RNA–Protein interactions for RNA: ENST00000600910.5

PNKP-215, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5 BASIC

Gene PNKP, Length 1,600 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-215ENST00000600910 TSPY2A6NKD2 308 aa24.16■■□□□ 1.46
PNKP-215ENST00000600910 PHF20L1A8MW92 1017 aa24.16■■□□□ 1.46
PNKP-215ENST00000600910 CPA1P15085 419 aa24.16■■□□□ 1.46
PNKP-215ENST00000600910 TFAP4Q01664 338 aa24.16■■□□□ 1.46
PNKP-215ENST00000600910 BLOC1S2Q6QNY1 142 aa24.16■■□□□ 1.46
PNKP-215ENST00000600910 CYB5R4Q7L1T6 521 aa24.16■■□□□ 1.46
PNKP-215ENST00000600910 ZNF408Q9H9D4 720 aa24.16■■□□□ 1.46
PNKP-215ENST00000600910 ZSWIM6Q9HCJ5 1215 aa24.16■■□□□ 1.46
PNKP-215ENST00000600910 PPP1R12BO60237 982 aaPredicted RBP24.15■■□□□ 1.46
PNKP-215ENST00000600910 HMGB1P09429 215 aaKnown RBP24.15■■□□□ 1.46
PNKP-215ENST00000600910 AKR1B1P15121 316 aa24.15■■□□□ 1.46
PNKP-215ENST00000600910 SMC1BQ8NDV3 1235 aa24.15■■□□□ 1.46
PNKP-215ENST00000600910 CCDC17Q96LX7 622 aa24.15■■□□□ 1.46
PNKP-215ENST00000600910 UPF3BQ9BZI7 483 aaKnown RBP24.15■■□□□ 1.46
PNKP-215ENST00000600910 USP2O75604 605 aaPredicted RBP24.14■■□□□ 1.46
PNKP-215ENST00000600910 TOMM70O94826 608 aa24.14■■□□□ 1.46
PNKP-215ENST00000600910 GDF11O95390 407 aa24.14■■□□□ 1.46
PNKP-215ENST00000600910 TSPY3P0CV98 308 aa24.14■■□□□ 1.46
PNKP-215ENST00000600910 TSPY8P0CW00 308 aa24.14■■□□□ 1.46
PNKP-215ENST00000600910 NT5C2P49902 561 aa24.14■■□□□ 1.46
PNKP-215ENST00000600910 CHST3Q7LGC8 479 aa24.14■■□□□ 1.46
PNKP-215ENST00000600910 KLRG1Q96E93 195 aa24.14■■□□□ 1.46
PNKP-215ENST00000600910 ZNF112Q9UJU3 913 aa24.14■■□□□ 1.46
PNKP-215ENST00000600910 MPHOSPH10O00566 681 aaKnown RBP24.13■■□□□ 1.45
PNKP-215ENST00000600910 MCM5P33992 734 aa24.13■■□□□ 1.45
PNKP-215ENST00000600910 SHROOM1Q2M3G4 852 aaPredicted RBP24.13■■□□□ 1.45
PNKP-215ENST00000600910 RUFY3Q7L099 469 aa24.13■■□□□ 1.45
PNKP-215ENST00000600910 DHX32Q7L7V1 743 aaKnown RBP24.13■■□□□ 1.45
PNKP-215ENST00000600910 WRNIP1Q96S55 665 aa24.13■■□□□ 1.45
PNKP-215ENST00000600910 CYP46A1Q9Y6A2 500 aa24.13■■□□□ 1.45
PNKP-215ENST00000600910 RPS6KB1P23443 525 aa24.13■■□□□ 1.45
PNKP-215ENST00000600910 CAP2P40123 477 aa24.13■■□□□ 1.45
PNKP-215ENST00000600910 ANTXR2P58335 489 aa24.13■■□□□ 1.45
PNKP-215ENST00000600910 ABCB5Q2M3G0 1257 aa24.13■■□□□ 1.45
PNKP-215ENST00000600910 RBM46Q8TBY0 533 aaKnown RBP24.13■■□□□ 1.45
PNKP-215ENST00000600910 TCEANC2Q96MN5 208 aa24.13■■□□□ 1.45
PNKP-215ENST00000600910 PRC1O43663 620 aa24.12■■□□□ 1.45
PNKP-215ENST00000600910 INPP5BP32019 993 aa24.12■■□□□ 1.45
PNKP-215ENST00000600910 JAG1P78504 1218 aa24.12■■□□□ 1.45
PNKP-215ENST00000600910 TTLL12Q14166 644 aaPredicted RBP24.12■■□□□ 1.45
PNKP-215ENST00000600910 NEDD1Q8NHV4 660 aa24.12■■□□□ 1.45
PNKP-215ENST00000600910 ZKSCAN3Q9BRR0 538 aa24.12■■□□□ 1.45
PNKP-215ENST00000600910 ANGEL1Q9UNK9 670 aaKnown RBP24.12■■□□□ 1.45
PNKP-215ENST00000600910 CTNND1O60716 968 aaKnown RBP24.11■■□□□ 1.45
PNKP-215ENST00000600910 CELF2O95319 508 aaKnown RBP24.11■■□□□ 1.45
PNKP-215ENST00000600910 EXOSC10Q01780 885 aaKnown RBP24.11■■□□□ 1.45
PNKP-215ENST00000600910 MOB2Q70IA6 237 aa24.11■■□□□ 1.45
PNKP-215ENST00000600910 IQCA1Q86XH1 822 aa24.11■■□□□ 1.45
PNKP-215ENST00000600910 DDX55Q8NHQ9 600 aaKnown RBP eCLIP24.11■■□□□ 1.453e-6■■■■■ 38.3
PNKP-215ENST00000600910 GNL3Q9BVP2 549 aaKnown RBP eCLIP24.11■■□□□ 1.45
PNKP-215ENST00000600910 PLIN4Q96Q06 1357 aa24.1■■□□□ 1.45
PNKP-215ENST00000600910 NMT2O60551 498 aa24.1■■□□□ 1.45
PNKP-215ENST00000600910 GH2P01242 217 aa24.1■■□□□ 1.45
PNKP-215ENST00000600910 IREB2P48200 963 aaKnown RBP24.1■■□□□ 1.45
PNKP-215ENST00000600910 RABEP1Q15276 862 aa24.1■■□□□ 1.45
PNKP-215ENST00000600910 ZKSCAN4Q969J2 545 aaPredicted RBP24.1■■□□□ 1.45
PNKP-215ENST00000600910 LRRC2Q9BYS8 371 aa24.1■■□□□ 1.45
PNKP-215ENST00000600910 CABP5Q9NP86 173 aa24.1■■□□□ 1.45
PNKP-215ENST00000600910 NEK4P51957 841 aa24.1■■□□□ 1.45
PNKP-215ENST00000600910 TMEM179Q6ZVK1 233 aa24.1■■□□□ 1.45
PNKP-215ENST00000600910 ARMC9Q7Z3E5 817 aa24.1■■□□□ 1.45
PNKP-215ENST00000600910 UBAC1Q9BSL1 405 aa24.1■■□□□ 1.45
PNKP-215ENST00000600910 IL17RBQ9NRM6 502 aa24.1■■□□□ 1.45
PNKP-215ENST00000600910 ZBTB21Q9ULJ3 1066 aa24.1■■□□□ 1.45
PNKP-215ENST00000600910 GREB1LQ9C091 1923 aaPredicted RBP24.09■■□□□ 1.45
PNKP-215ENST00000600910 PASKQ96RG2 1323 aa24.09■■□□□ 1.45
PNKP-215ENST00000600910 MAP3K11Q16584 847 aa24.09■■□□□ 1.45
PNKP-215ENST00000600910 ZSCAN10Q96SZ4 725 aaPredicted RBP24.09■■□□□ 1.45
PNKP-215ENST00000600910 TCP11L1Q9NUJ3 509 aa24.09■■□□□ 1.45
PNKP-215ENST00000600910 ATAD5Q96QE3 1844 aa24.09■■□□□ 1.45
PNKP-215ENST00000600910 WDR19Q8NEZ3 1342 aa24.08■■□□□ 1.45
PNKP-215ENST00000600910 PAPPA2Q9BXP8 1791 aa24.08■■□□□ 1.45
PNKP-215ENST00000600910 OTOFQ9HC10 1997 aa24.08■■□□□ 1.45
PNKP-215ENST00000600910 ASNSP08243 561 aa24.08■■□□□ 1.45
PNKP-215ENST00000600910 GUCY1A2P33402 732 aa24.08■■□□□ 1.45
PNKP-215ENST00000600910 MAP3K9P80192 1104 aa24.08■■□□□ 1.45
PNKP-215ENST00000600910 SEPT2Q15019 361 aa24.08■■□□□ 1.45
PNKP-215ENST00000600910 RAB3GAP1Q15042 981 aa24.08■■□□□ 1.45
PNKP-215ENST00000600910 CST9Q5W186 159 aa24.08■■□□□ 1.45
PNKP-215ENST00000600910 SCYL3Q8IZE3 742 aa24.08■■□□□ 1.45
PNKP-215ENST00000600910 GBA2Q9HCG7 927 aaPredicted RBP24.08■■□□□ 1.45
PNKP-215ENST00000600910 PDRG1Q9NUG6 133 aa24.08■■□□□ 1.45
PNKP-215ENST00000600910 FRMD4AQ9P2Q2 1039 aaPredicted RBP24.08■■□□□ 1.45
PNKP-215ENST00000600910 TRPM7Q96QT4 1865 aa24.08■■□□□ 1.45
PNKP-215ENST00000600910 TNKSO95271 1327 aa24.08■■□□□ 1.44
PNKP-215ENST00000600910 DOCK1Q14185 1865 aa24.07■■□□□ 1.44
PNKP-215ENST00000600910 IGKV6D-41A0A0C4DH26 115 aa24.07■■□□□ 1.44
PNKP-215ENST00000600910 IFIT3O14879 490 aaKnown RBP24.07■■□□□ 1.44
PNKP-215ENST00000600910 SART3Q15020 963 aaKnown RBP24.07■■□□□ 1.44
PNKP-215ENST00000600910 PPP1R3FQ6ZSY5 799 aaPredicted RBP24.07■■□□□ 1.44
PNKP-215ENST00000600910 CLEC10AQ8IUN9 316 aa24.07■■□□□ 1.44
PNKP-215ENST00000600910 CEP95Q96GE4 821 aa24.07■■□□□ 1.44
PNKP-215ENST00000600910 TMEM87BQ96K49 555 aa24.07■■□□□ 1.44
PNKP-215ENST00000600910 FKBP1BP68106 108 aa24.06■■□□□ 1.44
PNKP-215ENST00000600910 VGLL4Q14135 290 aa24.06■■□□□ 1.44
PNKP-215ENST00000600910 Q6ZUG5 572 aa24.06■■□□□ 1.44
PNKP-215ENST00000600910 C2orf69Q8N8R5 385 aa24.06■■□□□ 1.44
PNKP-215ENST00000600910 IGDCC4Q8TDY8 1250 aa24.06■■□□□ 1.44
PNKP-215ENST00000600910 MTA3Q9BTC8 594 aa24.06■■□□□ 1.44
PNKP-215ENST00000600910 GPHNQ9NQX3 736 aaPredicted RBP24.06■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms