RNA–Protein interactions for RNA: ENST00000600453.1

IRF3-226, Transcript of interferon regulatory factor 3, humanhuman

TSL 3

Gene IRF3, Length 700 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-226ENST00000600453 AAMPQ13685 434 aa18.89■□□□□ 0.61
IRF3-226ENST00000600453 CERKLQ49MI3 558 aaPredicted RBP18.89■□□□□ 0.61
IRF3-226ENST00000600453 DDRGK1Q96HY6 314 aa18.89■□□□□ 0.61
IRF3-226ENST00000600453 ARHGAP39Q9C0H5 1083 aa18.89■□□□□ 0.61
IRF3-226ENST00000600453 ATP8A2Q9NTI2 1148 aa18.89■□□□□ 0.61
IRF3-226ENST00000600453 MCM9Q9NXL9 1143 aa18.89■□□□□ 0.61
IRF3-226ENST00000600453 FRMD4AQ9P2Q2 1039 aaPredicted RBP18.89■□□□□ 0.61
IRF3-226ENST00000600453 ZBTB47Q9UFB7 747 aaPredicted RBP18.89■□□□□ 0.61
IRF3-226ENST00000600453 ZBTB21Q9ULJ3 1066 aa18.89■□□□□ 0.61
IRF3-226ENST00000600453 PTCH2Q9Y6C5 1203 aa18.89■□□□□ 0.61
IRF3-226ENST00000600453 PTPRFP10586 1907 aa18.89■□□□□ 0.61
IRF3-226ENST00000600453 ATAD5Q96QE3 1844 aa18.88■□□□□ 0.61
IRF3-226ENST00000600453 AMOTL1Q8IY63 956 aa18.88■□□□□ 0.61
IRF3-226ENST00000600453 EDC3Q96F86 508 aaKnown RBP18.88■□□□□ 0.61
IRF3-226ENST00000600453 TRIM47Q96LD4 638 aa18.88■□□□□ 0.61
IRF3-226ENST00000600453 YTHDC1Q96MU7 727 aaKnown RBP18.88■□□□□ 0.61
IRF3-226ENST00000600453 KIAA0100Q14667 2235 aaKnown RBP18.88■□□□□ 0.61
IRF3-226ENST00000600453 GDF11O95390 407 aa18.87■□□□□ 0.61
IRF3-226ENST00000600453 HOXA7P31268 230 aaPredicted RBP18.87■□□□□ 0.61
IRF3-226ENST00000600453 SLC4A8Q2Y0W8 1093 aa18.87■□□□□ 0.61
IRF3-226ENST00000600453 LRRFIP1Q32MZ4 808 aaKnown RBP18.87■□□□□ 0.61
IRF3-226ENST00000600453 TREML2Q5T2D2 321 aa18.87■□□□□ 0.61
IRF3-226ENST00000600453 RAET1EQ8TD07 263 aa18.87■□□□□ 0.61
IRF3-226ENST00000600453 ZNF333Q96JL9 665 aa18.87■□□□□ 0.61
IRF3-226ENST00000600453 ERC2O15083 957 aa18.86■□□□□ 0.61
IRF3-226ENST00000600453 GH2P01242 217 aa18.86■□□□□ 0.61
IRF3-226ENST00000600453 USP14P54578 494 aa18.86■□□□□ 0.61
IRF3-226ENST00000600453 IRX3P78415 501 aaPredicted RBP18.86■□□□□ 0.61
IRF3-226ENST00000600453 MTMR2Q13614 643 aa18.86■□□□□ 0.61
IRF3-226ENST00000600453 FAM110CQ1W6H9 321 aa18.86■□□□□ 0.61
IRF3-226ENST00000600453 ABCB5Q2M3G0 1257 aa18.86■□□□□ 0.61
IRF3-226ENST00000600453 USP17L2Q6R6M4 530 aa18.86■□□□□ 0.61
IRF3-226ENST00000600453 DCP1AQ9NPI6 582 aaPredicted RBP18.86■□□□□ 0.61
IRF3-226ENST00000600453 SWAP70Q9UH65 585 aa18.86■□□□□ 0.61
IRF3-226ENST00000600453 PCDHB15Q9Y5E8 787 aa18.86■□□□□ 0.61
IRF3-226ENST00000600453 SIPA1L1O43166 1804 aa18.86■□□□□ 0.61
IRF3-226ENST00000600453 MYPNQ86TC9 1320 aa18.85■□□□□ 0.61
IRF3-226ENST00000600453 PLCD1P51178 756 aa18.85■□□□□ 0.61
IRF3-226ENST00000600453 LCORLQ8N3X6 602 aa18.85■□□□□ 0.61
IRF3-226ENST00000600453 ANKRD13CQ8N6S4 541 aa18.85■□□□□ 0.61
IRF3-226ENST00000600453 COA7Q96BR5 231 aa18.85■□□□□ 0.61
IRF3-226ENST00000600453 ASCC2Q9H1I8 757 aaPredicted RBP18.85■□□□□ 0.61
IRF3-226ENST00000600453 ARMT1Q9H993 441 aa18.85■□□□□ 0.61
IRF3-226ENST00000600453 TTC41PQ6P2S7 1318 aa18.84■□□□□ 0.61
IRF3-226ENST00000600453 TNPO2O14787 897 aaKnown RBP18.84■□□□□ 0.61
IRF3-226ENST00000600453 MBD4O95243 580 aa18.84■□□□□ 0.61
IRF3-226ENST00000600453 ZFYP08048 801 aaPredicted RBP18.84■□□□□ 0.61
IRF3-226ENST00000600453 JAG1P78504 1218 aa18.84■□□□□ 0.61
IRF3-226ENST00000600453 GTF3C2Q8WUA4 911 aaPredicted RBP18.84■□□□□ 0.61
IRF3-226ENST00000600453 SDR42E1Q8WUS8 393 aa18.84■□□□□ 0.61
IRF3-226ENST00000600453 PDE4DIPQ5VU43 2346 aa18.83■□□□□ 0.61
IRF3-226ENST00000600453 ECM2O94769 699 aaPredicted RBP18.83■□□□□ 0.6
IRF3-226ENST00000600453 CTGFP29279 349 aa18.83■□□□□ 0.6
IRF3-226ENST00000600453 GRK4P32298 578 aa18.83■□□□□ 0.6
IRF3-226ENST00000600453 GABPAQ06546 454 aa18.83■□□□□ 0.6
IRF3-226ENST00000600453 RAB3GAP1Q15042 981 aa18.83■□□□□ 0.6
IRF3-226ENST00000600453 KBTBD3Q8NAB2 608 aa18.83■□□□□ 0.6
IRF3-226ENST00000600453 SHMT1P34896 483 aa18.82■□□□□ 0.6
IRF3-226ENST00000600453 UBXN2AP68543 259 aa18.82■□□□□ 0.6
IRF3-226ENST00000600453 GCC1Q96CN9 775 aa18.82■□□□□ 0.6
IRF3-226ENST00000600453 CRBNQ96SW2 442 aa18.82■□□□□ 0.6
IRF3-226ENST00000600453 FEZ1Q99689 392 aa18.82■□□□□ 0.6
IRF3-226ENST00000600453 BIN2Q9UBW5 565 aaPredicted RBP18.82■□□□□ 0.6
IRF3-226ENST00000600453 SLC4A4Q9Y6R1 1079 aa18.82■□□□□ 0.6
IRF3-226ENST00000600453 GLRX3O76003 335 aaKnown RBP18.81■□□□□ 0.6
IRF3-226ENST00000600453 SLAIN1Q8ND83 568 aa18.81■□□□□ 0.6
IRF3-226ENST00000600453 SH3TC2Q8TF17 1288 aa18.81■□□□□ 0.6
IRF3-226ENST00000600453 C12orf42Q96LP6 360 aa18.81■□□□□ 0.6
IRF3-226ENST00000600453 CCDC17Q96LX7 622 aa18.81■□□□□ 0.6
IRF3-226ENST00000600453 P2RX7Q99572 595 aaKnown RBP18.81■□□□□ 0.6
IRF3-226ENST00000600453 KIAA1683Q9H0B3 1180 aa18.81■□□□□ 0.6
IRF3-226ENST00000600453 EMILIN3Q9NT22 766 aa18.81■□□□□ 0.6
IRF3-226ENST00000600453 MGAMO43451 1857 aa18.81■□□□□ 0.6
IRF3-226ENST00000600453 LOC285556D6RIA3 1793 aa18.81■□□□□ 0.6
IRF3-226ENST00000600453 MYH7P12883 1935 aa18.8■□□□□ 0.6
IRF3-226ENST00000600453 POTEFA5A3E0 1075 aa18.8■□□□□ 0.6
IRF3-226ENST00000600453 USP17L15C9J2P7 530 aa18.8■□□□□ 0.6
IRF3-226ENST00000600453 USP17L13C9JLJ4 530 aa18.8■□□□□ 0.6
IRF3-226ENST00000600453 USP17L11C9JVI0 530 aa18.8■□□□□ 0.6
IRF3-226ENST00000600453 USP17L18D6R9N7 530 aa18.8■□□□□ 0.6
IRF3-226ENST00000600453 USP17L22D6RA61 530 aa18.8■□□□□ 0.6
IRF3-226ENST00000600453 USP17L17D6RBQ6 530 aa18.8■□□□□ 0.6
IRF3-226ENST00000600453 USP17L19D6RCP7 530 aa18.8■□□□□ 0.6
IRF3-226ENST00000600453 USP17L20D6RJB6 530 aa18.8■□□□□ 0.6
IRF3-226ENST00000600453 MPHOSPH10O00566 681 aaKnown RBP18.8■□□□□ 0.6
IRF3-226ENST00000600453 RNF113AO15541 343 aaKnown RBP18.8■□□□□ 0.6
IRF3-226ENST00000600453 PRKAB2O43741 272 aa18.8■□□□□ 0.6
IRF3-226ENST00000600453 PRKCZQ05513 592 aa18.8■□□□□ 0.6
IRF3-226ENST00000600453 USP17L24Q0WX57 530 aa18.8■□□□□ 0.6
IRF3-226ENST00000600453 IRF5Q13568 498 aa18.8■□□□□ 0.6
IRF3-226ENST00000600453 C12orf60Q5U649 245 aa18.8■□□□□ 0.6
IRF3-226ENST00000600453 NKX2-3Q8TAU0 364 aa18.8■□□□□ 0.6
IRF3-226ENST00000600453 PXYLP1Q8TE99 480 aa18.8■□□□□ 0.6
IRF3-226ENST00000600453 PUS7LQ9H0K6 701 aaKnown RBP18.8■□□□□ 0.6
IRF3-226ENST00000600453 MORF4L1Q9UBU8 362 aa18.8■□□□□ 0.6
IRF3-226ENST00000600453 USP17L12C9JPN9 530 aa18.79■□□□□ 0.6
IRF3-226ENST00000600453 USP17L21D6R901 530 aa18.79■□□□□ 0.6
IRF3-226ENST00000600453 CAPN2P17655 700 aa18.79■□□□□ 0.6
IRF3-226ENST00000600453 GNAT2P19087 354 aa18.79■□□□□ 0.6
IRF3-226ENST00000600453 FLT3LGP49771 235 aa18.79■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms