RNA–Protein interactions for RNA: ENST00000600343.5

NFKB1-212, Transcript of nuclear factor kappa B subunit 1, humanhuman

TSL 2 BASIC

Gene NFKB1, Length 4,010 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-212ENST00000600343 SPECC1LQ69YQ0 1117 aa11.04□□□□□ -0.64
NFKB1-212ENST00000600343 TAX1BP1Q86VP1 789 aa11.04□□□□□ -0.64
NFKB1-212ENST00000600343 C17orf50Q8WW18 174 aa11.04□□□□□ -0.64
NFKB1-212ENST00000600343 MTRQ99707 1265 aa11.04□□□□□ -0.64
NFKB1-212ENST00000600343 SLC5A4Q9NY91 659 aa11.04□□□□□ -0.64
NFKB1-212ENST00000600343 CDK12Q9NYV4 1490 aaPredicted RBP11.04□□□□□ -0.64
NFKB1-212ENST00000600343 HSF2BPO75031 334 aa11.04□□□□□ -0.64
NFKB1-212ENST00000600343 KDM7AQ6ZMT4 941 aa11.04□□□□□ -0.64
NFKB1-212ENST00000600343 USP28Q96RU2 1077 aa11.04□□□□□ -0.64
NFKB1-212ENST00000600343 TRIM7Q9C029 511 aa11.04□□□□□ -0.64
NFKB1-212ENST00000600343 NPHP4O75161 1426 aaPredicted RBP11.04□□□□□ -0.64
NFKB1-212ENST00000600343 STXBP3O00186 592 aa11.04□□□□□ -0.64
NFKB1-212ENST00000600343 JAK2O60674 1132 aa11.04□□□□□ -0.64
NFKB1-212ENST00000600343 ZNF189O75820 626 aaPredicted RBP11.04□□□□□ -0.64
NFKB1-212ENST00000600343 DNAJC8O75937 253 aaPredicted RBP11.04□□□□□ -0.64
NFKB1-212ENST00000600343 TMEM62Q0P6H9 643 aa11.04□□□□□ -0.64
NFKB1-212ENST00000600343 NNTQ13423 1086 aa11.04□□□□□ -0.64
NFKB1-212ENST00000600343 SUN2Q9UH99 717 aa11.04□□□□□ -0.64
NFKB1-212ENST00000600343 C2CD2Q9Y426 696 aa11.04□□□□□ -0.64
NFKB1-212ENST00000600343 KIF5BP33176 963 aa11.03□□□□□ -0.64
NFKB1-212ENST00000600343 ANKRD1Q15327 319 aa11.03□□□□□ -0.64
NFKB1-212ENST00000600343 PNMA8AQ86V59 439 aaPredicted RBP11.03□□□□□ -0.64
NFKB1-212ENST00000600343 DZIP3Q86Y13 1208 aaKnown RBP11.03□□□□□ -0.64
NFKB1-212ENST00000600343 NBPF15Q8N660 670 aa11.03□□□□□ -0.64
NFKB1-212ENST00000600343 PIDD1Q9HB75 910 aa11.03□□□□□ -0.64
NFKB1-212ENST00000600343 AATFQ9NY61 560 aaKnown RBP eCLIP11.03□□□□□ -0.64
NFKB1-212ENST00000600343 DPPA5A6NC42 116 aa11.03□□□□□ -0.64
NFKB1-212ENST00000600343 CLTAP09496 248 aa11.03□□□□□ -0.64
NFKB1-212ENST00000600343 NDUFA8P51970 172 aa11.03□□□□□ -0.64
NFKB1-212ENST00000600343 FOSBP53539 338 aa11.03□□□□□ -0.64
NFKB1-212ENST00000600343 DYNC1I2Q13409 638 aaKnown RBP11.03□□□□□ -0.64
NFKB1-212ENST00000600343 RAD9BQ6WBX8 426 aa11.03□□□□□ -0.64
NFKB1-212ENST00000600343 RRP36Q96EU6 259 aaKnown RBP11.03□□□□□ -0.64
NFKB1-212ENST00000600343 TCEANC2Q96MN5 208 aa11.03□□□□□ -0.64
NFKB1-212ENST00000600343 SIL1Q9H173 461 aa11.03□□□□□ -0.64
NFKB1-212ENST00000600343 INTS13Q9NVM9 706 aa11.03□□□□□ -0.64
NFKB1-212ENST00000600343 ANKIB1Q9P2G1 1089 aa11.03□□□□□ -0.64
NFKB1-212ENST00000600343 CYP27B1O15528 508 aa11.03□□□□□ -0.64
NFKB1-212ENST00000600343 ALDH3A1P30838 453 aa11.03□□□□□ -0.64
NFKB1-212ENST00000600343 ADD1P35611 737 aaKnown RBP11.03□□□□□ -0.64
NFKB1-212ENST00000600343 HSP90AA4PQ58FG1 418 aa11.03□□□□□ -0.64
NFKB1-212ENST00000600343 HVCN1Q96D96 273 aa11.03□□□□□ -0.64
NFKB1-212ENST00000600343 AOX1Q06278 1338 aa11.03□□□□□ -0.64
NFKB1-212ENST00000600343 PDLIM1O00151 329 aa11.02□□□□□ -0.64
NFKB1-212ENST00000600343 ZNF24P17028 368 aa11.02□□□□□ -0.64
NFKB1-212ENST00000600343 SFMBT2Q5VUG0 894 aa11.02□□□□□ -0.64
NFKB1-212ENST00000600343 CNTROBQ8N137 903 aa11.02□□□□□ -0.64
NFKB1-212ENST00000600343 CNKSR1Q969H4 720 aa11.02□□□□□ -0.64
NFKB1-212ENST00000600343 UBE2OQ9C0C9 1292 aaKnown RBP11.02□□□□□ -0.64
NFKB1-212ENST00000600343 PPANQ9NQ55 473 aaKnown RBP11.02□□□□□ -0.64
NFKB1-212ENST00000600343 MAPK8IP1Q9UQF2 711 aa11.02□□□□□ -0.64
NFKB1-212ENST00000600343 N4BP3O15049 544 aa11.02□□□□□ -0.65
NFKB1-212ENST00000600343 SASH1O94885 1247 aa11.02□□□□□ -0.65
NFKB1-212ENST00000600343 ABL2P42684 1182 aa11.02□□□□□ -0.65
NFKB1-212ENST00000600343 PTH1RQ03431 593 aa11.02□□□□□ -0.65
NFKB1-212ENST00000600343 AENQ8WTP8 325 aaKnown RBP11.02□□□□□ -0.65
NFKB1-212ENST00000600343 WDR35Q9P2L0 1181 aa11.02□□□□□ -0.65
NFKB1-212ENST00000600343 CNGA1P29973 690 aa11.02□□□□□ -0.65
NFKB1-212ENST00000600343 GJA8P48165 433 aa11.02□□□□□ -0.65
NFKB1-212ENST00000600343 AMPD2Q01433 879 aa11.02□□□□□ -0.65
NFKB1-212ENST00000600343 APBA1Q02410 837 aa11.02□□□□□ -0.65
NFKB1-212ENST00000600343 CCDC15Q0P6D6 951 aa11.02□□□□□ -0.65
NFKB1-212ENST00000600343 Q4G0T1 1027 aa11.02□□□□□ -0.65
NFKB1-212ENST00000600343 HSP90AB4PQ58FF6 505 aa11.02□□□□□ -0.65
NFKB1-212ENST00000600343 L3MBTL3Q96JM7 780 aaPredicted RBP11.02□□□□□ -0.65
NFKB1-212ENST00000600343 TTF2Q9UNY4 1162 aaKnown RBP11.02□□□□□ -0.65
NFKB1-212ENST00000600343 ZC3H13Q5T200 1668 aaKnown RBP11.02□□□□□ -0.65
NFKB1-212ENST00000600343 NSD2O96028 1365 aa11.02□□□□□ -0.65
NFKB1-212ENST00000600343 AKR1B15C9JRZ8 316 aaPredicted RBP11.01□□□□□ -0.65
NFKB1-212ENST00000600343 EIF4BP23588 611 aaKnown RBP11.01□□□□□ -0.65
NFKB1-212ENST00000600343 PSMA5P28066 241 aa11.01□□□□□ -0.65
NFKB1-212ENST00000600343 MDH1P40925 334 aaKnown RBP11.01□□□□□ -0.65
NFKB1-212ENST00000600343 DEUP1Q05D60 604 aa11.01□□□□□ -0.65
NFKB1-212ENST00000600343 LACTB2Q53H82 288 aaPredicted RBP11.01□□□□□ -0.65
NFKB1-212ENST00000600343 NBPF14Q5TI25 921 aa11.01□□□□□ -0.65
NFKB1-212ENST00000600343 ALS2CLQ60I27 953 aa11.01□□□□□ -0.65
NFKB1-212ENST00000600343 CCDC70Q6NSX1 233 aa11.01□□□□□ -0.65
NFKB1-212ENST00000600343 AGAP11Q8TF27 550 aa11.01□□□□□ -0.65
NFKB1-212ENST00000600343 MMS19Q96T76 1030 aa11.01□□□□□ -0.65
NFKB1-212ENST00000600343 DUOX2Q9NRD8 1548 aa11.01□□□□□ -0.65
NFKB1-212ENST00000600343 DESP17661 470 aa11.01□□□□□ -0.65
NFKB1-212ENST00000600343 NR1D1P20393 614 aa11.01□□□□□ -0.65
NFKB1-212ENST00000600343 POLE2P56282 527 aa11.01□□□□□ -0.65
NFKB1-212ENST00000600343 PCMTD2Q9NV79 361 aa11.01□□□□□ -0.65
NFKB1-212ENST00000600343 PCDHA7Q9UN72 937 aa11.01□□□□□ -0.65
NFKB1-212ENST00000600343 NUP153P49790 1475 aaKnown RBP11.01□□□□□ -0.65
NFKB1-212ENST00000600343 TEX9Q8N6V9 391 aa11.01□□□□□ -0.65
NFKB1-212ENST00000600343 CCDC63Q8NA47 563 aa11.01□□□□□ -0.65
NFKB1-212ENST00000600343 DYDC1Q8WWB3 177 aa11.01□□□□□ -0.65
NFKB1-212ENST00000600343 CAPZA3Q96KX2 299 aa11.01□□□□□ -0.65
NFKB1-212ENST00000600343 HINFPQ9BQA5 517 aa11.01□□□□□ -0.65
NFKB1-212ENST00000600343 IL1RAPL2Q9NP60 686 aa11.01□□□□□ -0.65
NFKB1-212ENST00000600343 SPDYE5A6NIY4 337 aa11□□□□□ -0.65
NFKB1-212ENST00000600343 DIAPH1O60610 1272 aaKnown RBP11□□□□□ -0.65
NFKB1-212ENST00000600343 RIPK1Q13546 671 aa11□□□□□ -0.65
NFKB1-212ENST00000600343 BLOC1S2Q6QNY1 142 aa11□□□□□ -0.65
NFKB1-212ENST00000600343 OLFM4Q6UX06 510 aa11□□□□□ -0.65
NFKB1-212ENST00000600343 CAGE1Q8TC20 777 aa11□□□□□ -0.65
NFKB1-212ENST00000600343 INCENPQ9NQS7 918 aa11□□□□□ -0.65
NFKB1-212ENST00000600343 HMGXB3Q12766 1538 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms