ENST00000601953 A0A087WUV0 522 aaPredicted RBP25.22■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms