RNA–Protein interactions for RNA: ENST00000600879.5

HIF3A-219, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 4

Gene HIF3A, Length 576 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-219ENST00000600879 ATAD5Q96QE3 1844 aa12.32□□□□□ -0.44
HIF3A-219ENST00000600879 MYCNP04198 464 aaPredicted RBP12.32□□□□□ -0.44
HIF3A-219ENST00000600879 UBTFL1P0CB47 393 aaPredicted RBP12.32□□□□□ -0.44
HIF3A-219ENST00000600879 FOSL2P15408 326 aa12.32□□□□□ -0.44
HIF3A-219ENST00000600879 CNGA1P29973 690 aa12.32□□□□□ -0.44
HIF3A-219ENST00000600879 IL15P40933 162 aaPredicted RBP12.32□□□□□ -0.44
HIF3A-219ENST00000600879 RTP1P59025 263 aa12.32□□□□□ -0.44
HIF3A-219ENST00000600879 HERVK_113P62684 666 aa12.32□□□□□ -0.44
HIF3A-219ENST00000600879 SH3D19Q5HYK7 790 aa12.32□□□□□ -0.44
HIF3A-219ENST00000600879 ANO1Q5XXA6 986 aa12.32□□□□□ -0.44
HIF3A-219ENST00000600879 GPR142Q7Z601 462 aa12.32□□□□□ -0.44
HIF3A-219ENST00000600879 USP6NLQ92738 828 aa12.32□□□□□ -0.44
HIF3A-219ENST00000600879 CWC22Q9HCG8 908 aaKnown RBP12.32□□□□□ -0.44
HIF3A-219ENST00000600879 A0A1B0GUL7 405 aa12.31□□□□□ -0.44
HIF3A-219ENST00000600879 GDF11O95390 407 aa12.31□□□□□ -0.44
HIF3A-219ENST00000600879 XRCC5P13010 732 aaKnown RBP12.31□□□□□ -0.44
HIF3A-219ENST00000600879 RGS2P41220 211 aa12.31□□□□□ -0.44
HIF3A-219ENST00000600879 MORN1Q5T089 497 aa12.31□□□□□ -0.44
HIF3A-219ENST00000600879 GJC2Q5T442 439 aaPredicted RBP12.31□□□□□ -0.44
HIF3A-219ENST00000600879 WDR78Q5VTH9 848 aa12.31□□□□□ -0.44
HIF3A-219ENST00000600879 TEX11Q8IYF3 940 aa12.31□□□□□ -0.44
HIF3A-219ENST00000600879 BADQ92934 168 aa12.31□□□□□ -0.44
HIF3A-219ENST00000600879 XAGE2Q96GT9 111 aa12.31□□□□□ -0.44
HIF3A-219ENST00000600879 RAI14Q9P0K7 980 aa12.31□□□□□ -0.44
HIF3A-219ENST00000600879 FBXO3Q9UK99 471 aa12.31□□□□□ -0.44
HIF3A-219ENST00000600879 MAPK4P31152 587 aa12.3□□□□□ -0.44
HIF3A-219ENST00000600879 BACE1P56817 501 aa12.3□□□□□ -0.44
HIF3A-219ENST00000600879 ERVK-9P63128 1117 aa12.3□□□□□ -0.44
HIF3A-219ENST00000600879 ERVK-24P63145 666 aa12.3□□□□□ -0.44
HIF3A-219ENST00000600879 TFCP2Q12800 502 aa12.3□□□□□ -0.44
HIF3A-219ENST00000600879 SH3RF1Q7Z6J0 888 aa12.3□□□□□ -0.44
HIF3A-219ENST00000600879 PLEKHH3Q7Z736 793 aa12.3□□□□□ -0.44
HIF3A-219ENST00000600879 TRPV1Q8NER1 839 aa12.3□□□□□ -0.44
HIF3A-219ENST00000600879 SH3RF3Q8TEJ3 882 aaPredicted RBP12.3□□□□□ -0.44
HIF3A-219ENST00000600879 NSUN4Q96CB9 384 aaKnown RBP12.3□□□□□ -0.44
HIF3A-219ENST00000600879 NEUROD6Q96NK8 337 aa12.3□□□□□ -0.44
HIF3A-219ENST00000600879 APBA2Q99767 749 aa12.3□□□□□ -0.44
HIF3A-219ENST00000600879 TBC1D2Q9BYX2 928 aa12.3□□□□□ -0.44
HIF3A-219ENST00000600879 HMG20BQ9P0W2 317 aa12.3□□□□□ -0.44
HIF3A-219ENST00000600879 PRKAG2Q9UGJ0 569 aa12.3□□□□□ -0.44
HIF3A-219ENST00000600879 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.3□□□□□ -0.44
HIF3A-219ENST00000600879 MAST2Q6P0Q8 1798 aa12.29□□□□□ -0.44
HIF3A-219ENST00000600879 NPM3O75607 178 aaKnown RBP12.29□□□□□ -0.44
HIF3A-219ENST00000600879 LDHCP07864 332 aa12.29□□□□□ -0.44
HIF3A-219ENST00000600879 CYP2C19P33261 490 aa12.29□□□□□ -0.44
HIF3A-219ENST00000600879 GSTO1P78417 241 aa12.29□□□□□ -0.44
HIF3A-219ENST00000600879 ZYXQ15942 572 aaKnown RBP12.29□□□□□ -0.44
HIF3A-219ENST00000600879 TRIM60Q495X7 471 aa12.29□□□□□ -0.44
HIF3A-219ENST00000600879 MAPKAPK5Q8IW41 473 aa12.29□□□□□ -0.44
HIF3A-219ENST00000600879 TRMT44Q8IYL2 757 aaKnown RBP12.29□□□□□ -0.44
HIF3A-219ENST00000600879 WDR18Q9BV38 432 aa12.29□□□□□ -0.44
HIF3A-219ENST00000600879 HERC5Q9UII4 1024 aaKnown RBP12.29□□□□□ -0.44
HIF3A-219ENST00000600879 PDS5AQ29RF7 1337 aaKnown RBP12.29□□□□□ -0.44
HIF3A-219ENST00000600879 USP17L10C9JJH3 530 aa12.28□□□□□ -0.44
HIF3A-219ENST00000600879 HOXA7P31268 230 aaPredicted RBP12.28□□□□□ -0.44
HIF3A-219ENST00000600879 EPHB4P54760 987 aa12.28□□□□□ -0.44
HIF3A-219ENST00000600879 MVPQ14764 893 aaKnown RBP12.28□□□□□ -0.44
HIF3A-219ENST00000600879 GORABQ5T7V8 394 aa12.28□□□□□ -0.44
HIF3A-219ENST00000600879 CRACR2BQ8N4Y2 399 aaPredicted RBP12.28□□□□□ -0.44
HIF3A-219ENST00000600879 SPATA5Q8NB90 893 aa12.28□□□□□ -0.44
HIF3A-219ENST00000600879 PPM1EQ8WY54 764 aa12.28□□□□□ -0.44
HIF3A-219ENST00000600879 FERMT2Q96AC1 680 aa12.28□□□□□ -0.44
HIF3A-219ENST00000600879 DNAJC18Q9H819 358 aa12.28□□□□□ -0.44
HIF3A-219ENST00000600879 COPRSQ9NQ92 184 aa12.28□□□□□ -0.44
HIF3A-219ENST00000600879 SMC4Q9NTJ3 1288 aa12.28□□□□□ -0.44
HIF3A-219ENST00000600879 AATFQ9NY61 560 aaKnown RBP eCLIP12.28□□□□□ -0.44
HIF3A-219ENST00000600879 DDX20Q9UHI6 824 aaKnown RBP12.28□□□□□ -0.44
HIF3A-219ENST00000600879 LTBP2Q14767 1821 aa12.27□□□□□ -0.44
HIF3A-219ENST00000600879 MUC3AQ02505 3323 aa12.27□□□□□ -0.44
HIF3A-219ENST00000600879 TMEM265A0A087WTH1 108 aa12.27□□□□□ -0.45
HIF3A-219ENST00000600879 TRIM43BA6NCK2 446 aa12.27□□□□□ -0.45
HIF3A-219ENST00000600879 TNFRSF10AO00220 468 aa12.27□□□□□ -0.45
HIF3A-219ENST00000600879 CNMDO75829 334 aa12.27□□□□□ -0.45
HIF3A-219ENST00000600879 ASNSP08243 561 aa12.27□□□□□ -0.45
HIF3A-219ENST00000600879 MAP2K5Q13163 448 aa12.27□□□□□ -0.45
HIF3A-219ENST00000600879 GRIN2CQ14957 1233 aa12.27□□□□□ -0.45
HIF3A-219ENST00000600879 MFSD14CQ5VZR4 134 aa12.27□□□□□ -0.45
HIF3A-219ENST00000600879 NPLOC4Q8TAT6 608 aa12.27□□□□□ -0.45
HIF3A-219ENST00000600879 TRIM43Q96BQ3 446 aaPredicted RBP12.27□□□□□ -0.45
HIF3A-219ENST00000600879 EDC3Q96F86 508 aaKnown RBP12.27□□□□□ -0.45
HIF3A-219ENST00000600879 MEIS3Q99687 375 aa12.27□□□□□ -0.45
HIF3A-219ENST00000600879 NOL10Q9BSC4 688 aaKnown RBP12.27□□□□□ -0.45
HIF3A-219ENST00000600879 TRIM34Q9BYJ4 488 aa12.27□□□□□ -0.45
HIF3A-219ENST00000600879 EMILIN3Q9NT22 766 aa12.27□□□□□ -0.45
HIF3A-219ENST00000600879 LRP2BPQ9P2M1 347 aa12.27□□□□□ -0.45
HIF3A-219ENST00000600879 PI4KBQ9UBF8 816 aa12.27□□□□□ -0.45
HIF3A-219ENST00000600879 SAP30BPQ9UHR5 308 aaKnown RBP12.27□□□□□ -0.45
HIF3A-219ENST00000600879 ZBTB21Q9ULJ3 1066 aa12.27□□□□□ -0.45
HIF3A-219ENST00000600879 SIPA1L1O43166 1804 aa12.27□□□□□ -0.45
HIF3A-219ENST00000600879 FRMPD3Q5JV73 1810 aa12.26□□□□□ -0.45
HIF3A-219ENST00000600879 TTC28Q96AY4 2481 aa12.26□□□□□ -0.45
HIF3A-219ENST00000600879 ITGB8P26012 769 aa12.26□□□□□ -0.45
HIF3A-219ENST00000600879 TGFBRAP1Q8WUH2 860 aa12.26□□□□□ -0.45
HIF3A-219ENST00000600879 LPAR1Q92633 364 aa12.26□□□□□ -0.45
HIF3A-219ENST00000600879 SNRKQ9NRH2 765 aa12.26□□□□□ -0.45
HIF3A-219ENST00000600879 PALD1Q9ULE6 856 aa12.26□□□□□ -0.45
HIF3A-219ENST00000600879 AKAP2Q9Y2D5 859 aa12.26□□□□□ -0.45
HIF3A-219ENST00000600879 ZNF521Q96K83 1311 aa12.26□□□□□ -0.45
HIF3A-219ENST00000600879 C19orf81C9J6K1 198 aa12.25□□□□□ -0.45
HIF3A-219ENST00000600879 DNM1LO00429 736 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms