RNA–Protein interactions for RNA: ENST00000600284.5

VRK3-221, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 768 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-221ENST00000600284 HOXA7P31268 230 aaPredicted RBP19.16■□□□□ 0.66
VRK3-221ENST00000600284 JAG1P78504 1218 aa19.16■□□□□ 0.66
VRK3-221ENST00000600284 FAM110CQ1W6H9 321 aa19.16■□□□□ 0.66
VRK3-221ENST00000600284 LRRCC1Q9C099 1032 aa19.16■□□□□ 0.66
VRK3-221ENST00000600284 TMOD4Q9NZQ9 345 aa19.16■□□□□ 0.66
VRK3-221ENST00000600284 ZBTB21Q9ULJ3 1066 aa19.16■□□□□ 0.66
VRK3-221ENST00000600284 ZSWIM8A7E2V4 1837 aa19.16■□□□□ 0.66
VRK3-221ENST00000600284 KIAA0100Q14667 2235 aaKnown RBP19.15■□□□□ 0.66
VRK3-221ENST00000600284 USP17L10C9JJH3 530 aa19.15■□□□□ 0.66
VRK3-221ENST00000600284 PRKCZQ05513 592 aa19.15■□□□□ 0.66
VRK3-221ENST00000600284 MTMR2Q13614 643 aa19.15■□□□□ 0.66
VRK3-221ENST00000600284 ANKRD13CQ8N6S4 541 aa19.15■□□□□ 0.66
VRK3-221ENST00000600284 CRNKL1Q9BZJ0 848 aaKnown RBP19.15■□□□□ 0.66
VRK3-221ENST00000600284 ASCC2Q9H1I8 757 aaPredicted RBP19.15■□□□□ 0.66
VRK3-221ENST00000600284 PAG1Q9NWQ8 432 aa19.15■□□□□ 0.66
VRK3-221ENST00000600284 ATAD5Q96QE3 1844 aa19.15■□□□□ 0.66
VRK3-221ENST00000600284 LOC285556D6RIA3 1793 aa19.14■□□□□ 0.66
VRK3-221ENST00000600284 TCRBV5S4A2TA0A5A2 114 aa19.14■□□□□ 0.65
VRK3-221ENST00000600284 TNPO2O14787 897 aaKnown RBP19.14■□□□□ 0.65
VRK3-221ENST00000600284 GDF11O95390 407 aa19.14■□□□□ 0.65
VRK3-221ENST00000600284 SLAIN1Q8ND83 568 aa19.14■□□□□ 0.65
VRK3-221ENST00000600284 HAUS7Q99871 368 aa19.14■□□□□ 0.65
VRK3-221ENST00000600284 BOLA2Q9H3K6 86 aa19.14■□□□□ 0.65
VRK3-221ENST00000600284 ZNF532Q9HCE3 1301 aa19.14■□□□□ 0.65
VRK3-221ENST00000600284 UBXN2AP68543 259 aa19.13■□□□□ 0.65
VRK3-221ENST00000600284 IRF5Q13568 498 aa19.13■□□□□ 0.65
VRK3-221ENST00000600284 PXYLP1Q8TE99 480 aa19.13■□□□□ 0.65
VRK3-221ENST00000600284 COA7Q96BR5 231 aa19.13■□□□□ 0.65
VRK3-221ENST00000600284 DDX24Q9GZR7 859 aaKnown RBP eCLIP19.13■□□□□ 0.654e-7■■■■□ 23.1
VRK3-221ENST00000600284 TAOK2Q9UL54 1235 aa19.13■□□□□ 0.65
VRK3-221ENST00000600284 MYH1P12882 1939 aa19.12■□□□□ 0.65
VRK3-221ENST00000600284 GH2P01242 217 aa19.12■□□□□ 0.65
VRK3-221ENST00000600284 POLR3DP05423 398 aaPredicted RBP19.12■□□□□ 0.65
VRK3-221ENST00000600284 FLT3LGP49771 235 aa19.12■□□□□ 0.65
VRK3-221ENST00000600284 CERKLQ49MI3 558 aaPredicted RBP19.12■□□□□ 0.65
VRK3-221ENST00000600284 NKX2-3Q8TAU0 364 aa19.12■□□□□ 0.65
VRK3-221ENST00000600284 DCTPP1Q9H773 170 aa19.12■□□□□ 0.65
VRK3-221ENST00000600284 GABRQQ9UN88 632 aa19.12■□□□□ 0.65
VRK3-221ENST00000600284 ADD2P35612 726 aa19.11■□□□□ 0.65
VRK3-221ENST00000600284 PLCD1P51178 756 aa19.11■□□□□ 0.65
VRK3-221ENST00000600284 IRX3P78415 501 aaPredicted RBP19.11■□□□□ 0.65
VRK3-221ENST00000600284 USP17L2Q6R6M4 530 aa19.11■□□□□ 0.65
VRK3-221ENST00000600284 EDC3Q96F86 508 aaKnown RBP19.11■□□□□ 0.65
VRK3-221ENST00000600284 BCL11AQ9H165 835 aa19.11■□□□□ 0.65
VRK3-221ENST00000600284 CABP5Q9NP86 173 aa19.11■□□□□ 0.65
VRK3-221ENST00000600284 MORF4L1Q9UBU8 362 aa19.11■□□□□ 0.65
VRK3-221ENST00000600284 BIN2Q9UBW5 565 aaPredicted RBP19.11■□□□□ 0.65
VRK3-221ENST00000600284 MGAMO43451 1857 aa19.11■□□□□ 0.65
VRK3-221ENST00000600284 ADCY3O60266 1144 aa19.1■□□□□ 0.65
VRK3-221ENST00000600284 MYCP01106 439 aaPredicted RBP19.1■□□□□ 0.65
VRK3-221ENST00000600284 USP14P54578 494 aa19.1■□□□□ 0.65
VRK3-221ENST00000600284 GABPAQ06546 454 aa19.1■□□□□ 0.65
VRK3-221ENST00000600284 UBE3CQ15386 1083 aa19.1■□□□□ 0.65
VRK3-221ENST00000600284 MTFR1Q15390 333 aa19.1■□□□□ 0.65
VRK3-221ENST00000600284 ABCB5Q2M3G0 1257 aa19.1■□□□□ 0.65
VRK3-221ENST00000600284 SHROOM1Q2M3G4 852 aaPredicted RBP19.1■□□□□ 0.65
VRK3-221ENST00000600284 GTF3C2Q8WUA4 911 aaPredicted RBP19.1■□□□□ 0.65
VRK3-221ENST00000600284 C12orf42Q96LP6 360 aa19.1■□□□□ 0.65
VRK3-221ENST00000600284 DCP1AQ9NPI6 582 aaPredicted RBP19.1■□□□□ 0.65
VRK3-221ENST00000600284 MCM9Q9NXL9 1143 aa19.1■□□□□ 0.65
VRK3-221ENST00000600284 GJB1P08034 283 aa19.09■□□□□ 0.65
VRK3-221ENST00000600284 CAPN2P17655 700 aa19.09■□□□□ 0.65
VRK3-221ENST00000600284 SHMT1P34896 483 aa19.09■□□□□ 0.65
VRK3-221ENST00000600284 ZSCAN25Q6NSZ9 544 aa19.09■□□□□ 0.65
VRK3-221ENST00000600284 LCORLQ8N3X6 602 aa19.09■□□□□ 0.65
VRK3-221ENST00000600284 P2RX7Q99572 595 aaKnown RBP19.09■□□□□ 0.65
VRK3-221ENST00000600284 EMILIN3Q9NT22 766 aa19.09■□□□□ 0.65
VRK3-221ENST00000600284 ATP8A2Q9NTI2 1148 aa19.09■□□□□ 0.65
VRK3-221ENST00000600284 BRCA2P51587 3418 aa19.08■□□□□ 0.65
VRK3-221ENST00000600284 CCL5P13501 91 aa19.08■□□□□ 0.64
VRK3-221ENST00000600284 GJA8P48165 433 aa19.08■□□□□ 0.64
VRK3-221ENST00000600284 HERVK_113P62684 666 aa19.08■□□□□ 0.64
VRK3-221ENST00000600284 KIAA1683Q9H0B3 1180 aa19.08■□□□□ 0.64
VRK3-221ENST00000600284 ECHDC1Q9NTX5 307 aa19.08■□□□□ 0.64
VRK3-221ENST00000600284 SMARCA5O60264 1052 aaPredicted RBP19.07■□□□□ 0.64
VRK3-221ENST00000600284 RAB3GAP1Q15042 981 aa19.07■□□□□ 0.64
VRK3-221ENST00000600284 GPRC5AQ8NFJ5 357 aa19.07■□□□□ 0.64
VRK3-221ENST00000600284 SDR42E1Q8WUS8 393 aa19.07■□□□□ 0.64
VRK3-221ENST00000600284 RNF208Q9H0X6 261 aa19.07■□□□□ 0.64
VRK3-221ENST00000600284 ARMT1Q9H993 441 aa19.07■□□□□ 0.64
VRK3-221ENST00000600284 SWAP70Q9UH65 585 aa19.07■□□□□ 0.64
VRK3-221ENST00000600284 GPATCH3Q96I76 525 aa19.06■□□□□ 0.64
VRK3-221ENST00000600284 FEZ1Q99689 392 aa19.06■□□□□ 0.64
VRK3-221ENST00000600284 GJD2Q9UKL4 321 aa19.06■□□□□ 0.64
VRK3-221ENST00000600284 MKI67P46013 3256 aaKnown RBP19.05■□□□□ 0.64
VRK3-221ENST00000600284 USP17L15C9J2P7 530 aa19.05■□□□□ 0.64
VRK3-221ENST00000600284 USP17L13C9JLJ4 530 aa19.05■□□□□ 0.64
VRK3-221ENST00000600284 USP17L11C9JVI0 530 aa19.05■□□□□ 0.64
VRK3-221ENST00000600284 USP17L18D6R9N7 530 aa19.05■□□□□ 0.64
VRK3-221ENST00000600284 USP17L22D6RA61 530 aa19.05■□□□□ 0.64
VRK3-221ENST00000600284 USP17L17D6RBQ6 530 aa19.05■□□□□ 0.64
VRK3-221ENST00000600284 USP17L19D6RCP7 530 aa19.05■□□□□ 0.64
VRK3-221ENST00000600284 USP17L20D6RJB6 530 aa19.05■□□□□ 0.64
VRK3-221ENST00000600284 MBD4O95243 580 aa19.05■□□□□ 0.64
VRK3-221ENST00000600284 USP17L24Q0WX57 530 aa19.05■□□□□ 0.64
VRK3-221ENST00000600284 GCC1Q96CN9 775 aa19.05■□□□□ 0.64
VRK3-221ENST00000600284 DDRGK1Q96HY6 314 aa19.05■□□□□ 0.64
VRK3-221ENST00000600284 RBPJLQ9UBG7 517 aa19.05■□□□□ 0.64
VRK3-221ENST00000600284 DDX60LQ5H9U9 1706 aaKnown RBP19.05■□□□□ 0.64
VRK3-221ENST00000600284 INHAP05111 366 aa19.04■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms