RNA–Protein interactions for RNA: ENST00000600791.5

SHKBP1-226, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 494 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-226ENST00000600791 TNPO2O14787 897 aaKnown RBP18.27■□□□□ 0.52
SHKBP1-226ENST00000600791 RAB11FIP3O75154 756 aa18.27■□□□□ 0.52
SHKBP1-226ENST00000600791 SLC34A2O95436 690 aa18.27■□□□□ 0.52
SHKBP1-226ENST00000600791 IFIT2P09913 472 aaKnown RBP18.27■□□□□ 0.52
SHKBP1-226ENST00000600791 BACE1P56817 501 aa18.27■□□□□ 0.52
SHKBP1-226ENST00000600791 PABPC4Q13310 644 aaKnown RBP eCLIP18.27■□□□□ 0.52
SHKBP1-226ENST00000600791 FAM110CQ1W6H9 321 aa18.27■□□□□ 0.52
SHKBP1-226ENST00000600791 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.27■□□□□ 0.52
SHKBP1-226ENST00000600791 RIOK1Q9BRS2 568 aaKnown RBP18.27■□□□□ 0.52
SHKBP1-226ENST00000600791 BCL11AQ9H165 835 aa18.27■□□□□ 0.52
SHKBP1-226ENST00000600791 ASCC2Q9H1I8 757 aaPredicted RBP18.27■□□□□ 0.52
SHKBP1-226ENST00000600791 GINM1Q9NU53 330 aa18.27■□□□□ 0.52
SHKBP1-226ENST00000600791 PDE6AP16499 860 aa18.26■□□□□ 0.51
SHKBP1-226ENST00000600791 PDE3AQ14432 1141 aa18.26■□□□□ 0.51
SHKBP1-226ENST00000600791 SLAIN1Q8ND83 568 aa18.26■□□□□ 0.51
SHKBP1-226ENST00000600791 DNAJC2Q99543 621 aaKnown RBP18.26■□□□□ 0.51
SHKBP1-226ENST00000600791 EHD4Q9H223 541 aa18.26■□□□□ 0.51
SHKBP1-226ENST00000600791 DOCK3Q8IZD9 2030 aa18.25■□□□□ 0.51
SHKBP1-226ENST00000600791 MAGEB6P1A0A0J9YX57 407 aa18.25■□□□□ 0.51
SHKBP1-226ENST00000600791 GOLIM4O00461 696 aa18.25■□□□□ 0.51
SHKBP1-226ENST00000600791 GCLCP48506 637 aaPredicted RBP18.25■□□□□ 0.51
SHKBP1-226ENST00000600791 FLT3LGP49771 235 aa18.25■□□□□ 0.51
SHKBP1-226ENST00000600791 SLC9C2Q5TAH2 1124 aa18.25■□□□□ 0.51
SHKBP1-226ENST00000600791 SHISA4Q96DD7 197 aa18.25■□□□□ 0.51
SHKBP1-226ENST00000600791 TMOD4Q9NZQ9 345 aa18.25■□□□□ 0.51
SHKBP1-226ENST00000600791 SERPINB13Q9UIV8 391 aa18.25■□□□□ 0.51
SHKBP1-226ENST00000600791 USP17L10C9JJH3 530 aa18.24■□□□□ 0.51
SHKBP1-226ENST00000600791 GH2P01242 217 aa18.24■□□□□ 0.51
SHKBP1-226ENST00000600791 CCL5P13501 91 aa18.24■□□□□ 0.51
SHKBP1-226ENST00000600791 TATDN1Q6P1N9 297 aa18.24■□□□□ 0.51
SHKBP1-226ENST00000600791 EDC3Q96F86 508 aaKnown RBP18.24■□□□□ 0.51
SHKBP1-226ENST00000600791 BIN2Q9UBW5 565 aaPredicted RBP18.24■□□□□ 0.51
SHKBP1-226ENST00000600791 CEP290O15078 2479 aa18.24■□□□□ 0.51
SHKBP1-226ENST00000600791 ZNF532Q9HCE3 1301 aa18.23■□□□□ 0.51
SHKBP1-226ENST00000600791 TCRBV5S4A2TA0A5A2 114 aa18.23■□□□□ 0.51
SHKBP1-226ENST00000600791 C19orf81C9J6K1 198 aa18.23■□□□□ 0.51
SHKBP1-226ENST00000600791 ADCY3O60266 1144 aa18.23■□□□□ 0.51
SHKBP1-226ENST00000600791 ELNP15502 786 aa18.23■□□□□ 0.51
SHKBP1-226ENST00000600791 UBXN2AP68543 259 aa18.23■□□□□ 0.51
SHKBP1-226ENST00000600791 IRX3P78415 501 aaPredicted RBP18.23■□□□□ 0.51
SHKBP1-226ENST00000600791 IRF5Q13568 498 aa18.23■□□□□ 0.51
SHKBP1-226ENST00000600791 TTC6Q86TZ1 520 aa18.23■□□□□ 0.51
SHKBP1-226ENST00000600791 COA7Q96BR5 231 aa18.23■□□□□ 0.51
SHKBP1-226ENST00000600791 HOXA7P31268 230 aaPredicted RBP18.22■□□□□ 0.51
SHKBP1-226ENST00000600791 PLCD1P51178 756 aa18.22■□□□□ 0.51
SHKBP1-226ENST00000600791 PXYLP1Q8TE99 480 aa18.22■□□□□ 0.51
SHKBP1-226ENST00000600791 CRNKL1Q9BZJ0 848 aaKnown RBP18.22■□□□□ 0.51
SHKBP1-226ENST00000600791 RNF208Q9H0X6 261 aa18.22■□□□□ 0.51
SHKBP1-226ENST00000600791 PAG1Q9NWQ8 432 aa18.22■□□□□ 0.51
SHKBP1-226ENST00000600791 INHAP05111 366 aa18.21■□□□□ 0.51
SHKBP1-226ENST00000600791 GJB1P08034 283 aa18.21■□□□□ 0.51
SHKBP1-226ENST00000600791 ATP5JP18859 108 aa18.21■□□□□ 0.51
SHKBP1-226ENST00000600791 GJA8P48165 433 aa18.21■□□□□ 0.51
SHKBP1-226ENST00000600791 LCORLQ8N3X6 602 aa18.21■□□□□ 0.51
SHKBP1-226ENST00000600791 BOLA2Q9H3K6 86 aa18.21■□□□□ 0.51
SHKBP1-226ENST00000600791 EMILIN3Q9NT22 766 aa18.21■□□□□ 0.51
SHKBP1-226ENST00000600791 MORF4L1Q9UBU8 362 aa18.21■□□□□ 0.51
SHKBP1-226ENST00000600791 MYH7P12883 1935 aa18.2■□□□□ 0.5
SHKBP1-226ENST00000600791 SHMT1P34896 483 aa18.2■□□□□ 0.5
SHKBP1-226ENST00000600791 HERVK_113P62684 666 aa18.2■□□□□ 0.5
SHKBP1-226ENST00000600791 EVX2Q03828 476 aa18.2■□□□□ 0.5
SHKBP1-226ENST00000600791 CERKLQ49MI3 558 aaPredicted RBP18.2■□□□□ 0.5
SHKBP1-226ENST00000600791 NKX2-3Q8TAU0 364 aa18.2■□□□□ 0.5
SHKBP1-226ENST00000600791 SDR42E1Q8WUS8 393 aa18.2■□□□□ 0.5
SHKBP1-226ENST00000600791 P2RX7Q99572 595 aaKnown RBP18.2■□□□□ 0.5
SHKBP1-226ENST00000600791 LRRCC1Q9C099 1032 aa18.2■□□□□ 0.5
SHKBP1-226ENST00000600791 UNC93B1Q9H1C4 597 aa18.2■□□□□ 0.5
SHKBP1-226ENST00000600791 MCM9Q9NXL9 1143 aa18.2■□□□□ 0.5
SHKBP1-226ENST00000600791 TAOK2Q9UL54 1235 aa18.2■□□□□ 0.5
SHKBP1-226ENST00000600791 PLXNB2O15031 1838 aa18.19■□□□□ 0.5
SHKBP1-226ENST00000600791 PEX10O60683 326 aa18.19■□□□□ 0.5
SHKBP1-226ENST00000600791 POLR3DP05423 398 aaPredicted RBP18.19■□□□□ 0.5
SHKBP1-226ENST00000600791 ADD2P35612 726 aa18.19■□□□□ 0.5
SHKBP1-226ENST00000600791 GABPAQ06546 454 aa18.19■□□□□ 0.5
SHKBP1-226ENST00000600791 RAB3GAP1Q15042 981 aa18.19■□□□□ 0.5
SHKBP1-226ENST00000600791 ABCB5Q2M3G0 1257 aa18.19■□□□□ 0.5
SHKBP1-226ENST00000600791 SLFNL1Q499Z3 407 aa18.19■□□□□ 0.5
SHKBP1-226ENST00000600791 USP17L2Q6R6M4 530 aa18.19■□□□□ 0.5
SHKBP1-226ENST00000600791 FEZ1Q99689 392 aa18.19■□□□□ 0.5
SHKBP1-226ENST00000600791 HAUS7Q99871 368 aa18.19■□□□□ 0.5
SHKBP1-226ENST00000600791 TXNRD2Q9NNW7 524 aa18.19■□□□□ 0.5
SHKBP1-226ENST00000600791 SMARCA5O60264 1052 aaPredicted RBP18.18■□□□□ 0.5
SHKBP1-226ENST00000600791 ZYXQ15942 572 aaKnown RBP18.18■□□□□ 0.5
SHKBP1-226ENST00000600791 U2AF1L4Q8WU68 220 aaKnown RBP18.18■□□□□ 0.5
SHKBP1-226ENST00000600791 C12orf42Q96LP6 360 aa18.18■□□□□ 0.5
SHKBP1-226ENST00000600791 ARMT1Q9H993 441 aa18.18■□□□□ 0.5
SHKBP1-226ENST00000600791 DCP1AQ9NPI6 582 aaPredicted RBP18.18■□□□□ 0.5
SHKBP1-226ENST00000600791 MBD4O95243 580 aa18.17■□□□□ 0.5
SHKBP1-226ENST00000600791 CHGBP05060 677 aa18.17■□□□□ 0.5
SHKBP1-226ENST00000600791 GUCY1A2P33402 732 aa18.17■□□□□ 0.5
SHKBP1-226ENST00000600791 UBE2Q1Q7Z7E8 422 aa18.17■□□□□ 0.5
SHKBP1-226ENST00000600791 ACER1Q8TDN7 264 aa18.17■□□□□ 0.5
SHKBP1-226ENST00000600791 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.17■□□□□ 0.51e-6■■■■□ 20.5
SHKBP1-226ENST00000600791 KIAA1683Q9H0B3 1180 aa18.17■□□□□ 0.5
SHKBP1-226ENST00000600791 CABP5Q9NP86 173 aa18.17■□□□□ 0.5
SHKBP1-226ENST00000600791 GJD2Q9UKL4 321 aa18.17■□□□□ 0.5
SHKBP1-226ENST00000600791 BAZ2AQ9UIF9 1905 aaKnown RBP18.16■□□□□ 0.5
SHKBP1-226ENST00000600791 CYP2D6P10635 497 aa18.16■□□□□ 0.5
SHKBP1-226ENST00000600791 POTEEQ6S8J3 1075 aa18.16■□□□□ 0.5
SHKBP1-226ENST00000600791 GPRC5AQ8NFJ5 357 aa18.16■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms