RNA–Protein interactions for RNA: ENST00000601009.1

FARP1-232, Transcript of FERM, ARH/RhoGEF and pleckstrin domain protein 1, humanhuman

TSL 5

Gene FARP1, Length 667 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FARP1-232ENST00000601009 ZBTB40Q9NUA8 1239 aa11.15□□□□□ -0.62
FARP1-232ENST00000601009 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.15□□□□□ -0.62
FARP1-232ENST00000601009 SAP30BPQ9UHR5 308 aaKnown RBP11.15□□□□□ -0.62
FARP1-232ENST00000601009 PALD1Q9ULE6 856 aa11.15□□□□□ -0.62
FARP1-232ENST00000601009 COG6Q9Y2V7 657 aa11.15□□□□□ -0.62
FARP1-232ENST00000601009 SIPA1L1O43166 1804 aa11.14□□□□□ -0.63
FARP1-232ENST00000601009 USP17L10C9JJH3 530 aa11.14□□□□□ -0.63
FARP1-232ENST00000601009 ADCY3O60266 1144 aa11.14□□□□□ -0.63
FARP1-232ENST00000601009 DYNLL1P63167 89 aaKnown RBP11.14□□□□□ -0.63
FARP1-232ENST00000601009 IRF5Q13568 498 aa11.14□□□□□ -0.63
FARP1-232ENST00000601009 MTMR2Q13614 643 aa11.14□□□□□ -0.63
FARP1-232ENST00000601009 PXYLP1Q8TE99 480 aa11.14□□□□□ -0.63
FARP1-232ENST00000601009 CRNKL1Q9BZJ0 848 aaKnown RBP11.14□□□□□ -0.63
FARP1-232ENST00000601009 ASCC2Q9H1I8 757 aaPredicted RBP11.14□□□□□ -0.63
FARP1-232ENST00000601009 EHD4Q9H223 541 aa11.14□□□□□ -0.63
FARP1-232ENST00000601009 SERPINB13Q9UIV8 391 aa11.14□□□□□ -0.63
FARP1-232ENST00000601009 ZBTB21Q9ULJ3 1066 aa11.14□□□□□ -0.63
FARP1-232ENST00000601009 MAGEB6P1A0A0J9YX57 407 aa11.13□□□□□ -0.63
FARP1-232ENST00000601009 APBB1O00213 710 aa11.13□□□□□ -0.63
FARP1-232ENST00000601009 GDF11O95390 407 aa11.13□□□□□ -0.63
FARP1-232ENST00000601009 GJB1P08034 283 aa11.13□□□□□ -0.63
FARP1-232ENST00000601009 CCL5P13501 91 aa11.13□□□□□ -0.63
FARP1-232ENST00000601009 HOXA7P31268 230 aaPredicted RBP11.13□□□□□ -0.63
FARP1-232ENST00000601009 FLT3LGP49771 235 aa11.13□□□□□ -0.63
FARP1-232ENST00000601009 PDE3AQ14432 1141 aa11.13□□□□□ -0.63
FARP1-232ENST00000601009 SLC9C2Q5TAH2 1124 aa11.13□□□□□ -0.63
FARP1-232ENST00000601009 CCAR1Q8IX12 1150 aaKnown RBP11.13□□□□□ -0.63
FARP1-232ENST00000601009 DNAJC2Q99543 621 aaKnown RBP11.13□□□□□ -0.63
FARP1-232ENST00000601009 FEZ1Q99689 392 aa11.13□□□□□ -0.63
FARP1-232ENST00000601009 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.13□□□□□ -0.63
FARP1-232ENST00000601009 RNF208Q9H0X6 261 aa11.13□□□□□ -0.63
FARP1-232ENST00000601009 DNAJC18Q9H819 358 aa11.13□□□□□ -0.63
FARP1-232ENST00000601009 CABP5Q9NP86 173 aa11.13□□□□□ -0.63
FARP1-232ENST00000601009 CEP290O15078 2479 aa11.12□□□□□ -0.63
FARP1-232ENST00000601009 POLR3DP05423 398 aaPredicted RBP11.12□□□□□ -0.63
FARP1-232ENST00000601009 GJA8P48165 433 aa11.12□□□□□ -0.63
FARP1-232ENST00000601009 USP14P54578 494 aa11.12□□□□□ -0.63
FARP1-232ENST00000601009 RRP1BQ14684 758 aaKnown RBP11.12□□□□□ -0.63
FARP1-232ENST00000601009 MTFR1Q15390 333 aa11.12□□□□□ -0.63
FARP1-232ENST00000601009 USP17L2Q6R6M4 530 aa11.12□□□□□ -0.63
FARP1-232ENST00000601009 AMOTL1Q8IY63 956 aa11.12□□□□□ -0.63
FARP1-232ENST00000601009 HTATIP2Q9BUP3 242 aa11.12□□□□□ -0.63
FARP1-232ENST00000601009 ANTXR1Q9H6X2 564 aa11.12□□□□□ -0.63
FARP1-232ENST00000601009 TAOK2Q9UL54 1235 aa11.12□□□□□ -0.63
FARP1-232ENST00000601009 GABRQQ9UN88 632 aa11.12□□□□□ -0.63
FARP1-232ENST00000601009 NDUFB9Q9Y6M9 179 aa11.12□□□□□ -0.63
FARP1-232ENST00000601009 NAV1Q8NEY1 1877 aa11.12□□□□□ -0.63
FARP1-232ENST00000601009 GOLIM4O00461 696 aa11.11□□□□□ -0.63
FARP1-232ENST00000601009 GH2P01242 217 aa11.11□□□□□ -0.63
FARP1-232ENST00000601009 INHAP05111 366 aa11.11□□□□□ -0.63
FARP1-232ENST00000601009 PDE6AP16499 860 aa11.11□□□□□ -0.63
FARP1-232ENST00000601009 ABCB5Q2M3G0 1257 aa11.11□□□□□ -0.63
FARP1-232ENST00000601009 CERKLQ49MI3 558 aaPredicted RBP11.11□□□□□ -0.63
FARP1-232ENST00000601009 TATDN1Q6P1N9 297 aa11.11□□□□□ -0.63
FARP1-232ENST00000601009 GPRC5AQ8NFJ5 357 aa11.11□□□□□ -0.63
FARP1-232ENST00000601009 DDRGK1Q96HY6 314 aa11.11□□□□□ -0.63
FARP1-232ENST00000601009 BCL11AQ9H165 835 aa11.11□□□□□ -0.63
FARP1-232ENST00000601009 CWC22Q9HCG8 908 aaKnown RBP11.11□□□□□ -0.63
FARP1-232ENST00000601009 PAG1Q9NWQ8 432 aa11.11□□□□□ -0.63
FARP1-232ENST00000601009 MORF4L1Q9UBU8 362 aa11.11□□□□□ -0.63
FARP1-232ENST00000601009 ZNF532Q9HCE3 1301 aa11.1□□□□□ -0.63
FARP1-232ENST00000601009 DOCK3Q8IZD9 2030 aa11.1□□□□□ -0.63
FARP1-232ENST00000601009 HMGCRP04035 888 aa11.1□□□□□ -0.63
FARP1-232ENST00000601009 ATP5JP18859 108 aa11.1□□□□□ -0.63
FARP1-232ENST00000601009 MAPK4P31152 587 aa11.1□□□□□ -0.63
FARP1-232ENST00000601009 HERVK_113P62684 666 aa11.1□□□□□ -0.63
FARP1-232ENST00000601009 RAB3GAP1Q15042 981 aa11.1□□□□□ -0.63
FARP1-232ENST00000601009 ZSCAN25Q6NSZ9 544 aa11.1□□□□□ -0.63
FARP1-232ENST00000601009 TRMT44Q8IYL2 757 aaKnown RBP11.1□□□□□ -0.63
FARP1-232ENST00000601009 U2AF1L4Q8WU68 220 aaKnown RBP11.1□□□□□ -0.63
FARP1-232ENST00000601009 SOCS4Q8WXH5 440 aa11.1□□□□□ -0.63
FARP1-232ENST00000601009 GPATCH3Q96I76 525 aa11.1□□□□□ -0.63
FARP1-232ENST00000601009 RIOK1Q9BRS2 568 aaKnown RBP11.1□□□□□ -0.63
FARP1-232ENST00000601009 LRRCC1Q9C099 1032 aa11.1□□□□□ -0.63
FARP1-232ENST00000601009 MCM9Q9NXL9 1143 aa11.1□□□□□ -0.63
FARP1-232ENST00000601009 USP17L15C9J2P7 530 aa11.09□□□□□ -0.63
FARP1-232ENST00000601009 USP17L13C9JLJ4 530 aa11.09□□□□□ -0.63
FARP1-232ENST00000601009 USP17L11C9JVI0 530 aa11.09□□□□□ -0.63
FARP1-232ENST00000601009 USP17L18D6R9N7 530 aa11.09□□□□□ -0.63
FARP1-232ENST00000601009 USP17L22D6RA61 530 aa11.09□□□□□ -0.63
FARP1-232ENST00000601009 USP17L17D6RBQ6 530 aa11.09□□□□□ -0.63
FARP1-232ENST00000601009 USP17L19D6RCP7 530 aa11.09□□□□□ -0.63
FARP1-232ENST00000601009 USP17L20D6RJB6 530 aa11.09□□□□□ -0.63
FARP1-232ENST00000601009 GLRX3O76003 335 aaKnown RBP11.09□□□□□ -0.63
FARP1-232ENST00000601009 FARP2O94887 1054 aaPredicted RBP11.09□□□□□ -0.63
FARP1-232ENST00000601009 SGPL1O95470 568 aa11.09□□□□□ -0.63
FARP1-232ENST00000601009 ELNP15502 786 aa11.09□□□□□ -0.63
FARP1-232ENST00000601009 CCNA1P78396 465 aa11.09□□□□□ -0.63
FARP1-232ENST00000601009 USP17L24Q0WX57 530 aa11.09□□□□□ -0.63
FARP1-232ENST00000601009 SIRT2Q8IXJ6 389 aa11.09□□□□□ -0.63
FARP1-232ENST00000601009 DPF3Q92784 378 aa11.09□□□□□ -0.63
FARP1-232ENST00000601009 SHISA4Q96DD7 197 aa11.09□□□□□ -0.63
FARP1-232ENST00000601009 C12orf42Q96LP6 360 aa11.09□□□□□ -0.63
FARP1-232ENST00000601009 NUDT12Q9BQG2 462 aa11.09□□□□□ -0.63
FARP1-232ENST00000601009 KIAA1683Q9H0B3 1180 aa11.09□□□□□ -0.63
FARP1-232ENST00000601009 UNC93B1Q9H1C4 597 aa11.09□□□□□ -0.63
FARP1-232ENST00000601009 ATP8A2Q9NTI2 1148 aa11.09□□□□□ -0.63
FARP1-232ENST00000601009 SWAP70Q9UH65 585 aa11.09□□□□□ -0.63
FARP1-232ENST00000601009 DDX60LQ5H9U9 1706 aaKnown RBP11.09□□□□□ -0.63
FARP1-232ENST00000601009 MYH7P12883 1935 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms